RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 RLN3Q8WXF3 142 aa13.62□□□□□ -0.23
CDH1-204ENST00000562118 ECHDC3Q96DC8 303 aa13.62□□□□□ -0.23
CDH1-204ENST00000562118 ALS2CR12Q96Q35 445 aa13.62□□□□□ -0.23
CDH1-204ENST00000562118 TUBGCP5Q96RT8 1024 aa13.62□□□□□ -0.23
CDH1-204ENST00000562118 IL12RB2Q99665 862 aa13.62□□□□□ -0.23
CDH1-204ENST00000562118 TLR10Q9BXR5 811 aa13.62□□□□□ -0.23
CDH1-204ENST00000562118 OSBPL1AQ9BXW6 950 aa13.62□□□□□ -0.23
CDH1-204ENST00000562118 OSBPL8Q9BZF1 889 aa13.62□□□□□ -0.23
CDH1-204ENST00000562118 CARD9Q9H257 536 aa13.62□□□□□ -0.23
CDH1-204ENST00000562118 KDM4CQ9H3R0 1056 aa13.62□□□□□ -0.23
CDH1-204ENST00000562118 SGK2Q9HBY8 427 aa13.62□□□□□ -0.23
CDH1-204ENST00000562118 FAM86C1Q9NVL1 165 aa13.62□□□□□ -0.23
CDH1-204ENST00000562118 HECAQ9UBI9 543 aaPredicted RBP13.62□□□□□ -0.23
CDH1-204ENST00000562118 DKK3Q9UBP4 350 aa13.62□□□□□ -0.23
CDH1-204ENST00000562118 PYCARDQ9ULZ3 195 aa13.62□□□□□ -0.23
CDH1-204ENST00000562118 FARP1Q9Y4F1 1045 aaPredicted RBP13.62□□□□□ -0.23
CDH1-204ENST00000562118 PIEZO1Q92508 2521 aa13.62□□□□□ -0.23
CDH1-204ENST00000562118 LRRK1Q38SD2 2015 aa13.61□□□□□ -0.23
CDH1-204ENST00000562118 CACNA1EQ15878 2313 aa13.61□□□□□ -0.23
CDH1-204ENST00000562118 C1QTNF3-AMACRE9PGA6 284 aa13.61□□□□□ -0.23
CDH1-204ENST00000562118 TRAFD1O14545 582 aaPredicted RBP13.61□□□□□ -0.23
CDH1-204ENST00000562118 PLRG1O43660 514 aaKnown RBP13.61□□□□□ -0.23
CDH1-204ENST00000562118 IGSF6O95976 241 aa13.61□□□□□ -0.23
CDH1-204ENST00000562118 PTMAP06454 111 aaKnown RBP13.61□□□□□ -0.23
CDH1-204ENST00000562118 TNNT1P13805 278 aa13.61□□□□□ -0.23
CDH1-204ENST00000562118 RENBPP51606 427 aa13.61□□□□□ -0.23
CDH1-204ENST00000562118 TAS2R38P59533 333 aa13.61□□□□□ -0.23
CDH1-204ENST00000562118 RHOAP61586 193 aa13.61□□□□□ -0.23
CDH1-204ENST00000562118 SFSWAPQ12872 951 aaKnown RBP13.61□□□□□ -0.23
CDH1-204ENST00000562118 XRCC4Q13426 336 aa13.61□□□□□ -0.23
CDH1-204ENST00000562118 PDK1Q15118 436 aa13.61□□□□□ -0.23
CDH1-204ENST00000562118 ZFYVE27Q5T4F4 411 aa13.61□□□□□ -0.23
CDH1-204ENST00000562118 ATXN7L2Q5T6C5 722 aaPredicted RBP13.61□□□□□ -0.23
CDH1-204ENST00000562118 NPNTQ6UXI9 565 aa13.61□□□□□ -0.23
CDH1-204ENST00000562118 BZW1Q7L1Q6 419 aaKnown RBP13.61□□□□□ -0.23
CDH1-204ENST00000562118 RFX6Q8HWS3 928 aa13.61□□□□□ -0.23
CDH1-204ENST00000562118 FAM160A2Q8N612 972 aaPredicted RBP13.61□□□□□ -0.23
CDH1-204ENST00000562118 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.61□□□□□ -0.23
CDH1-204ENST00000562118 ARRDC3Q96B67 414 aa13.61□□□□□ -0.23
CDH1-204ENST00000562118 TADA1Q96BN2 335 aa13.61□□□□□ -0.23
CDH1-204ENST00000562118 ERLEC1Q96DZ1 483 aa13.61□□□□□ -0.23
CDH1-204ENST00000562118 QKIQ96PU8 341 aaKnown RBP eCLIP13.61□□□□□ -0.23
CDH1-204ENST00000562118 NUDCD1Q96RS6 583 aa13.61□□□□□ -0.23
CDH1-204ENST00000562118 PHOX2BQ99453 314 aa13.61□□□□□ -0.23
CDH1-204ENST00000562118 LGMNQ99538 433 aa13.61□□□□□ -0.23
CDH1-204ENST00000562118 MAK16Q9BXY0 300 aaKnown RBP13.61□□□□□ -0.23
CDH1-204ENST00000562118 TM6SF2Q9BZW4 377 aa13.61□□□□□ -0.23
CDH1-204ENST00000562118 CYP8B1Q9UNU6 501 aa13.61□□□□□ -0.23
CDH1-204ENST00000562118 SMG5Q9UPR3 1016 aaKnown RBP13.61□□□□□ -0.23
CDH1-204ENST00000562118 ATP8A1Q9Y2Q0 1164 aa13.61□□□□□ -0.23
CDH1-204ENST00000562118 PCDH15Q96QU1 1955 aa13.61□□□□□ -0.23
CDH1-204ENST00000562118 GVINP1Q7Z2Y8 2422 aa13.61□□□□□ -0.23
CDH1-204ENST00000562118 PLXNA2O75051 1894 aa13.61□□□□□ -0.23
CDH1-204ENST00000562118 ZFHX2Q9C0A1 2572 aaPredicted RBP13.61□□□□□ -0.23
CDH1-204ENST00000562118 PRR23AA6NEV1 266 aa13.6□□□□□ -0.23
CDH1-204ENST00000562118 HACD1B0YJ81 288 aa13.6□□□□□ -0.23
CDH1-204ENST00000562118 PPP1R12AO14974 1030 aaPredicted RBP13.6□□□□□ -0.23
CDH1-204ENST00000562118 SPINT1O43278 529 aa13.6□□□□□ -0.23
CDH1-204ENST00000562118 HTRA2O43464 458 aaPredicted RBP13.6□□□□□ -0.23
CDH1-204ENST00000562118 AP1G1O43747 822 aa13.6□□□□□ -0.23
CDH1-204ENST00000562118 EPN2O95208 641 aa13.6□□□□□ -0.23
CDH1-204ENST00000562118 MAP3K6O95382 1288 aa13.6□□□□□ -0.23
CDH1-204ENST00000562118 IL1BP01584 269 aa13.6□□□□□ -0.23
CDH1-204ENST00000562118 ACADMP11310 421 aa13.6□□□□□ -0.23
CDH1-204ENST00000562118 ACSL1P33121 698 aa13.6□□□□□ -0.23
CDH1-204ENST00000562118 MMP13P45452 471 aa13.6□□□□□ -0.23
CDH1-204ENST00000562118 MAPK8P45983 427 aa13.6□□□□□ -0.23
CDH1-204ENST00000562118 RECQLP46063 649 aaPredicted RBP13.6□□□□□ -0.23
CDH1-204ENST00000562118 PSMD8P48556 350 aa13.6□□□□□ -0.23
CDH1-204ENST00000562118 ADPRHP54922 357 aa13.6□□□□□ -0.23
CDH1-204ENST00000562118 AP1S1P61966 158 aa13.6□□□□□ -0.23
CDH1-204ENST00000562118 SIM2Q14190 667 aaPredicted RBP13.6□□□□□ -0.23
CDH1-204ENST00000562118 IHHQ14623 411 aa13.6□□□□□ -0.23
CDH1-204ENST00000562118 SLC14A2Q15849 920 aa13.6□□□□□ -0.23
CDH1-204ENST00000562118 ZNF805Q5CZA5 627 aa13.6□□□□□ -0.23
CDH1-204ENST00000562118 ARSIQ5FYB1 569 aa13.6□□□□□ -0.23
CDH1-204ENST00000562118 MARC1Q5VT66 337 aa13.6□□□□□ -0.23
CDH1-204ENST00000562118 LAIR1Q6GTX8 287 aa13.6□□□□□ -0.23
CDH1-204ENST00000562118 AADACL2Q6P093 401 aa13.6□□□□□ -0.23
CDH1-204ENST00000562118 NCEH1Q6PIU2 408 aa13.6□□□□□ -0.23
CDH1-204ENST00000562118 ZNF354CQ86Y25 554 aa13.6□□□□□ -0.23
CDH1-204ENST00000562118 SLC41A1Q8IVJ1 513 aa13.6□□□□□ -0.23
CDH1-204ENST00000562118 CCDC13Q8IYE1 715 aa13.6□□□□□ -0.23
CDH1-204ENST00000562118 PGBD3Q8N328 593 aa13.6□□□□□ -0.23
CDH1-204ENST00000562118 CNTD1Q8N815 330 aa13.6□□□□□ -0.23
CDH1-204ENST00000562118 TOE1Q96GM8 510 aaKnown RBP13.6□□□□□ -0.23
CDH1-204ENST00000562118 ZNF641Q96N77 438 aaPredicted RBP13.6□□□□□ -0.23
CDH1-204ENST00000562118 ORAI3Q9BRQ5 295 aa13.6□□□□□ -0.23
CDH1-204ENST00000562118 CINPQ9BW66 212 aaPredicted RBP13.6□□□□□ -0.23
CDH1-204ENST00000562118 NEUROG2Q9H2A3 272 aa13.6□□□□□ -0.23
CDH1-204ENST00000562118 FBXL12Q9NXK8 326 aa13.6□□□□□ -0.23
CDH1-204ENST00000562118 TPX2Q9ULW0 747 aaKnown RBP13.6□□□□□ -0.23
CDH1-204ENST00000562118 DMXL1Q9Y485 3027 aa13.6□□□□□ -0.23
CDH1-204ENST00000562118 DNAH14Q0VDD8 3507 aa13.59□□□□□ -0.23
CDH1-204ENST00000562118 A0A1W2PP55 124 aa13.59□□□□□ -0.23
CDH1-204ENST00000562118 GOLGA6L9A6NEM1 432 aa13.59□□□□□ -0.23
CDH1-204ENST00000562118 USP27XA6NNY8 438 aa13.59□□□□□ -0.23
CDH1-204ENST00000562118 INSIG1O15503 277 aa13.59□□□□□ -0.23
CDH1-204ENST00000562118 LATO43561 262 aa13.59□□□□□ -0.23
CDH1-204ENST00000562118 SOCS5O75159 536 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms