RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 CEP97Q8IW35 865 aa23.95■■□□□ 1.43
NPLOC4-217ENST00000574897 SPATA6LQ8N4H0 392 aa23.95■■□□□ 1.43
NPLOC4-217ENST00000574897 MAGEC3Q8TD91 643 aa23.95■■□□□ 1.43
NPLOC4-217ENST00000574897 KCTD4Q8WVF5 259 aa23.95■■□□□ 1.43
NPLOC4-217ENST00000574897 C1QTNF1Q9BXJ1 281 aa23.95■■□□□ 1.43
NPLOC4-217ENST00000574897 TLE6Q9H808 572 aa23.95■■□□□ 1.43
NPLOC4-217ENST00000574897 NMRAL1Q9HBL8 299 aa23.95■■□□□ 1.43
NPLOC4-217ENST00000574897 TANC1Q9C0D5 1861 aa23.95■■□□□ 1.42
NPLOC4-217ENST00000574897 SLC35E2BP0CK96 405 aa23.95■■□□□ 1.42
NPLOC4-217ENST00000574897 RENBPP51606 427 aa23.95■■□□□ 1.42
NPLOC4-217ENST00000574897 RCN2Q14257 317 aa23.95■■□□□ 1.42
NPLOC4-217ENST00000574897 KRT72Q14CN4 511 aa23.95■■□□□ 1.42
NPLOC4-217ENST00000574897 LRRC49Q8IUZ0 686 aa23.95■■□□□ 1.42
NPLOC4-217ENST00000574897 WDR75Q8IWA0 830 aaKnown RBP23.95■■□□□ 1.42
NPLOC4-217ENST00000574897 OR6Y1Q8NGX8 325 aa23.95■■□□□ 1.42
NPLOC4-217ENST00000574897 BTBD10Q9BSF8 475 aa23.95■■□□□ 1.42
NPLOC4-217ENST00000574897 TTPALQ9BTX7 342 aa23.95■■□□□ 1.42
NPLOC4-217ENST00000574897 TAS2R1Q9NYW7 299 aa23.95■■□□□ 1.42
NPLOC4-217ENST00000574897 EPB41L3Q9Y2J2 1087 aaPredicted RBP23.95■■□□□ 1.42
NPLOC4-217ENST00000574897 SLC38A8A6NNN8 435 aa23.94■■□□□ 1.42
NPLOC4-217ENST00000574897 CCDC22O60826 627 aa23.94■■□□□ 1.42
NPLOC4-217ENST00000574897 SBK3P0C264 359 aa23.94■■□□□ 1.42
NPLOC4-217ENST00000574897 CALB2P22676 271 aa23.94■■□□□ 1.42
NPLOC4-217ENST00000574897 ZNF470Q6ECI4 717 aa23.94■■□□□ 1.42
NPLOC4-217ENST00000574897 DEFB128Q7Z7B8 93 aa23.94■■□□□ 1.42
NPLOC4-217ENST00000574897 SPATA17Q96L03 361 aa23.94■■□□□ 1.42
NPLOC4-217ENST00000574897 TASP1Q9H6P5 420 aa23.94■■□□□ 1.42
NPLOC4-217ENST00000574897 OLA1Q9NTK5 396 aaKnown RBP23.94■■□□□ 1.42
NPLOC4-217ENST00000574897 ACTL7AQ9Y615 435 aa23.94■■□□□ 1.42
NPLOC4-217ENST00000574897 CCL22O00626 93 aa23.94■■□□□ 1.42
NPLOC4-217ENST00000574897 ZNF789Q5FWF6 425 aa23.94■■□□□ 1.42
NPLOC4-217ENST00000574897 CNTN4Q8IWV2 1026 aa23.94■■□□□ 1.42
NPLOC4-217ENST00000574897 REM2Q8IYK8 340 aaPredicted RBP23.94■■□□□ 1.42
NPLOC4-217ENST00000574897 AGR3Q8TD06 166 aa23.94■■□□□ 1.42
NPLOC4-217ENST00000574897 PPP1R12CQ9BZL4 782 aa23.94■■□□□ 1.42
NPLOC4-217ENST00000574897 PRR5-ARHGAP8B1AHC4 643 aa23.93■■□□□ 1.42
NPLOC4-217ENST00000574897 CCR10P46092 362 aa23.93■■□□□ 1.42
NPLOC4-217ENST00000574897 ARHGAP8P85298 464 aa23.93■■□□□ 1.42
NPLOC4-217ENST00000574897 USP4Q13107 963 aa23.93■■□□□ 1.42
NPLOC4-217ENST00000574897 POLD3Q15054 466 aaPredicted RBP23.93■■□□□ 1.42
NPLOC4-217ENST00000574897 CENPLQ8N0S6 344 aaPredicted RBP23.93■■□□□ 1.42
NPLOC4-217ENST00000574897 TMEM151AQ8N4L1 468 aa23.93■■□□□ 1.42
NPLOC4-217ENST00000574897 FBXO22Q8NEZ5 403 aa23.93■■□□□ 1.42
NPLOC4-217ENST00000574897 DENND2DQ9H6A0 471 aaPredicted RBP23.93■■□□□ 1.42
NPLOC4-217ENST00000574897 FNIP2Q9P278 1114 aa23.93■■□□□ 1.42
NPLOC4-217ENST00000574897 NKX1-2Q9UD57 310 aaPredicted RBP23.93■■□□□ 1.42
NPLOC4-217ENST00000574897 DRGXA6NNA5 263 aa23.93■■□□□ 1.42
NPLOC4-217ENST00000574897 GYG2O15488 501 aa23.93■■□□□ 1.42
NPLOC4-217ENST00000574897 GSC2O15499 205 aa23.93■■□□□ 1.42
NPLOC4-217ENST00000574897 GRK2P25098 689 aa23.93■■□□□ 1.42
NPLOC4-217ENST00000574897 OR1E1P30953 314 aa23.93■■□□□ 1.42
NPLOC4-217ENST00000574897 SLC8A1P32418 973 aa23.93■■□□□ 1.42
NPLOC4-217ENST00000574897 PSEN1P49768 467 aa23.93■■□□□ 1.42
NPLOC4-217ENST00000574897 CDK18Q07002 472 aa23.93■■□□□ 1.42
NPLOC4-217ENST00000574897 ACCSLQ4AC99 568 aa23.93■■□□□ 1.42
NPLOC4-217ENST00000574897 ZNF781Q8N8C0 355 aa23.93■■□□□ 1.42
NPLOC4-217ENST00000574897 TTC8Q8TAM2 541 aa23.93■■□□□ 1.42
NPLOC4-217ENST00000574897 CCDC106Q9BWC9 280 aa23.93■■□□□ 1.42
NPLOC4-217ENST00000574897 VN1R3Q9BXE9 311 aa23.93■■□□□ 1.42
NPLOC4-217ENST00000574897 TLK1Q9UKI8 766 aa23.93■■□□□ 1.42
NPLOC4-217ENST00000574897 FAM95CA0A1B0GW59 222 aa23.92■■□□□ 1.42
NPLOC4-217ENST00000574897 RAMP2O60895 175 aa23.92■■□□□ 1.42
NPLOC4-217ENST00000574897 ZDHHC11BP0C7U3 371 aa23.92■■□□□ 1.42
NPLOC4-217ENST00000574897 HARS2P49590 506 aaKnown RBP23.92■■□□□ 1.42
NPLOC4-217ENST00000574897 HTRA3P83110 453 aa23.92■■□□□ 1.42
NPLOC4-217ENST00000574897 KDSRQ06136 332 aa23.92■■□□□ 1.42
NPLOC4-217ENST00000574897 FAM91A1Q658Y4 838 aa23.92■■□□□ 1.42
NPLOC4-217ENST00000574897 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.92■■□□□ 1.425e-8■□□□□ 10.5
NPLOC4-217ENST00000574897 ANKS3Q6ZW76 656 aa23.92■■□□□ 1.42
NPLOC4-217ENST00000574897 PPP4R1Q8TF05 950 aa23.92■■□□□ 1.42
NPLOC4-217ENST00000574897 ACE2Q9BYF1 805 aaPredicted RBP23.92■■□□□ 1.42
NPLOC4-217ENST00000574897 ATP13A1Q9HD20 1204 aa23.92■■□□□ 1.42
NPLOC4-217ENST00000574897 NSMCE4AQ9NXX6 385 aa23.92■■□□□ 1.42
NPLOC4-217ENST00000574897 PITPNM1O00562 1244 aa23.92■■□□□ 1.42
NPLOC4-217ENST00000574897 ZNF195O14628 629 aa23.92■■□□□ 1.42
NPLOC4-217ENST00000574897 MUSKO15146 869 aa23.92■■□□□ 1.42
NPLOC4-217ENST00000574897 HNRNPCL1O60812 293 aaKnown RBP23.92■■□□□ 1.42
NPLOC4-217ENST00000574897 ENTPD5O75356 428 aa23.92■■□□□ 1.42
NPLOC4-217ENST00000574897 GJB5O95377 273 aa23.92■■□□□ 1.42
NPLOC4-217ENST00000574897 GNRH1P01148 92 aa23.92■■□□□ 1.42
NPLOC4-217ENST00000574897 TACR2P21452 398 aa23.92■■□□□ 1.42
NPLOC4-217ENST00000574897 SLC6A4P31645 630 aa23.92■■□□□ 1.42
NPLOC4-217ENST00000574897 DLG1Q12959 904 aa23.92■■□□□ 1.42
NPLOC4-217ENST00000574897 THOC5Q13769 683 aaKnown RBP23.92■■□□□ 1.42
NPLOC4-217ENST00000574897 CCDC117Q8IWD4 279 aaPredicted RBP23.92■■□□□ 1.42
NPLOC4-217ENST00000574897 LGI2Q8N0V4 545 aa23.92■■□□□ 1.42
NPLOC4-217ENST00000574897 OR52K2Q8NGK3 314 aa23.92■■□□□ 1.42
NPLOC4-217ENST00000574897 ARRDC2Q8TBH0 407 aa23.92■■□□□ 1.42
NPLOC4-217ENST00000574897 UXTQ9UBK9 157 aaPredicted RBP23.92■■□□□ 1.42
NPLOC4-217ENST00000574897 RUVBL2Q9Y230 463 aaKnown RBP23.92■■□□□ 1.42
NPLOC4-217ENST00000574897 OR1D2P34982 312 aa23.91■■□□□ 1.42
NPLOC4-217ENST00000574897 MSLNQ13421 630 aaPredicted RBP23.91■■□□□ 1.42
NPLOC4-217ENST00000574897 SERINC3Q13530 473 aa23.91■■□□□ 1.42
NPLOC4-217ENST00000574897 CNSTQ6PJW8 725 aa23.91■■□□□ 1.42
NPLOC4-217ENST00000574897 GPATCH11Q8N954 259 aa23.91■■□□□ 1.42
NPLOC4-217ENST00000574897 DEFB118Q96PH6 123 aa23.91■■□□□ 1.42
NPLOC4-217ENST00000574897 GATA5Q9BWX5 397 aaPredicted RBP23.91■■□□□ 1.42
NPLOC4-217ENST00000574897 MRM3Q9HC36 420 aaKnown RBP23.91■■□□□ 1.42
NPLOC4-217ENST00000574897 PCDH10Q9P2E7 1040 aa23.91■■□□□ 1.42
NPLOC4-217ENST00000574897 TRIM17Q9Y577 477 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms