RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 NUDCD1Q96RS6 583 aa11.83□□□□□ -0.52
CDRT1-207ENST00000583965 KRT12Q99456 494 aa11.83□□□□□ -0.52
CDRT1-207ENST00000583965 FOXQ1Q9C009 403 aa11.83□□□□□ -0.52
CDRT1-207ENST00000583965 GLOD4Q9HC38 313 aa11.83□□□□□ -0.52
CDRT1-207ENST00000583965 CACNA2D2Q9NY47 1150 aa11.83□□□□□ -0.52
CDRT1-207ENST00000583965 PAK5Q9P286 719 aa11.83□□□□□ -0.52
CDRT1-207ENST00000583965 MMP17Q9ULZ9 603 aa11.83□□□□□ -0.52
CDRT1-207ENST00000583965 SIT1Q9Y3P8 196 aa11.83□□□□□ -0.52
CDRT1-207ENST00000583965 MTF2Q9Y483 593 aaPredicted RBP11.83□□□□□ -0.52
CDRT1-207ENST00000583965 CACNA1IQ9P0X4 2223 aa11.83□□□□□ -0.52
CDRT1-207ENST00000583965 FAM187AA6NFU0 413 aa11.82□□□□□ -0.52
CDRT1-207ENST00000583965 WASH3PC4AMC7 463 aa11.82□□□□□ -0.52
CDRT1-207ENST00000583965 ZBTB24O43167 697 aaPredicted RBP11.82□□□□□ -0.52
CDRT1-207ENST00000583965 SYNCRIPO60506 623 aaKnown RBP11.82□□□□□ -0.52
CDRT1-207ENST00000583965 POP4O95707 220 aaKnown RBP11.82□□□□□ -0.52
CDRT1-207ENST00000583965 EPHX1P07099 455 aa11.82□□□□□ -0.52
CDRT1-207ENST00000583965 CR2P20023 1033 aa11.82□□□□□ -0.52
CDRT1-207ENST00000583965 PRKCHP24723 683 aa11.82□□□□□ -0.52
CDRT1-207ENST00000583965 AP1S1P61966 158 aa11.82□□□□□ -0.52
CDRT1-207ENST00000583965 ITKQ08881 620 aa11.82□□□□□ -0.52
CDRT1-207ENST00000583965 FZD5Q13467 585 aa11.82□□□□□ -0.52
CDRT1-207ENST00000583965 CAMK2GQ13555 558 aaPredicted RBP11.82□□□□□ -0.52
CDRT1-207ENST00000583965 STARD3Q14849 445 aa11.82□□□□□ -0.52
CDRT1-207ENST00000583965 C9orf64Q5T6V5 341 aa11.82□□□□□ -0.52
CDRT1-207ENST00000583965 DSG4Q86SJ6 1040 aa11.82□□□□□ -0.52
CDRT1-207ENST00000583965 SRLQ86TD4 932 aa11.82□□□□□ -0.52
CDRT1-207ENST00000583965 MMGT1Q8N4V1 131 aa11.82□□□□□ -0.52
CDRT1-207ENST00000583965 TXNDC5Q8NBS9 432 aaKnown RBP11.82□□□□□ -0.52
CDRT1-207ENST00000583965 OR2A12Q8NGT7 310 aa11.82□□□□□ -0.52
CDRT1-207ENST00000583965 CCDC110Q8TBZ0 833 aa11.82□□□□□ -0.52
CDRT1-207ENST00000583965 OR8D1Q8WZ84 308 aa11.82□□□□□ -0.52
CDRT1-207ENST00000583965 UBXN4Q92575 508 aa11.82□□□□□ -0.52
CDRT1-207ENST00000583965 TUBGCP5Q96RT8 1024 aa11.82□□□□□ -0.52
CDRT1-207ENST00000583965 ACOX2Q99424 681 aa11.82□□□□□ -0.52
CDRT1-207ENST00000583965 CEP41Q9BYV8 373 aa11.82□□□□□ -0.52
CDRT1-207ENST00000583965 CPEB1Q9BZB8 566 aaKnown RBP11.82□□□□□ -0.52
CDRT1-207ENST00000583965 TM6SF2Q9BZW4 377 aa11.82□□□□□ -0.52
CDRT1-207ENST00000583965 SLC25A51Q9H1U9 297 aa11.82□□□□□ -0.52
CDRT1-207ENST00000583965 GBA3Q9H227 469 aa11.82□□□□□ -0.52
CDRT1-207ENST00000583965 TNKS2Q9H2K2 1166 aa11.82□□□□□ -0.52
CDRT1-207ENST00000583965 CHRDQ9H2X0 955 aa11.82□□□□□ -0.52
CDRT1-207ENST00000583965 SCUBE2Q9NQ36 999 aa11.82□□□□□ -0.52
CDRT1-207ENST00000583965 RSPH14Q9UHP6 348 aa11.82□□□□□ -0.52
CDRT1-207ENST00000583965 TTLL3Q9Y4R7 772 aa11.82□□□□□ -0.52
CDRT1-207ENST00000583965 CEP192Q8TEP8 1941 aa11.82□□□□□ -0.52
CDRT1-207ENST00000583965 ZDBF2Q9HCK1 2354 aa11.82□□□□□ -0.52
CDRT1-207ENST00000583965 EML5Q05BV3 1969 aa11.81□□□□□ -0.52
CDRT1-207ENST00000583965 LRRK1Q38SD2 2015 aa11.81□□□□□ -0.52
CDRT1-207ENST00000583965 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.81□□□□□ -0.52
CDRT1-207ENST00000583965 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.81□□□□□ -0.52
CDRT1-207ENST00000583965 GOLGA6CA6NDK9 693 aa11.81□□□□□ -0.52
CDRT1-207ENST00000583965 GOLGA6BA6NDN3 693 aa11.81□□□□□ -0.52
CDRT1-207ENST00000583965 TMEM221A6NGB7 291 aa11.81□□□□□ -0.52
CDRT1-207ENST00000583965 M0R296 226 aa11.81□□□□□ -0.52
CDRT1-207ENST00000583965 MUSKO15146 869 aa11.81□□□□□ -0.52
CDRT1-207ENST00000583965 INSIG1O15503 277 aa11.81□□□□□ -0.52
CDRT1-207ENST00000583965 ADAM23O75077 832 aa11.81□□□□□ -0.52
CDRT1-207ENST00000583965 ANXA9O76027 345 aa11.81□□□□□ -0.52
CDRT1-207ENST00000583965 KRT14P02533 472 aa11.81□□□□□ -0.52
CDRT1-207ENST00000583965 SERPINF2P08697 491 aa11.81□□□□□ -0.52
CDRT1-207ENST00000583965 GOLGA6DP0CG33 693 aa11.81□□□□□ -0.52
CDRT1-207ENST00000583965 HLA-EP13747 358 aa11.81□□□□□ -0.52
CDRT1-207ENST00000583965 HOXB2P14652 356 aa11.81□□□□□ -0.52
CDRT1-207ENST00000583965 NFKB1P19838 968 aa11.81□□□□□ -0.52
CDRT1-207ENST00000583965 CD68P34810 354 aaPredicted RBP11.81□□□□□ -0.52
CDRT1-207ENST00000583965 FDFT1P37268 417 aa11.81□□□□□ -0.52
CDRT1-207ENST00000583965 PTGIRP43119 386 aa11.81□□□□□ -0.52
CDRT1-207ENST00000583965 SCNN1BP51168 640 aa11.81□□□□□ -0.52
CDRT1-207ENST00000583965 CCNHP51946 323 aaPredicted RBP11.81□□□□□ -0.52
CDRT1-207ENST00000583965 MAXP61244 160 aa11.81□□□□□ -0.52
CDRT1-207ENST00000583965 PTK6Q13882 451 aa11.81□□□□□ -0.52
CDRT1-207ENST00000583965 PRPSAP1Q14558 356 aa11.81□□□□□ -0.52
CDRT1-207ENST00000583965 ELAVL3Q14576 367 aaKnown RBP11.81□□□□□ -0.52
CDRT1-207ENST00000583965 PPP1R7Q15435 360 aa11.81□□□□□ -0.52
CDRT1-207ENST00000583965 PARP6Q2NL67 630 aa11.81□□□□□ -0.52
CDRT1-207ENST00000583965 MYLK3Q32MK0 819 aa11.81□□□□□ -0.52
CDRT1-207ENST00000583965 GLE1Q53GS7 698 aaKnown RBP11.81□□□□□ -0.52
CDRT1-207ENST00000583965 ATXN7L2Q5T6C5 722 aaPredicted RBP11.81□□□□□ -0.52
CDRT1-207ENST00000583965 DPY19L3Q6ZPD9 716 aa11.81□□□□□ -0.52
CDRT1-207ENST00000583965 SYT13Q7L8C5 426 aa11.81□□□□□ -0.52
CDRT1-207ENST00000583965 GPR161Q8N6U8 529 aaKnown RBP11.81□□□□□ -0.52
CDRT1-207ENST00000583965 FLCNQ8NFG4 579 aa11.81□□□□□ -0.52
CDRT1-207ENST00000583965 IMP4Q96G21 291 aaKnown RBP11.81□□□□□ -0.52
CDRT1-207ENST00000583965 LRIG1Q96JA1 1093 aa11.81□□□□□ -0.52
CDRT1-207ENST00000583965 FCRL5Q96RD9 977 aa11.81□□□□□ -0.52
CDRT1-207ENST00000583965 SEMA3CQ99985 751 aa11.81□□□□□ -0.52
CDRT1-207ENST00000583965 HEPHQ9BQS7 1158 aa11.81□□□□□ -0.52
CDRT1-207ENST00000583965 PRSS16Q9NQE7 514 aa11.81□□□□□ -0.52
CDRT1-207ENST00000583965 VPS45Q9NRW7 570 aa11.81□□□□□ -0.52
CDRT1-207ENST00000583965 GOLGA6AQ9NYA3 693 aa11.81□□□□□ -0.52
CDRT1-207ENST00000583965 NEU2Q9Y3R4 380 aa11.81□□□□□ -0.52
CDRT1-207ENST00000583965 MYLKQ15746 1914 aa11.8□□□□□ -0.52
CDRT1-207ENST00000583965 ANTXRLA6NF34 631 aa11.8□□□□□ -0.52
CDRT1-207ENST00000583965 PSMD3O43242 534 aa11.8□□□□□ -0.52
CDRT1-207ENST00000583965 BNIP3LO60238 219 aa11.8□□□□□ -0.52
CDRT1-207ENST00000583965 SIN3BO75182 1162 aa11.8□□□□□ -0.52
CDRT1-207ENST00000583965 PRNPP04156 253 aa11.8□□□□□ -0.52
CDRT1-207ENST00000583965 TUBBP07437 444 aa11.8□□□□□ -0.52
CDRT1-207ENST00000583965 C7P10643 843 aa11.8□□□□□ -0.52
CDRT1-207ENST00000583965 ETS1P14921 441 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms