RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 HLA-BQ31612 363 aa13.18□□□□□ -0.3
CTDSPL2-209ENST00000560620 MYLK3Q32MK0 819 aa13.18□□□□□ -0.3
CTDSPL2-209ENST00000560620 INO80DQ53TQ3 878 aaPredicted RBP13.18□□□□□ -0.3
CTDSPL2-209ENST00000560620 PIP5KL1Q5T9C9 394 aa13.18□□□□□ -0.3
CTDSPL2-209ENST00000560620 TMCO3Q6UWJ1 677 aa13.18□□□□□ -0.3
CTDSPL2-209ENST00000560620 DEFB124Q8NES8 71 aa13.18□□□□□ -0.3
CTDSPL2-209ENST00000560620 C1orf216Q8TAB5 229 aa13.18□□□□□ -0.3
CTDSPL2-209ENST00000560620 TEKT4Q8WW24 435 aa13.18□□□□□ -0.3
CTDSPL2-209ENST00000560620 KLK6Q92876 244 aa13.18□□□□□ -0.3
CTDSPL2-209ENST00000560620 EXOC2Q96KP1 924 aa13.18□□□□□ -0.3
CTDSPL2-209ENST00000560620 ANP32EQ9BTT0 268 aa13.18□□□□□ -0.3
CTDSPL2-209ENST00000560620 LRRC19Q9H756 370 aa13.18□□□□□ -0.3
CTDSPL2-209ENST00000560620 SNX11Q9Y5W9 270 aa13.18□□□□□ -0.3
CTDSPL2-209ENST00000560620 PLXNA2O75051 1894 aa13.18□□□□□ -0.3
CTDSPL2-209ENST00000560620 PCDH15Q96QU1 1955 aa13.18□□□□□ -0.3
CTDSPL2-209ENST00000560620 A0A1W2PQU0 124 aa13.17□□□□□ -0.3
CTDSPL2-209ENST00000560620 RNF103O00237 685 aa13.17□□□□□ -0.3
CTDSPL2-209ENST00000560620 TM4SF5O14894 197 aa13.17□□□□□ -0.3
CTDSPL2-209ENST00000560620 SLC31A1O15431 190 aa13.17□□□□□ -0.3
CTDSPL2-209ENST00000560620 ADRB3P13945 408 aa13.17□□□□□ -0.3
CTDSPL2-209ENST00000560620 AMPD1P23109 780 aa13.17□□□□□ -0.3
CTDSPL2-209ENST00000560620 CD38P28907 300 aa13.17□□□□□ -0.3
CTDSPL2-209ENST00000560620 TAS2R38P59533 333 aa13.17□□□□□ -0.3
CTDSPL2-209ENST00000560620 DPYSQ14117 519 aa13.17□□□□□ -0.3
CTDSPL2-209ENST00000560620 MESDQ14696 234 aa13.17□□□□□ -0.3
CTDSPL2-209ENST00000560620 STAT4Q14765 748 aa13.17□□□□□ -0.3
CTDSPL2-209ENST00000560620 KIF19Q2TAC6 998 aa13.17□□□□□ -0.3
CTDSPL2-209ENST00000560620 ASTE1Q2TB18 679 aaPredicted RBP13.17□□□□□ -0.3
CTDSPL2-209ENST00000560620 SETMARQ53H47 684 aaPredicted RBP13.17□□□□□ -0.3
CTDSPL2-209ENST00000560620 ZNF805Q5CZA5 627 aa13.17□□□□□ -0.3
CTDSPL2-209ENST00000560620 CFAP58Q5T655 872 aa13.17□□□□□ -0.3
CTDSPL2-209ENST00000560620 TXNRD3NBQ6F5E7 133 aa13.17□□□□□ -0.3
CTDSPL2-209ENST00000560620 GDPD4Q6W3E5 623 aa13.17□□□□□ -0.3
CTDSPL2-209ENST00000560620 POLNQ7Z5Q5 900 aa13.17□□□□□ -0.3
CTDSPL2-209ENST00000560620 PLPP6Q8IY26 295 aa13.17□□□□□ -0.3
CTDSPL2-209ENST00000560620 LZTR1Q8N653 840 aa13.17□□□□□ -0.3
CTDSPL2-209ENST00000560620 NPWQ8N729 165 aa13.17□□□□□ -0.3
CTDSPL2-209ENST00000560620 KCTD6Q8NC69 237 aa13.17□□□□□ -0.3
CTDSPL2-209ENST00000560620 SLC35G2Q8TBE7 412 aa13.17□□□□□ -0.3
CTDSPL2-209ENST00000560620 LRIG1Q96JA1 1093 aa13.17□□□□□ -0.3
CTDSPL2-209ENST00000560620 KLHL32Q96NJ5 620 aa13.17□□□□□ -0.3
CTDSPL2-209ENST00000560620 CSPG4P5Q96PW8 444 aa13.17□□□□□ -0.3
CTDSPL2-209ENST00000560620 MYOCQ99972 504 aa13.17□□□□□ -0.3
CTDSPL2-209ENST00000560620 CINPQ9BW66 212 aaPredicted RBP13.17□□□□□ -0.3
CTDSPL2-209ENST00000560620 CALN1Q9BXU9 219 aa13.17□□□□□ -0.3
CTDSPL2-209ENST00000560620 OSBPL1AQ9BXW6 950 aa13.17□□□□□ -0.3
CTDSPL2-209ENST00000560620 HDAC8Q9BY41 377 aa13.17□□□□□ -0.3
CTDSPL2-209ENST00000560620 EBF2Q9HAK2 575 aa13.17□□□□□ -0.3
CTDSPL2-209ENST00000560620 IL21RQ9HBE5 538 aa13.17□□□□□ -0.3
CTDSPL2-209ENST00000560620 OSGEPQ9NPF4 335 aa13.17□□□□□ -0.3
CTDSPL2-209ENST00000560620 DNAAF2Q9NVR5 837 aaKnown RBP13.17□□□□□ -0.3
CTDSPL2-209ENST00000560620 LCMT1Q9UIC8 334 aa13.17□□□□□ -0.3
CTDSPL2-209ENST00000560620 NENFQ9UMX5 172 aa13.17□□□□□ -0.3
CTDSPL2-209ENST00000560620 PCDHB9Q9Y5E1 797 aa13.17□□□□□ -0.3
CTDSPL2-209ENST00000560620 C16orf96A6NNT2 1141 aa13.16□□□□□ -0.3
CTDSPL2-209ENST00000560620 KCNK3O14649 394 aa13.16□□□□□ -0.3
CTDSPL2-209ENST00000560620 GIPC1O14908 333 aa13.16□□□□□ -0.3
CTDSPL2-209ENST00000560620 VILLO15195 856 aa13.16□□□□□ -0.3
CTDSPL2-209ENST00000560620 LATO43561 262 aa13.16□□□□□ -0.3
CTDSPL2-209ENST00000560620 PRAMEF11O60813 436 aa13.16□□□□□ -0.3
CTDSPL2-209ENST00000560620 PROSCO94903 275 aa13.16□□□□□ -0.3
CTDSPL2-209ENST00000560620 CEACAM1P13688 526 aa13.16□□□□□ -0.3
CTDSPL2-209ENST00000560620 PRLRP16471 622 aa13.16□□□□□ -0.3
CTDSPL2-209ENST00000560620 XPAP23025 273 aaPredicted RBP13.16□□□□□ -0.3
CTDSPL2-209ENST00000560620 SERPINB6P35237 376 aa13.16□□□□□ -0.3
CTDSPL2-209ENST00000560620 NUDT1P36639 197 aa13.16□□□□□ -0.3
CTDSPL2-209ENST00000560620 ZNF75DP51815 510 aa13.16□□□□□ -0.3
CTDSPL2-209ENST00000560620 SLC25A11Q02978 314 aaKnown RBP13.16□□□□□ -0.3
CTDSPL2-209ENST00000560620 TBX2Q13207 712 aaPredicted RBP13.16□□□□□ -0.3
CTDSPL2-209ENST00000560620 SLC14A1Q13336 389 aa13.16□□□□□ -0.3
CTDSPL2-209ENST00000560620 ODF2Q5BJF6 829 aa13.16□□□□□ -0.3
CTDSPL2-209ENST00000560620 NAPEPLDQ6IQ20 393 aa13.16□□□□□ -0.3
CTDSPL2-209ENST00000560620 PARS2Q7L3T8 475 aaKnown RBP13.16□□□□□ -0.3
CTDSPL2-209ENST00000560620 TRIM69Q86WT6 500 aa13.16□□□□□ -0.3
CTDSPL2-209ENST00000560620 RHOT2Q8IXI1 618 aa13.16□□□□□ -0.3
CTDSPL2-209ENST00000560620 SETD7Q8WTS6 366 aaKnown RBP13.16□□□□□ -0.3
CTDSPL2-209ENST00000560620 FAM131CQ96AQ9 280 aa13.16□□□□□ -0.3
CTDSPL2-209ENST00000560620 PCDH18Q9HCL0 1135 aa13.16□□□□□ -0.3
CTDSPL2-209ENST00000560620 TM7SF3Q9NS93 570 aa13.16□□□□□ -0.3
CTDSPL2-209ENST00000560620 KLHL11Q9NVR0 708 aa13.16□□□□□ -0.3
CTDSPL2-209ENST00000560620 DMTF1Q9Y222 760 aa13.16□□□□□ -0.3
CTDSPL2-209ENST00000560620 FNDC3AQ9Y2H6 1198 aaKnown RBP13.16□□□□□ -0.3
CTDSPL2-209ENST00000560620 PRAMEF26H0Y7S4 382 aa13.15□□□□□ -0.3
CTDSPL2-209ENST00000560620 WNT9AO14904 365 aa13.15□□□□□ -0.3
CTDSPL2-209ENST00000560620 KRT7P08729 469 aa13.15□□□□□ -0.3
CTDSPL2-209ENST00000560620 CSRP1P21291 193 aaKnown RBP13.15□□□□□ -0.3
CTDSPL2-209ENST00000560620 BNC1Q01954 994 aa13.15□□□□□ -0.3
CTDSPL2-209ENST00000560620 MMRN1Q13201 1228 aa13.15□□□□□ -0.3
CTDSPL2-209ENST00000560620 CYTH1Q15438 398 aa13.15□□□□□ -0.3
CTDSPL2-209ENST00000560620 ATP13A4Q4VNC1 1196 aa13.15□□□□□ -0.3
CTDSPL2-209ENST00000560620 LRRC73Q5JTD7 316 aa13.15□□□□□ -0.3
CTDSPL2-209ENST00000560620 PRAMEF14Q5SWL7 426 aa13.15□□□□□ -0.3
CTDSPL2-209ENST00000560620 NEK5Q6P3R8 708 aa13.15□□□□□ -0.3
CTDSPL2-209ENST00000560620 ARHGAP36Q6ZRI8 547 aa13.15□□□□□ -0.3
CTDSPL2-209ENST00000560620 TTC7BQ86TV6 843 aa13.15□□□□□ -0.3
CTDSPL2-209ENST00000560620 HORMAD1Q86X24 394 aa13.15□□□□□ -0.3
CTDSPL2-209ENST00000560620 CPNE8Q86YQ8 564 aa13.15□□□□□ -0.3
CTDSPL2-209ENST00000560620 MAP7D3Q8IWC1 876 aa13.15□□□□□ -0.3
CTDSPL2-209ENST00000560620 ARHGAP12Q8IWW6 846 aa13.15□□□□□ -0.3
CTDSPL2-209ENST00000560620 NSMCE1Q8WV22 266 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms