RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 LHX3Q9UBR4 397 aa11.66□□□□□ -0.54
KARS-207ENST00000566560 SUN2Q9UH99 717 aa11.66□□□□□ -0.54
KARS-207ENST00000566560 TTLL3Q9Y4R7 772 aa11.66□□□□□ -0.54
KARS-207ENST00000566560 CACNA1IQ9P0X4 2223 aa11.66□□□□□ -0.54
KARS-207ENST00000566560 GOLGA6L10A0A0M3HER8 536 aa11.65□□□□□ -0.54
KARS-207ENST00000566560 A0A1W2PQF6 199 aa11.65□□□□□ -0.54
KARS-207ENST00000566560 TARSL2A2RTX5 802 aaKnown RBP11.65□□□□□ -0.54
KARS-207ENST00000566560 PRR33A8MZF0 331 aa11.65□□□□□ -0.54
KARS-207ENST00000566560 MTSS1O43312 755 aa11.65□□□□□ -0.54
KARS-207ENST00000566560 GSRP00390 522 aa11.65□□□□□ -0.54
KARS-207ENST00000566560 TUBB4AP04350 444 aa11.65□□□□□ -0.54
KARS-207ENST00000566560 CCNB1P14635 433 aa11.65□□□□□ -0.54
KARS-207ENST00000566560 PRLRP16471 622 aa11.65□□□□□ -0.54
KARS-207ENST00000566560 HSPA9P38646 679 aaKnown RBP11.65□□□□□ -0.54
KARS-207ENST00000566560 RENBPP51606 427 aa11.65□□□□□ -0.54
KARS-207ENST00000566560 DGKEP52429 567 aa11.65□□□□□ -0.54
KARS-207ENST00000566560 SNRPD1P62314 119 aaKnown RBP11.65□□□□□ -0.54
KARS-207ENST00000566560 SATB1Q01826 763 aa11.65□□□□□ -0.54
KARS-207ENST00000566560 CAMK2GQ13555 558 aaPredicted RBP11.65□□□□□ -0.54
KARS-207ENST00000566560 HNRNPDQ14103 355 aaKnown RBP11.65□□□□□ -0.54
KARS-207ENST00000566560 CYTH1Q15438 398 aa11.65□□□□□ -0.54
KARS-207ENST00000566560 SIX1Q15475 284 aaPredicted RBP11.65□□□□□ -0.54
KARS-207ENST00000566560 TMEM31Q5JXX7 168 aa11.65□□□□□ -0.54
KARS-207ENST00000566560 ATXN7L2Q5T6C5 722 aaPredicted RBP11.65□□□□□ -0.54
KARS-207ENST00000566560 MARC1Q5VT66 337 aa11.65□□□□□ -0.54
KARS-207ENST00000566560 KIAA1211LQ6NV74 962 aa11.65□□□□□ -0.54
KARS-207ENST00000566560 DARS2Q6PI48 645 aaKnown RBP11.65□□□□□ -0.54
KARS-207ENST00000566560 RYBPQ8N488 228 aaPredicted RBP11.65□□□□□ -0.54
KARS-207ENST00000566560 OR2AP1Q8NGE2 309 aa11.65□□□□□ -0.54
KARS-207ENST00000566560 OR6K2Q8NGY2 324 aa11.65□□□□□ -0.54
KARS-207ENST00000566560 SLC35B2Q8TB61 432 aa11.65□□□□□ -0.54
KARS-207ENST00000566560 ACTRT1Q8TDG2 376 aa11.65□□□□□ -0.54
KARS-207ENST00000566560 C1orf54Q8WWF1 131 aa11.65□□□□□ -0.54
KARS-207ENST00000566560 HTR3CQ8WXA8 447 aa11.65□□□□□ -0.54
KARS-207ENST00000566560 OR8D1Q8WZ84 308 aa11.65□□□□□ -0.54
KARS-207ENST00000566560 PTPRN2Q92932 1015 aa11.65□□□□□ -0.54
KARS-207ENST00000566560 ISG20Q96AZ6 181 aaKnown RBP11.65□□□□□ -0.54
KARS-207ENST00000566560 SPSB2Q99619 263 aa11.65□□□□□ -0.54
KARS-207ENST00000566560 FERMT1Q9BQL6 677 aa11.65□□□□□ -0.54
KARS-207ENST00000566560 C1QTNF1Q9BXJ1 281 aa11.65□□□□□ -0.54
KARS-207ENST00000566560 CEP41Q9BYV8 373 aa11.65□□□□□ -0.54
KARS-207ENST00000566560 FBRSQ9HAH7 460 aa11.65□□□□□ -0.54
KARS-207ENST00000566560 POLMQ9NP87 494 aaPredicted RBP11.65□□□□□ -0.54
KARS-207ENST00000566560 NT5MQ9NPB1 228 aa11.65□□□□□ -0.54
KARS-207ENST00000566560 PRSS16Q9NQE7 514 aa11.65□□□□□ -0.54
KARS-207ENST00000566560 TTC7AQ9ULT0 858 aaPredicted RBP11.65□□□□□ -0.54
KARS-207ENST00000566560 A0A0C4DFX4 3053 aa11.65□□□□□ -0.54
KARS-207ENST00000566560 RNF103O00237 685 aa11.64□□□□□ -0.55
KARS-207ENST00000566560 MUSKO15146 869 aa11.64□□□□□ -0.55
KARS-207ENST00000566560 ALOX15BO15296 676 aa11.64□□□□□ -0.55
KARS-207ENST00000566560 KCNN4O15554 427 aa11.64□□□□□ -0.55
KARS-207ENST00000566560 LIASO43766 372 aa11.64□□□□□ -0.55
KARS-207ENST00000566560 GPR37L1O60883 481 aa11.64□□□□□ -0.55
KARS-207ENST00000566560 ZNF821O75541 412 aaPredicted RBP11.64□□□□□ -0.55
KARS-207ENST00000566560 ZNF189O75820 626 aaPredicted RBP11.64□□□□□ -0.55
KARS-207ENST00000566560 HLA-DQB2P05538 268 aa11.64□□□□□ -0.55
KARS-207ENST00000566560 PTPN3P26045 913 aa11.64□□□□□ -0.55
KARS-207ENST00000566560 RBL1P28749 1068 aa11.64□□□□□ -0.55
KARS-207ENST00000566560 CXCL12P48061 93 aa11.64□□□□□ -0.55
KARS-207ENST00000566560 CCNHP51946 323 aaPredicted RBP11.64□□□□□ -0.55
KARS-207ENST00000566560 MAXP61244 160 aa11.64□□□□□ -0.55
KARS-207ENST00000566560 KCNC4Q03721 635 aa11.64□□□□□ -0.55
KARS-207ENST00000566560 CARD16Q5EG05 197 aa11.64□□□□□ -0.55
KARS-207ENST00000566560 C9orf64Q5T6V5 341 aa11.64□□□□□ -0.55
KARS-207ENST00000566560 ANO7Q6IWH7 933 aa11.64□□□□□ -0.55
KARS-207ENST00000566560 DPY19L3Q6ZPD9 716 aa11.64□□□□□ -0.55
KARS-207ENST00000566560 DSG4Q86SJ6 1040 aa11.64□□□□□ -0.55
KARS-207ENST00000566560 STK40Q8N2I9 435 aa11.64□□□□□ -0.55
KARS-207ENST00000566560 TEX26Q8N6G2 289 aa11.64□□□□□ -0.55
KARS-207ENST00000566560 DTWD2Q8NBA8 298 aa11.64□□□□□ -0.55
KARS-207ENST00000566560 TSEN2Q8NCE0 465 aaKnown RBP11.64□□□□□ -0.55
KARS-207ENST00000566560 OR2A12Q8NGT7 310 aa11.64□□□□□ -0.55
KARS-207ENST00000566560 OR2T3Q8NH03 318 aa11.64□□□□□ -0.55
KARS-207ENST00000566560 GRIN3AQ8TCU5 1115 aa11.64□□□□□ -0.55
KARS-207ENST00000566560 HMGB4Q8WW32 186 aa11.64□□□□□ -0.55
KARS-207ENST00000566560 NKD2Q969F2 451 aaPredicted RBP11.64□□□□□ -0.55
KARS-207ENST00000566560 PSKH2Q96QS6 385 aa11.64□□□□□ -0.55
KARS-207ENST00000566560 MGME1Q9BQP7 344 aa11.64□□□□□ -0.55
KARS-207ENST00000566560 AP1M1Q9BXS5 423 aa11.64□□□□□ -0.55
KARS-207ENST00000566560 ZDHHC6Q9H6R6 413 aa11.64□□□□□ -0.55
KARS-207ENST00000566560 C10orf88Q9H8K7 445 aa11.64□□□□□ -0.55
KARS-207ENST00000566560 CD248Q9HCU0 757 aa11.64□□□□□ -0.55
KARS-207ENST00000566560 PRMT8Q9NR22 394 aaPredicted RBP11.64□□□□□ -0.55
KARS-207ENST00000566560 RBM22Q9NW64 420 aaKnown RBP eCLIP11.64□□□□□ -0.556e-8■■□□□ 13.5
KARS-207ENST00000566560 BCCIPQ9P287 314 aaKnown RBP eCLIP11.64□□□□□ -0.55
KARS-207ENST00000566560 KLHL8Q9P2G9 620 aaPredicted RBP11.64□□□□□ -0.55
KARS-207ENST00000566560 DNPEPQ9ULA0 475 aa11.64□□□□□ -0.55
KARS-207ENST00000566560 BCLAF3A2AJT9 711 aaKnown RBP11.63□□□□□ -0.55
KARS-207ENST00000566560 CFAP69A5D8W1 941 aa11.63□□□□□ -0.55
KARS-207ENST00000566560 KRIT1O00522 736 aa11.63□□□□□ -0.55
KARS-207ENST00000566560 ZBTB24O43167 697 aaPredicted RBP11.63□□□□□ -0.55
KARS-207ENST00000566560 LAMTOR5O43504 91 aa11.63□□□□□ -0.55
KARS-207ENST00000566560 RNASEH1O60930 286 aaKnown RBP11.63□□□□□ -0.55
KARS-207ENST00000566560 ALDH1A2O94788 518 aa11.63□□□□□ -0.55
KARS-207ENST00000566560 STK10O94804 968 aaKnown RBP11.63□□□□□ -0.55
KARS-207ENST00000566560 PAPSS2O95340 614 aaPredicted RBP11.63□□□□□ -0.55
KARS-207ENST00000566560 APBB3O95704 486 aa11.63□□□□□ -0.55
KARS-207ENST00000566560 JCHAINP01591 159 aa11.63□□□□□ -0.55
KARS-207ENST00000566560 AVPR2P30518 371 aa11.63□□□□□ -0.55
KARS-207ENST00000566560 MAPK8P45983 427 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms