RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 GLDCP23378 1020 aa17.01■□□□□ 0.31
USB1-211ENST00000565662 NFKBIAP25963 317 aa17.01■□□□□ 0.31
USB1-211ENST00000565662 EPHA8P29322 1005 aaPredicted RBP17.01■□□□□ 0.31
USB1-211ENST00000565662 PBX1P40424 430 aa17.01■□□□□ 0.31
USB1-211ENST00000565662 RHOAP61586 193 aa17.01■□□□□ 0.31
USB1-211ENST00000565662 SERINC3Q13530 473 aa17.01■□□□□ 0.31
USB1-211ENST00000565662 TSR1Q2NL82 804 aaKnown RBP17.01■□□□□ 0.31
USB1-211ENST00000565662 BOLA3Q53S33 107 aa17.01■□□□□ 0.31
USB1-211ENST00000565662 FAM72AQ5TYM5 149 aa17.01■□□□□ 0.31
USB1-211ENST00000565662 FAM72DQ6L9T8 149 aa17.01■□□□□ 0.31
USB1-211ENST00000565662 UNQ6494/PRO21346Q6UXR6 183 aa17.01■□□□□ 0.31
USB1-211ENST00000565662 RAB44Q7Z6P3 723 aaPredicted RBP17.01■□□□□ 0.31
USB1-211ENST00000565662 FAM72BQ86X60 149 aa17.01■□□□□ 0.31
USB1-211ENST00000565662 DNAAF5Q86Y56 855 aa17.01■□□□□ 0.31
USB1-211ENST00000565662 RYBPQ8N488 228 aaPredicted RBP17.01■□□□□ 0.31
USB1-211ENST00000565662 TMEM145Q8NBT3 493 aa17.01■□□□□ 0.31
USB1-211ENST00000565662 KLHDC7BQ96G42 594 aa17.01■□□□□ 0.31
USB1-211ENST00000565662 SCNM1Q9BWG6 230 aa17.01■□□□□ 0.31
USB1-211ENST00000565662 CPEB1Q9BZB8 566 aaKnown RBP17.01■□□□□ 0.31
USB1-211ENST00000565662 HAUS2Q9NVX0 235 aa17.01■□□□□ 0.31
USB1-211ENST00000565662 DKK3Q9UBP4 350 aa17.01■□□□□ 0.31
USB1-211ENST00000565662 UBA2Q9UBT2 640 aaPredicted RBP17.01■□□□□ 0.31
USB1-211ENST00000565662 WASF3Q9UPY6 502 aa17.01■□□□□ 0.31
USB1-211ENST00000565662 FCF1Q9Y324 198 aaKnown RBP17.01■□□□□ 0.31
USB1-211ENST00000565662 PCDHGA1Q9Y5H4 931 aa17.01■□□□□ 0.31
USB1-211ENST00000565662 HS3ST3A1Q9Y663 406 aa17.01■□□□□ 0.31
USB1-211ENST00000565662 A0A1W2PQU0 124 aa17■□□□□ 0.31
USB1-211ENST00000565662 FAM170AA1A519 330 aa17■□□□□ 0.31
USB1-211ENST00000565662 RASA4BC9J798 803 aa17■□□□□ 0.31
USB1-211ENST00000565662 DDX3XO00571 662 aaKnown RBP eCLIP17■□□□□ 0.312e-15■■■■■ 27.4
USB1-211ENST00000565662 NEMP1O14524 444 aa17■□□□□ 0.31
USB1-211ENST00000565662 RASA4O43374 803 aa17■□□□□ 0.31
USB1-211ENST00000565662 ZNF821O75541 412 aaPredicted RBP17■□□□□ 0.31
USB1-211ENST00000565662 TMCC1O94876 653 aa17■□□□□ 0.31
USB1-211ENST00000565662 PROS1P07225 676 aa17■□□□□ 0.31
USB1-211ENST00000565662 SERPINB6P35237 376 aa17■□□□□ 0.31
USB1-211ENST00000565662 ACVRL1P37023 503 aa17■□□□□ 0.31
USB1-211ENST00000565662 ARL4AP40617 200 aa17■□□□□ 0.31
USB1-211ENST00000565662 ELP6Q0PNE2 266 aa17■□□□□ 0.31
USB1-211ENST00000565662 ST3GAL2Q16842 350 aa17■□□□□ 0.31
USB1-211ENST00000565662 ZSCAN23Q3MJ62 389 aa17■□□□□ 0.31
USB1-211ENST00000565662 NIPA2Q8N8Q9 360 aa17■□□□□ 0.31
USB1-211ENST00000565662 CHST14Q8NCH0 376 aa17■□□□□ 0.31
USB1-211ENST00000565662 ARRDC3Q96B67 414 aa17■□□□□ 0.31
USB1-211ENST00000565662 LENG8Q96PV6 779 aaPredicted RBP17■□□□□ 0.31
USB1-211ENST00000565662 TUBGCP5Q96RT8 1024 aa17■□□□□ 0.31
USB1-211ENST00000565662 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17■□□□□ 0.31
USB1-211ENST00000565662 TM6SF2Q9BZW4 377 aa17■□□□□ 0.31
USB1-211ENST00000565662 DHX35Q9H5Z1 703 aaKnown RBP17■□□□□ 0.31
USB1-211ENST00000565662 IL21RQ9HBE5 538 aa17■□□□□ 0.31
USB1-211ENST00000565662 TAS2R14Q9NYV8 317 aa17■□□□□ 0.31
USB1-211ENST00000565662 IP6K2Q9UHH9 426 aa17■□□□□ 0.31
USB1-211ENST00000565662 CABIN1Q9Y6J0 2220 aa16.99■□□□□ 0.31
USB1-211ENST00000565662 A0A1W2PQ67 120 aa16.99■□□□□ 0.31
USB1-211ENST00000565662 H3BRJ5 948 aa16.99■□□□□ 0.31
USB1-211ENST00000565662 ALPPL2P10696 532 aa16.99■□□□□ 0.31
USB1-211ENST00000565662 MAT2AP31153 395 aaKnown RBP16.99■□□□□ 0.31
USB1-211ENST00000565662 RABIFP47224 123 aa16.99■□□□□ 0.31
USB1-211ENST00000565662 NUMBP49757 651 aa16.99■□□□□ 0.31
USB1-211ENST00000565662 RENBPP51606 427 aa16.99■□□□□ 0.31
USB1-211ENST00000565662 TAS2R38P59533 333 aa16.99■□□□□ 0.31
USB1-211ENST00000565662 SGCGQ13326 291 aa16.99■□□□□ 0.31
USB1-211ENST00000565662 ILKQ13418 452 aa16.99■□□□□ 0.31
USB1-211ENST00000565662 ZNF284Q2VY69 593 aa16.99■□□□□ 0.31
USB1-211ENST00000565662 MYLK3Q32MK0 819 aa16.99■□□□□ 0.31
USB1-211ENST00000565662 POM121L1PQ3SYA9 428 aa16.99■□□□□ 0.31
USB1-211ENST00000565662 TMEM259Q4ZIN3 620 aa16.99■□□□□ 0.31
USB1-211ENST00000565662 CFAP58Q5T655 872 aa16.99■□□□□ 0.31
USB1-211ENST00000565662 KYAT3Q6YP21 454 aaKnown RBP16.99■□□□□ 0.31
USB1-211ENST00000565662 RFX8Q6ZV50 586 aa16.99■□□□□ 0.31
USB1-211ENST00000565662 BBS5Q8N3I7 341 aa16.99■□□□□ 0.31
USB1-211ENST00000565662 TEKT4Q8WW24 435 aa16.99■□□□□ 0.31
USB1-211ENST00000565662 SNRNP25Q9BV90 132 aaKnown RBP16.99■□□□□ 0.31
USB1-211ENST00000565662 EBF2Q9HAK2 575 aa16.99■□□□□ 0.31
USB1-211ENST00000565662 NDFIP2Q9NV92 336 aa16.99■□□□□ 0.31
USB1-211ENST00000565662 ZNHIT6Q9NWK9 470 aaKnown RBP16.99■□□□□ 0.31
USB1-211ENST00000565662 RCOR3Q9P2K3 495 aaPredicted RBP16.99■□□□□ 0.31
USB1-211ENST00000565662 FADS3Q9Y5Q0 445 aa16.99■□□□□ 0.31
USB1-211ENST00000565662 TRPM6Q9BX84 2022 aa16.98■□□□□ 0.31
USB1-211ENST00000565662 C16orf96A6NNT2 1141 aa16.98■□□□□ 0.31
USB1-211ENST00000565662 H3BM21 787 aa16.98■□□□□ 0.31
USB1-211ENST00000565662 KRIT1O00522 736 aa16.98■□□□□ 0.31
USB1-211ENST00000565662 LRCH4O75427 683 aa16.98■□□□□ 0.31
USB1-211ENST00000565662 CD160O95971 181 aa16.98■□□□□ 0.31
USB1-211ENST00000565662 XPAP23025 273 aaPredicted RBP16.98■□□□□ 0.31
USB1-211ENST00000565662 HSPA9P38646 679 aaKnown RBP16.98■□□□□ 0.31
USB1-211ENST00000565662 CSNK1DP48730 415 aa16.98■□□□□ 0.31
USB1-211ENST00000565662 DPYSL2Q16555 572 aa16.98■□□□□ 0.31
USB1-211ENST00000565662 HADHQ16836 314 aaKnown RBP16.98■□□□□ 0.31
USB1-211ENST00000565662 BRAT1Q6PJG6 821 aa16.98■□□□□ 0.31
USB1-211ENST00000565662 GDPD4Q6W3E5 623 aa16.98■□□□□ 0.31
USB1-211ENST00000565662 PARS2Q7L3T8 475 aaKnown RBP16.98■□□□□ 0.31
USB1-211ENST00000565662 ABI3BPQ7Z7G0 1075 aa16.98■□□□□ 0.31
USB1-211ENST00000565662 LRRC49Q8IUZ0 686 aa16.98■□□□□ 0.31
USB1-211ENST00000565662 SAP25Q8TEE9 199 aa16.98■□□□□ 0.31
USB1-211ENST00000565662 HMCESQ96FZ2 354 aa16.98■□□□□ 0.31
USB1-211ENST00000565662 ZNF641Q96N77 438 aaPredicted RBP16.98■□□□□ 0.31
USB1-211ENST00000565662 ZNF599Q96NL3 588 aa16.98■□□□□ 0.31
USB1-211ENST00000565662 SLC17A9Q9BYT1 436 aa16.98■□□□□ 0.31
USB1-211ENST00000565662 LRRC19Q9H756 370 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms