RNA–Protein interactions for RNA: ENST00000569647.1

CNEP1R1-211, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-211ENST00000569647 DLG2Q15700 870 aa13.09□□□□□ -0.31
CNEP1R1-211ENST00000569647 INO80DQ53TQ3 878 aaPredicted RBP13.09□□□□□ -0.31
CNEP1R1-211ENST00000569647 C22orf39Q6P5X5 142 aa13.09□□□□□ -0.31
CNEP1R1-211ENST00000569647 LEKR1Q6ZMV7 388 aa13.09□□□□□ -0.31
CNEP1R1-211ENST00000569647 NYAP1Q6ZVC0 841 aa13.09□□□□□ -0.31
CNEP1R1-211ENST00000569647 LPCAT2Q7L5N7 544 aa13.09□□□□□ -0.31
CNEP1R1-211ENST00000569647 SLC13A5Q86YT5 568 aaPredicted RBP13.09□□□□□ -0.31
CNEP1R1-211ENST00000569647 ATP11CQ8NB49 1132 aa13.09□□□□□ -0.31
CNEP1R1-211ENST00000569647 CASKIN2Q8WXE0 1202 aa13.09□□□□□ -0.31
CNEP1R1-211ENST00000569647 MAML1Q92585 1016 aa13.09□□□□□ -0.31
CNEP1R1-211ENST00000569647 P3H4Q92791 437 aa13.09□□□□□ -0.31
CNEP1R1-211ENST00000569647 FATE1Q969F0 183 aa13.09□□□□□ -0.31
CNEP1R1-211ENST00000569647 ISG20Q96AZ6 181 aaKnown RBP13.09□□□□□ -0.31
CNEP1R1-211ENST00000569647 HAUS1Q96CS2 278 aa13.09□□□□□ -0.31
CNEP1R1-211ENST00000569647 ZNF599Q96NL3 588 aa13.09□□□□□ -0.31
CNEP1R1-211ENST00000569647 CEP44Q9C0F1 390 aa13.09□□□□□ -0.31
CNEP1R1-211ENST00000569647 MTG2Q9H4K7 406 aa13.09□□□□□ -0.31
CNEP1R1-211ENST00000569647 UBA2Q9UBT2 640 aaPredicted RBP13.09□□□□□ -0.31
CNEP1R1-211ENST00000569647 SNX12Q9UMY4 172 aa13.09□□□□□ -0.31
CNEP1R1-211ENST00000569647 FCF1Q9Y324 198 aaKnown RBP13.09□□□□□ -0.31
CNEP1R1-211ENST00000569647 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.08□□□□□ -0.32
CNEP1R1-211ENST00000569647 EDDM13A0A1B0GTR0 161 aa13.08□□□□□ -0.32
CNEP1R1-211ENST00000569647 TARSL2A2RTX5 802 aaKnown RBP13.08□□□□□ -0.32
CNEP1R1-211ENST00000569647 ZBTB24O43167 697 aaPredicted RBP13.08□□□□□ -0.32
CNEP1R1-211ENST00000569647 MAP3K13O43283 966 aa13.08□□□□□ -0.32
CNEP1R1-211ENST00000569647 ZNF821O75541 412 aaPredicted RBP13.08□□□□□ -0.32
CNEP1R1-211ENST00000569647 TMCC1O94876 653 aa13.08□□□□□ -0.32
CNEP1R1-211ENST00000569647 EPHX1P07099 455 aa13.08□□□□□ -0.32
CNEP1R1-211ENST00000569647 C7P10643 843 aa13.08□□□□□ -0.32
CNEP1R1-211ENST00000569647 CCNCP24863 283 aa13.08□□□□□ -0.32
CNEP1R1-211ENST00000569647 DHPSP49366 369 aaPredicted RBP13.08□□□□□ -0.32
CNEP1R1-211ENST00000569647 LIMK1P53667 647 aa13.08□□□□□ -0.32
CNEP1R1-211ENST00000569647 ETF1P62495 437 aaKnown RBP13.08□□□□□ -0.32
CNEP1R1-211ENST00000569647 OTUD4Q01804 1114 aaKnown RBP13.08□□□□□ -0.32
CNEP1R1-211ENST00000569647 ZNF33AQ06730 810 aa13.08□□□□□ -0.32
CNEP1R1-211ENST00000569647 RFTN1Q14699 578 aaPredicted RBP13.08□□□□□ -0.32
CNEP1R1-211ENST00000569647 PDK1Q15118 436 aa13.08□□□□□ -0.32
CNEP1R1-211ENST00000569647 PRKD1Q15139 912 aaPredicted RBP13.08□□□□□ -0.32
CNEP1R1-211ENST00000569647 CYTH1Q15438 398 aa13.08□□□□□ -0.32
CNEP1R1-211ENST00000569647 C9orf64Q5T6V5 341 aa13.08□□□□□ -0.32
CNEP1R1-211ENST00000569647 TMCO4Q5TGY1 634 aa13.08□□□□□ -0.32
CNEP1R1-211ENST00000569647 PAPD7Q5XG87 772 aaKnown RBP13.08□□□□□ -0.32
CNEP1R1-211ENST00000569647 BZW1Q7L1Q6 419 aaKnown RBP13.08□□□□□ -0.32
CNEP1R1-211ENST00000569647 CYP2U1Q7Z449 544 aa13.08□□□□□ -0.32
CNEP1R1-211ENST00000569647 METTL3Q86U44 580 aaKnown RBP13.08□□□□□ -0.32
CNEP1R1-211ENST00000569647 TMEFF1Q8IYR6 380 aa13.08□□□□□ -0.32
CNEP1R1-211ENST00000569647 PCDH20Q8N6Y1 951 aaKnown RBP13.08□□□□□ -0.32
CNEP1R1-211ENST00000569647 ACTL9Q8TC94 416 aa13.08□□□□□ -0.32
CNEP1R1-211ENST00000569647 LRRN4Q8WUT4 740 aa13.08□□□□□ -0.32
CNEP1R1-211ENST00000569647 PTPRN2Q92932 1015 aa13.08□□□□□ -0.32
CNEP1R1-211ENST00000569647 ZNF419Q96HQ0 510 aaPredicted RBP13.08□□□□□ -0.32
CNEP1R1-211ENST00000569647 PBKQ96KB5 322 aa13.08□□□□□ -0.32
CNEP1R1-211ENST00000569647 MRGPRX1Q96LB2 322 aa13.08□□□□□ -0.32
CNEP1R1-211ENST00000569647 OSBPL9Q96SU4 736 aa13.08□□□□□ -0.32
CNEP1R1-211ENST00000569647 LGMNQ99538 433 aa13.08□□□□□ -0.32
CNEP1R1-211ENST00000569647 NAPGQ99747 312 aaPredicted RBP13.08□□□□□ -0.32
CNEP1R1-211ENST00000569647 BRD8Q9H0E9 1235 aa13.08□□□□□ -0.32
CNEP1R1-211ENST00000569647 SLC6A17Q9H1V8 727 aa13.08□□□□□ -0.32
CNEP1R1-211ENST00000569647 PRSS16Q9NQE7 514 aa13.08□□□□□ -0.32
CNEP1R1-211ENST00000569647 LHX3Q9UBR4 397 aa13.08□□□□□ -0.32
CNEP1R1-211ENST00000569647 SUN2Q9UH99 717 aa13.08□□□□□ -0.32
CNEP1R1-211ENST00000569647 CES2O00748 559 aa13.07□□□□□ -0.32
CNEP1R1-211ENST00000569647 PPP1R12AO14974 1030 aaPredicted RBP13.07□□□□□ -0.32
CNEP1R1-211ENST00000569647 MATN3O15232 486 aa13.07□□□□□ -0.32
CNEP1R1-211ENST00000569647 CEP104O60308 925 aa13.07□□□□□ -0.32
CNEP1R1-211ENST00000569647 SIN3BO75182 1162 aa13.07□□□□□ -0.32
CNEP1R1-211ENST00000569647 PTGER3P43115 390 aa13.07□□□□□ -0.32
CNEP1R1-211ENST00000569647 SLC10A7Q0GE19 358 aa13.07□□□□□ -0.32
CNEP1R1-211ENST00000569647 XRCC4Q13426 336 aa13.07□□□□□ -0.32
CNEP1R1-211ENST00000569647 LBRQ14739 615 aaKnown RBP13.07□□□□□ -0.32
CNEP1R1-211ENST00000569647 STARD3Q14849 445 aa13.07□□□□□ -0.32
CNEP1R1-211ENST00000569647 SIX1Q15475 284 aaPredicted RBP13.07□□□□□ -0.32
CNEP1R1-211ENST00000569647 SPDYCQ5MJ68 293 aa13.07□□□□□ -0.32
CNEP1R1-211ENST00000569647 CCDC181Q5TID7 509 aa13.07□□□□□ -0.32
CNEP1R1-211ENST00000569647 TIGD7Q6NT04 549 aaPredicted RBP13.07□□□□□ -0.32
CNEP1R1-211ENST00000569647 Q6ZVU0 165 aa13.07□□□□□ -0.32
CNEP1R1-211ENST00000569647 ARMCX6Q7L4S7 300 aa13.07□□□□□ -0.32
CNEP1R1-211ENST00000569647 PLPP6Q8IY26 295 aa13.07□□□□□ -0.32
CNEP1R1-211ENST00000569647 CCDC13Q8IYE1 715 aa13.07□□□□□ -0.32
CNEP1R1-211ENST00000569647 RASGEF1CQ8N431 466 aa13.07□□□□□ -0.32
CNEP1R1-211ENST00000569647 TEX26Q8N6G2 289 aa13.07□□□□□ -0.32
CNEP1R1-211ENST00000569647 TTC13Q8NBP0 860 aa13.07□□□□□ -0.32
CNEP1R1-211ENST00000569647 CCNYQ8ND76 341 aa13.07□□□□□ -0.32
CNEP1R1-211ENST00000569647 COG1Q8WTW3 980 aa13.07□□□□□ -0.32
CNEP1R1-211ENST00000569647 QKIQ96PU8 341 aaKnown RBP eCLIP13.07□□□□□ -0.32
CNEP1R1-211ENST00000569647 CD93Q9NPY3 652 aa13.07□□□□□ -0.32
CNEP1R1-211ENST00000569647 CYP8B1Q9UNU6 501 aa13.07□□□□□ -0.32
CNEP1R1-211ENST00000569647 R3HDM2Q9Y2K5 976 aaKnown RBP13.07□□□□□ -0.32
CNEP1R1-211ENST00000569647 TPRP12270 2363 aaKnown RBP13.07□□□□□ -0.32
CNEP1R1-211ENST00000569647 FRYQ5TBA9 3013 aa13.07□□□□□ -0.32
CNEP1R1-211ENST00000569647 PCNX2A6NKB5 2137 aa13.06□□□□□ -0.32
CNEP1R1-211ENST00000569647 IGHV1OR15-9A0A0B4J2B8 117 aa13.06□□□□□ -0.32
CNEP1R1-211ENST00000569647 LNP1A1A4G5 178 aa13.06□□□□□ -0.32
CNEP1R1-211ENST00000569647 CTAGE9A4FU28 777 aa13.06□□□□□ -0.32
CNEP1R1-211ENST00000569647 HACD1B0YJ81 288 aa13.06□□□□□ -0.32
CNEP1R1-211ENST00000569647 PATE3B3GLJ2 98 aa13.06□□□□□ -0.32
CNEP1R1-211ENST00000569647 SYNCRIPO60506 623 aaKnown RBP13.06□□□□□ -0.32
CNEP1R1-211ENST00000569647 ZNF217O75362 1048 aa13.06□□□□□ -0.32
CNEP1R1-211ENST00000569647 GSRP00390 522 aa13.06□□□□□ -0.32
CNEP1R1-211ENST00000569647 FGGP02679 453 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms