RNA–Protein interactions for RNA: ENST00000560674.5

SYNM-203, Transcript of synemin, humanhuman

TSL 1 (best) BASIC

Gene SYNM, Length 5,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-203ENST00000560674 MYDGFQ969H8 173 aa12.78□□□□□ -0.36
SYNM-203ENST00000560674 RNF157Q96PX1 679 aa12.78□□□□□ -0.36
SYNM-203ENST00000560674 ETAA1Q9NY74 926 aa12.78□□□□□ -0.36
SYNM-203ENST00000560674 ADRB2P07550 413 aa12.78□□□□□ -0.36
SYNM-203ENST00000560674 GLRA2P23416 452 aa12.78□□□□□ -0.36
SYNM-203ENST00000560674 USP46P62068 366 aa12.78□□□□□ -0.36
SYNM-203ENST00000560674 IRF8Q02556 426 aa12.78□□□□□ -0.36
SYNM-203ENST00000560674 USP45Q70EL2 814 aa12.78□□□□□ -0.36
SYNM-203ENST00000560674 RDH11Q8TC12 318 aa12.78□□□□□ -0.36
SYNM-203ENST00000560674 MAGEC3Q8TD91 643 aa12.78□□□□□ -0.36
SYNM-203ENST00000560674 SNRNP25Q9BV90 132 aaKnown RBP12.78□□□□□ -0.36
SYNM-203ENST00000560674 POLR1BQ9H9Y6 1135 aa12.78□□□□□ -0.36
SYNM-203ENST00000560674 CLN6Q9NWW5 311 aa12.78□□□□□ -0.36
SYNM-203ENST00000560674 PCDHB12Q9Y5F1 795 aa12.78□□□□□ -0.36
SYNM-203ENST00000560674 CATP04040 527 aaKnown RBP12.78□□□□□ -0.36
SYNM-203ENST00000560674 SERPINA4P29622 427 aa12.78□□□□□ -0.36
SYNM-203ENST00000560674 FAM20CQ8IXL6 584 aa12.78□□□□□ -0.36
SYNM-203ENST00000560674 GLIS3Q8NEA6 775 aa12.78□□□□□ -0.36
SYNM-203ENST00000560674 DNAJB14Q8TBM8 379 aa12.78□□□□□ -0.36
SYNM-203ENST00000560674 PLGRKTQ9HBL7 147 aa12.78□□□□□ -0.36
SYNM-203ENST00000560674 PNPLA3Q9NST1 481 aa12.78□□□□□ -0.36
SYNM-203ENST00000560674 SPG21Q9NZD8 308 aa12.78□□□□□ -0.36
SYNM-203ENST00000560674 DPP7Q9UHL4 492 aa12.78□□□□□ -0.36
SYNM-203ENST00000560674 BANF1O75531 89 aa12.78□□□□□ -0.36
SYNM-203ENST00000560674 CALCAP01258 141 aa12.78□□□□□ -0.36
SYNM-203ENST00000560674 CD86P42081 329 aa12.78□□□□□ -0.36
SYNM-203ENST00000560674 SPESP1Q6UW49 350 aa12.78□□□□□ -0.36
SYNM-203ENST00000560674 C16orf59Q7L2K0 433 aa12.78□□□□□ -0.36
SYNM-203ENST00000560674 KBTBD8Q8NFY9 601 aa12.78□□□□□ -0.36
SYNM-203ENST00000560674 PPP3R2Q96LZ3 170 aa12.78□□□□□ -0.36
SYNM-203ENST00000560674 MRPL57Q9BQC6 102 aaKnown RBP12.78□□□□□ -0.36
SYNM-203ENST00000560674 ACP6Q9NPH0 428 aa12.78□□□□□ -0.36
SYNM-203ENST00000560674 UXTQ9UBK9 157 aaPredicted RBP12.78□□□□□ -0.36
SYNM-203ENST00000560674 GNPTGQ9UJJ9 305 aa12.78□□□□□ -0.36
SYNM-203ENST00000560674 HDAC3O15379 428 aa12.77□□□□□ -0.36
SYNM-203ENST00000560674 OR6A2O95222 327 aa12.77□□□□□ -0.36
SYNM-203ENST00000560674 NFKB1P19838 968 aa12.77□□□□□ -0.36
SYNM-203ENST00000560674 SRP54P61011 504 aaKnown RBP12.77□□□□□ -0.36
SYNM-203ENST00000560674 MAPKAPK3Q16644 382 aa12.77□□□□□ -0.36
SYNM-203ENST00000560674 DDI2Q5TDH0 399 aa12.77□□□□□ -0.36
SYNM-203ENST00000560674 PIWIL4Q7Z3Z4 852 aaKnown RBP12.77□□□□□ -0.36
SYNM-203ENST00000560674 REXO5Q96IC2 774 aaKnown RBP12.77□□□□□ -0.36
SYNM-203ENST00000560674 ACSS3Q9H6R3 686 aa12.77□□□□□ -0.36
SYNM-203ENST00000560674 KCNMB3Q9NPA1 279 aa12.77□□□□□ -0.36
SYNM-203ENST00000560674 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.77□□□□□ -0.36
SYNM-203ENST00000560674 ITGB1BP2Q9UKP3 347 aa12.77□□□□□ -0.36
SYNM-203ENST00000560674 PACSIN3Q9UKS6 424 aa12.77□□□□□ -0.36
SYNM-203ENST00000560674 IKZF3Q9UKT9 509 aa12.77□□□□□ -0.36
SYNM-203ENST00000560674 TECPR2O15040 1411 aa12.77□□□□□ -0.36
SYNM-203ENST00000560674 ATXN2Q99700 1313 aaKnown RBP12.77□□□□□ -0.36
SYNM-203ENST00000560674 DYTNA2CJ06 578 aa12.77□□□□□ -0.36
SYNM-203ENST00000560674 RCCD1A6NED2 376 aa12.77□□□□□ -0.36
SYNM-203ENST00000560674 ANKDD1BA6NHY2 528 aa12.77□□□□□ -0.36
SYNM-203ENST00000560674 PTPN1P18031 435 aaKnown RBP12.77□□□□□ -0.36
SYNM-203ENST00000560674 TFEBP19484 476 aa12.77□□□□□ -0.36
SYNM-203ENST00000560674 CCT3P49368 545 aaKnown RBP12.77□□□□□ -0.36
SYNM-203ENST00000560674 RAB10P61026 200 aa12.77□□□□□ -0.36
SYNM-203ENST00000560674 GTF2BQ00403 316 aa12.77□□□□□ -0.36
SYNM-203ENST00000560674 KIFC1Q9BW19 673 aa12.77□□□□□ -0.36
SYNM-203ENST00000560674 OSBPL11Q9BXB4 747 aa12.77□□□□□ -0.36
SYNM-203ENST00000560674 EPHB6O15197 1021 aa12.77□□□□□ -0.37
SYNM-203ENST00000560674 KLRC4O43908 158 aa12.77□□□□□ -0.37
SYNM-203ENST00000560674 MTA2O94776 668 aa12.77□□□□□ -0.37
SYNM-203ENST00000560674 ZNF37AP17032 561 aaPredicted RBP12.77□□□□□ -0.37
SYNM-203ENST00000560674 SETMARQ53H47 684 aaPredicted RBP12.77□□□□□ -0.37
SYNM-203ENST00000560674 ARHGAP36Q6ZRI8 547 aa12.77□□□□□ -0.37
SYNM-203ENST00000560674 SLC16A10Q8TF71 515 aa12.77□□□□□ -0.37
SYNM-203ENST00000560674 NARS2Q96I59 477 aaKnown RBP12.77□□□□□ -0.37
SYNM-203ENST00000560674 Q96MT0 163 aa12.77□□□□□ -0.37
SYNM-203ENST00000560674 SLC4A5Q9BY07 1137 aa12.77□□□□□ -0.37
SYNM-203ENST00000560674 CLIC5Q9NZA1 410 aa12.77□□□□□ -0.37
SYNM-203ENST00000560674 MBD2Q9UBB5 411 aa12.77□□□□□ -0.37
SYNM-203ENST00000560674 CPA4Q9UI42 421 aa12.77□□□□□ -0.37
SYNM-203ENST00000560674 NUDT5Q9UKK9 219 aa12.77□□□□□ -0.37
SYNM-203ENST00000560674 LYVE1Q9Y5Y7 322 aa12.77□□□□□ -0.37
SYNM-203ENST00000560674 ADGRB1O14514 1584 aa12.77□□□□□ -0.37
SYNM-203ENST00000560674 NUDT14O95848 222 aa12.77□□□□□ -0.37
SYNM-203ENST00000560674 GABRB2P47870 512 aa12.77□□□□□ -0.37
SYNM-203ENST00000560674 MARCKSL1P49006 195 aa12.77□□□□□ -0.37
SYNM-203ENST00000560674 SPIDRQ14159 915 aa12.77□□□□□ -0.37
SYNM-203ENST00000560674 ATP13A4Q4VNC1 1196 aa12.77□□□□□ -0.37
SYNM-203ENST00000560674 AAGABQ6PD74 315 aa12.77□□□□□ -0.37
SYNM-203ENST00000560674 RD3Q7Z3Z2 195 aa12.77□□□□□ -0.37
SYNM-203ENST00000560674 PHF13Q86YI8 300 aaPredicted RBP12.77□□□□□ -0.37
SYNM-203ENST00000560674 ZNF540Q8NDQ6 660 aa12.77□□□□□ -0.37
SYNM-203ENST00000560674 KCTD4Q8WVF5 259 aa12.77□□□□□ -0.37
SYNM-203ENST00000560674 CAPSLQ8WWF8 208 aa12.77□□□□□ -0.37
SYNM-203ENST00000560674 MYLPFQ96A32 169 aa12.77□□□□□ -0.37
SYNM-203ENST00000560674 VPS35Q96QK1 796 aa12.77□□□□□ -0.37
SYNM-203ENST00000560674 EBNA1BP2Q99848 306 aaKnown RBP12.77□□□□□ -0.37
SYNM-203ENST00000560674 MARCH2Q9P0N8 246 aa12.77□□□□□ -0.37
SYNM-203ENST00000560674 RSL24D1Q9UHA3 163 aaKnown RBP12.77□□□□□ -0.37
SYNM-203ENST00000560674 A0A088AWK7 358 aa12.77□□□□□ -0.37
SYNM-203ENST00000560674 A8MX80 341 aa12.77□□□□□ -0.37
SYNM-203ENST00000560674 SGTAO43765 313 aa12.77□□□□□ -0.37
SYNM-203ENST00000560674 RECQL4O94761 1208 aa12.77□□□□□ -0.37
SYNM-203ENST00000560674 NTRK1P04629 796 aa12.77□□□□□ -0.37
SYNM-203ENST00000560674 ITGA2BP08514 1039 aa12.77□□□□□ -0.37
SYNM-203ENST00000560674 ZNF10P21506 573 aaPredicted RBP12.77□□□□□ -0.37
SYNM-203ENST00000560674 AMPD2Q01433 879 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms