RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 PDE1CQ14123 709 aaPredicted RBP19.02■□□□□ 0.64
NME3-204ENST00000563498 CDKN3Q16667 212 aa19.02■□□□□ 0.64
NME3-204ENST00000563498 TMEM35BQ8NCS4 154 aa19.02■□□□□ 0.64
NME3-204ENST00000563498 DENND6BQ8NEG7 585 aa19.02■□□□□ 0.64
NME3-204ENST00000563498 COL26A1Q96A83 441 aa19.02■□□□□ 0.64
NME3-204ENST00000563498 CCDC97Q96F63 343 aaPredicted RBP19.02■□□□□ 0.64
NME3-204ENST00000563498 SLC46A1Q96NT5 459 aa19.02■□□□□ 0.64
NME3-204ENST00000563498 TBCBQ99426 244 aa19.02■□□□□ 0.64
NME3-204ENST00000563498 ZYG11BQ9C0D3 744 aa19.02■□□□□ 0.64
NME3-204ENST00000563498 ATP13A1Q9HD20 1204 aa19.02■□□□□ 0.64
NME3-204ENST00000563498 SIX2Q9NPC8 291 aa19.02■□□□□ 0.64
NME3-204ENST00000563498 IPO11Q9UI26 975 aaKnown RBP19.02■□□□□ 0.64
NME3-204ENST00000563498 KLF15Q9UIH9 416 aa19.02■□□□□ 0.64
NME3-204ENST00000563498 DNAJC12Q9UKB3 198 aa19.02■□□□□ 0.64
NME3-204ENST00000563498 SATB2Q9UPW6 733 aa19.02■□□□□ 0.64
NME3-204ENST00000563498 DOCK4Q8N1I0 1966 aa19.01■□□□□ 0.63
NME3-204ENST00000563498 FOXN3O00409 490 aaPredicted RBP19.01■□□□□ 0.63
NME3-204ENST00000563498 JUNDP17535 347 aa19.01■□□□□ 0.63
NME3-204ENST00000563498 ARF5P84085 180 aa19.01■□□□□ 0.63
NME3-204ENST00000563498 GNA12Q03113 381 aa19.01■□□□□ 0.63
NME3-204ENST00000563498 C3orf38Q5JPI3 329 aa19.01■□□□□ 0.63
NME3-204ENST00000563498 GUSBP11Q6P575 273 aa19.01■□□□□ 0.63
NME3-204ENST00000563498 RBM44Q6ZP01 1051 aaKnown RBP19.01■□□□□ 0.63
NME3-204ENST00000563498 PARS2Q7L3T8 475 aaKnown RBP19.01■□□□□ 0.63
NME3-204ENST00000563498 EFL1Q7Z2Z2 1120 aaKnown RBP19.01■□□□□ 0.63
NME3-204ENST00000563498 BNIPLQ7Z465 357 aa19.01■□□□□ 0.63
NME3-204ENST00000563498 CREBRFQ8IUR6 639 aa19.01■□□□□ 0.63
NME3-204ENST00000563498 FAM71AQ8IYT1 594 aa19.01■□□□□ 0.63
NME3-204ENST00000563498 BTN2A2Q8WVV5 523 aa19.01■□□□□ 0.63
NME3-204ENST00000563498 ISG20Q96AZ6 181 aaKnown RBP19.01■□□□□ 0.63
NME3-204ENST00000563498 C18orf8Q96DM3 657 aa19.01■□□□□ 0.63
NME3-204ENST00000563498 PLCB1Q9NQ66 1216 aa19.01■□□□□ 0.63
NME3-204ENST00000563498 TMPRSS4Q9NRS4 437 aa19.01■□□□□ 0.63
NME3-204ENST00000563498 PPARGC1AQ9UBK2 798 aaKnown RBP19.01■□□□□ 0.63
NME3-204ENST00000563498 AJAP1Q9UKB5 411 aaPredicted RBP19.01■□□□□ 0.63
NME3-204ENST00000563498 ENTPD2Q9Y5L3 495 aa19.01■□□□□ 0.63
NME3-204ENST00000563498 A0A1W2PNU3 283 aaPredicted RBP19■□□□□ 0.63
NME3-204ENST00000563498 CPED1A4D0V7 1026 aa19■□□□□ 0.63
NME3-204ENST00000563498 SRGAP2O75044 1071 aa19■□□□□ 0.63
NME3-204ENST00000563498 MLLT3P42568 568 aaPredicted RBP19■□□□□ 0.63
NME3-204ENST00000563498 DNA2P51530 1060 aa19■□□□□ 0.63
NME3-204ENST00000563498 PFN3P60673 137 aa19■□□□□ 0.63
NME3-204ENST00000563498 NR0B2Q15466 257 aa19■□□□□ 0.63
NME3-204ENST00000563498 FAM102AQ5T9C2 384 aaPredicted RBP19■□□□□ 0.63
NME3-204ENST00000563498 WDR48Q8TAF3 677 aa19■□□□□ 0.63
NME3-204ENST00000563498 TTC9Q92623 222 aa19■□□□□ 0.63
NME3-204ENST00000563498 ATXN7L3BQ96GX2 97 aa19■□□□□ 0.63
NME3-204ENST00000563498 TBATAQ96M53 351 aa19■□□□□ 0.63
NME3-204ENST00000563498 IL12RB2Q99665 862 aa19■□□□□ 0.63
NME3-204ENST00000563498 BOCQ9BWV1 1114 aa19■□□□□ 0.63
NME3-204ENST00000563498 SPASTQ9UBP0 616 aa19■□□□□ 0.63
NME3-204ENST00000563498 COL6A6A6NMZ7 2263 aa18.99■□□□□ 0.63
NME3-204ENST00000563498 IGLON5A6NGN9 336 aa18.99■□□□□ 0.63
NME3-204ENST00000563498 SPINT1O43278 529 aa18.99■□□□□ 0.63
NME3-204ENST00000563498 FLT3P36888 993 aa18.99■□□□□ 0.63
NME3-204ENST00000563498 ETFBP38117 255 aa18.99■□□□□ 0.63
NME3-204ENST00000563498 RPIAP49247 311 aa18.99■□□□□ 0.63
NME3-204ENST00000563498 EIF2B5Q13144 721 aaKnown RBP18.99■□□□□ 0.63
NME3-204ENST00000563498 PTK2BQ14289 1009 aa18.99■□□□□ 0.63
NME3-204ENST00000563498 DEFB133Q30KQ1 61 aa18.99■□□□□ 0.63
NME3-204ENST00000563498 TPRG1LQ5T0D9 272 aa18.99■□□□□ 0.63
NME3-204ENST00000563498 ARCQ7LC44 396 aa18.99■□□□□ 0.63
NME3-204ENST00000563498 XYLT1Q86Y38 959 aa18.99■□□□□ 0.63
NME3-204ENST00000563498 IRF2BP1Q8IU81 584 aa18.99■□□□□ 0.63
NME3-204ENST00000563498 LMX1AQ8TE12 382 aa18.99■□□□□ 0.63
NME3-204ENST00000563498 GLMNQ92990 594 aa18.99■□□□□ 0.63
NME3-204ENST00000563498 NAT6Q93015 286 aa18.99■□□□□ 0.63
NME3-204ENST00000563498 ARHGEF26Q96DR7 871 aa18.99■□□□□ 0.63
NME3-204ENST00000563498 PRR11Q96HE9 360 aaPredicted RBP18.99■□□□□ 0.63
NME3-204ENST00000563498 PDCL3Q9H2J4 239 aa18.99■□□□□ 0.63
NME3-204ENST00000563498 RETREG1Q9H6L5 497 aa18.99■□□□□ 0.63
NME3-204ENST00000563498 ZDHHC6Q9H6R6 413 aa18.99■□□□□ 0.63
NME3-204ENST00000563498 FCF1Q9Y324 198 aaKnown RBP18.99■□□□□ 0.63
NME3-204ENST00000563498 C16orf96A6NNT2 1141 aa18.98■□□□□ 0.63
NME3-204ENST00000563498 CDRT15L2A8MXV6 281 aa18.98■□□□□ 0.63
NME3-204ENST00000563498 CD160O95971 181 aa18.98■□□□□ 0.63
NME3-204ENST00000563498 PNMA6AP0CW24 399 aaPredicted RBP18.98■□□□□ 0.63
NME3-204ENST00000563498 C6P13671 934 aa18.98■□□□□ 0.63
NME3-204ENST00000563498 ABL2P42684 1182 aa18.98■□□□□ 0.63
NME3-204ENST00000563498 GEMIN4P57678 1058 aaKnown RBP18.98■□□□□ 0.63
NME3-204ENST00000563498 ZNF805Q5CZA5 627 aa18.98■□□□□ 0.63
NME3-204ENST00000563498 CLEC14AQ86T13 490 aa18.98■□□□□ 0.63
NME3-204ENST00000563498 ARL14Q8N4G2 192 aa18.98■□□□□ 0.63
NME3-204ENST00000563498 CENPTQ96BT3 561 aa18.98■□□□□ 0.63
NME3-204ENST00000563498 TMEM59LQ9UK28 342 aa18.98■□□□□ 0.63
NME3-204ENST00000563498 LMO7DNF2Z398 122 aa18.97■□□□□ 0.63
NME3-204ENST00000563498 K7ENP7 123 aa18.97■□□□□ 0.63
NME3-204ENST00000563498 NEMP1O14524 444 aa18.97■□□□□ 0.63
NME3-204ENST00000563498 LSM8O95777 96 aaKnown RBP18.97■□□□□ 0.63
NME3-204ENST00000563498 GSRP00390 522 aa18.97■□□□□ 0.63
NME3-204ENST00000563498 CYP11B1P15538 503 aa18.97■□□□□ 0.63
NME3-204ENST00000563498 THOP1P52888 689 aa18.97■□□□□ 0.63
NME3-204ENST00000563498 YPEL5P62699 121 aa18.97■□□□□ 0.63
NME3-204ENST00000563498 NRG1Q02297 640 aaPredicted RBP18.97■□□□□ 0.63
NME3-204ENST00000563498 C6orf132Q5T0Z8 1188 aa18.97■□□□□ 0.63
NME3-204ENST00000563498 TRNP1Q6NT89 227 aa18.97■□□□□ 0.63
NME3-204ENST00000563498 INO80CQ6PI98 192 aaPredicted RBP18.97■□□□□ 0.63
NME3-204ENST00000563498 FAM131BQ86XD5 332 aa18.97■□□□□ 0.63
NME3-204ENST00000563498 DRC7Q8IY82 874 aa18.97■□□□□ 0.63
NME3-204ENST00000563498 WDR36Q8NI36 951 aaKnown RBP18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms