RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 TAS2R38P59533 333 aa11.05□□□□□ -0.64
TPM1-217ENST00000559108 IFI35P80217 286 aaPredicted RBP11.05□□□□□ -0.64
TPM1-217ENST00000559108 AP1B1Q10567 949 aa11.05□□□□□ -0.64
TPM1-217ENST00000559108 MYLK3Q32MK0 819 aa11.05□□□□□ -0.64
TPM1-217ENST00000559108 ZNF528Q3MIS6 628 aa11.05□□□□□ -0.64
TPM1-217ENST00000559108 ARSIQ5FYB1 569 aa11.05□□□□□ -0.64
TPM1-217ENST00000559108 LRRC73Q5JTD7 316 aa11.05□□□□□ -0.64
TPM1-217ENST00000559108 ZNF776Q68DI1 518 aaPredicted RBP11.05□□□□□ -0.64
TPM1-217ENST00000559108 ALG1LQ6GMV1 187 aa11.05□□□□□ -0.64
TPM1-217ENST00000559108 PRUNE1Q86TP1 453 aa11.05□□□□□ -0.64
TPM1-217ENST00000559108 WDR5BQ86VZ2 330 aa11.05□□□□□ -0.64
TPM1-217ENST00000559108 CAMK1DQ8IU85 385 aa11.05□□□□□ -0.64
TPM1-217ENST00000559108 RASGEF1CQ8N431 466 aa11.05□□□□□ -0.64
TPM1-217ENST00000559108 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.05□□□□□ -0.64
TPM1-217ENST00000559108 GLIS1Q8NBF1 620 aa11.05□□□□□ -0.64
TPM1-217ENST00000559108 CCNYQ8ND76 341 aa11.05□□□□□ -0.64
TPM1-217ENST00000559108 CCDC26Q8TAB7 109 aa11.05□□□□□ -0.64
TPM1-217ENST00000559108 PIP4K2CQ8TBX8 421 aa11.05□□□□□ -0.64
TPM1-217ENST00000559108 C1orf54Q8WWF1 131 aa11.05□□□□□ -0.64
TPM1-217ENST00000559108 CASKIN2Q8WXE0 1202 aa11.05□□□□□ -0.64
TPM1-217ENST00000559108 P3H4Q92791 437 aa11.05□□□□□ -0.64
TPM1-217ENST00000559108 FATE1Q969F0 183 aa11.05□□□□□ -0.64
TPM1-217ENST00000559108 OSBPL9Q96SU4 736 aa11.05□□□□□ -0.64
TPM1-217ENST00000559108 BRD8Q9H0E9 1235 aa11.05□□□□□ -0.64
TPM1-217ENST00000559108 PABPC3Q9H361 631 aaKnown RBP11.05□□□□□ -0.64
TPM1-217ENST00000559108 ZDHHC6Q9H6R6 413 aa11.05□□□□□ -0.64
TPM1-217ENST00000559108 USP29Q9HBJ7 922 aa11.05□□□□□ -0.64
TPM1-217ENST00000559108 POLMQ9NP87 494 aaPredicted RBP11.05□□□□□ -0.64
TPM1-217ENST00000559108 NT5MQ9NPB1 228 aa11.05□□□□□ -0.64
TPM1-217ENST00000559108 DONSONQ9NYP3 566 aa11.05□□□□□ -0.64
TPM1-217ENST00000559108 SUN2Q9UH99 717 aa11.05□□□□□ -0.64
TPM1-217ENST00000559108 GGT7Q9UJ14 662 aa11.05□□□□□ -0.64
TPM1-217ENST00000559108 DNPEPQ9ULA0 475 aa11.05□□□□□ -0.64
TPM1-217ENST00000559108 SNX12Q9UMY4 172 aa11.05□□□□□ -0.64
TPM1-217ENST00000559108 CYP8B1Q9UNU6 501 aa11.05□□□□□ -0.64
TPM1-217ENST00000559108 ATP8A1Q9Y2Q0 1164 aa11.05□□□□□ -0.64
TPM1-217ENST00000559108 SLCO1B1Q9Y6L6 691 aa11.05□□□□□ -0.64
TPM1-217ENST00000559108 A0A1W2PP55 124 aa11.04□□□□□ -0.64
TPM1-217ENST00000559108 GOLGA6L9A6NEM1 432 aa11.04□□□□□ -0.64
TPM1-217ENST00000559108 F5H423 210 aaPredicted RBP11.04□□□□□ -0.64
TPM1-217ENST00000559108 KRIT1O00522 736 aa11.04□□□□□ -0.64
TPM1-217ENST00000559108 CEP104O60308 925 aa11.04□□□□□ -0.64
TPM1-217ENST00000559108 IL1BP01584 269 aa11.04□□□□□ -0.64
TPM1-217ENST00000559108 JCHAINP01591 159 aa11.04□□□□□ -0.64
TPM1-217ENST00000559108 IGLV3-19P01714 112 aa11.04□□□□□ -0.64
TPM1-217ENST00000559108 FGGP02679 453 aa11.04□□□□□ -0.64
TPM1-217ENST00000559108 RBP3P10745 1247 aa11.04□□□□□ -0.64
TPM1-217ENST00000559108 SLC8A1P32418 973 aa11.04□□□□□ -0.64
TPM1-217ENST00000559108 ACSL1P33121 698 aa11.04□□□□□ -0.64
TPM1-217ENST00000559108 NNMTP40261 264 aa11.04□□□□□ -0.64
TPM1-217ENST00000559108 P2RY2P41231 377 aa11.04□□□□□ -0.64
TPM1-217ENST00000559108 GEMIN4P57678 1058 aaKnown RBP11.04□□□□□ -0.64
TPM1-217ENST00000559108 EIF3EP60228 445 aaKnown RBP11.04□□□□□ -0.64
TPM1-217ENST00000559108 SEMG2Q02383 582 aa11.04□□□□□ -0.64
TPM1-217ENST00000559108 CNTN1Q12860 1018 aa11.04□□□□□ -0.64
TPM1-217ENST00000559108 TRAF2Q12933 501 aa11.04□□□□□ -0.64
TPM1-217ENST00000559108 HNRNPDQ14103 355 aaKnown RBP11.04□□□□□ -0.64
TPM1-217ENST00000559108 PDK1Q15118 436 aa11.04□□□□□ -0.64
TPM1-217ENST00000559108 OASLQ15646 514 aaKnown RBP11.04□□□□□ -0.64
TPM1-217ENST00000559108 ODF2Q5BJF6 829 aa11.04□□□□□ -0.64
TPM1-217ENST00000559108 SLC45A4Q5BKX6 768 aa11.04□□□□□ -0.64
TPM1-217ENST00000559108 PIP5KL1Q5T9C9 394 aa11.04□□□□□ -0.64
TPM1-217ENST00000559108 SEL1L2Q5TEA6 688 aa11.04□□□□□ -0.64
TPM1-217ENST00000559108 AGBL4Q5VU57 503 aa11.04□□□□□ -0.64
TPM1-217ENST00000559108 NCEH1Q6PIU2 408 aa11.04□□□□□ -0.64
TPM1-217ENST00000559108 PARS2Q7L3T8 475 aaKnown RBP11.04□□□□□ -0.64
TPM1-217ENST00000559108 SRLQ86TD4 932 aa11.04□□□□□ -0.64
TPM1-217ENST00000559108 FAM124AQ86V42 546 aa11.04□□□□□ -0.64
TPM1-217ENST00000559108 LONP2Q86WA8 852 aa11.04□□□□□ -0.64
TPM1-217ENST00000559108 PLPP6Q8IY26 295 aa11.04□□□□□ -0.64
TPM1-217ENST00000559108 PGBD3Q8N328 593 aa11.04□□□□□ -0.64
TPM1-217ENST00000559108 RYBPQ8N488 228 aaPredicted RBP11.04□□□□□ -0.64
TPM1-217ENST00000559108 DEFB119Q8N690 84 aa11.04□□□□□ -0.64
TPM1-217ENST00000559108 PRELID2Q8N945 189 aa11.04□□□□□ -0.64
TPM1-217ENST00000559108 OR8D1Q8WZ84 308 aa11.04□□□□□ -0.64
TPM1-217ENST00000559108 SIPA1Q96FS4 1042 aa11.04□□□□□ -0.64
TPM1-217ENST00000559108 GDAP1L1Q96MZ0 367 aa11.04□□□□□ -0.64
TPM1-217ENST00000559108 HEPHQ9BQS7 1158 aa11.04□□□□□ -0.64
TPM1-217ENST00000559108 CINPQ9BW66 212 aaPredicted RBP11.04□□□□□ -0.64
TPM1-217ENST00000559108 NOD2Q9HC29 1040 aa11.04□□□□□ -0.64
TPM1-217ENST00000559108 ITM2CQ9NQX7 267 aa11.04□□□□□ -0.64
TPM1-217ENST00000559108 RBM22Q9NW64 420 aaKnown RBP eCLIP11.04□□□□□ -0.64
TPM1-217ENST00000559108 SEPT10Q9P0V9 454 aa11.04□□□□□ -0.64
TPM1-217ENST00000559108 BCCIPQ9P287 314 aaKnown RBP eCLIP11.04□□□□□ -0.64
TPM1-217ENST00000559108 SEPT3Q9UH03 358 aa11.04□□□□□ -0.64
TPM1-217ENST00000559108 IL36AQ9UHA7 158 aa11.04□□□□□ -0.64
TPM1-217ENST00000559108 A0A0U1RQS6 177 aa11.03□□□□□ -0.64
TPM1-217ENST00000559108 TRAFD1O14545 582 aaPredicted RBP11.03□□□□□ -0.64
TPM1-217ENST00000559108 ALOX15BO15296 676 aa11.03□□□□□ -0.64
TPM1-217ENST00000559108 ZBTB24O43167 697 aaPredicted RBP11.03□□□□□ -0.64
TPM1-217ENST00000559108 LIASO43766 372 aa11.03□□□□□ -0.64
TPM1-217ENST00000559108 TJP3O95049 919 aa11.03□□□□□ -0.64
TPM1-217ENST00000559108 IGSF6O95976 241 aa11.03□□□□□ -0.64
TPM1-217ENST00000559108 PRKCGP05129 697 aa11.03□□□□□ -0.64
TPM1-217ENST00000559108 UGT2B4P06133 528 aa11.03□□□□□ -0.64
TPM1-217ENST00000559108 MX2P20592 715 aa11.03□□□□□ -0.64
TPM1-217ENST00000559108 NUBP1P53384 320 aa11.03□□□□□ -0.64
TPM1-217ENST00000559108 SNRPD1P62314 119 aaKnown RBP11.03□□□□□ -0.64
TPM1-217ENST00000559108 XRCC4Q13426 336 aa11.03□□□□□ -0.64
TPM1-217ENST00000559108 ZNF235Q14590 738 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms