RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 CSTF1Q05048 431 aaKnown RBP12.61□□□□□ -0.39
GABPB1-208ENST00000558970 DMWDQ09019 674 aa12.61□□□□□ -0.39
GABPB1-208ENST00000558970 CAMK2GQ13555 558 aaPredicted RBP12.61□□□□□ -0.39
GABPB1-208ENST00000558970 RFTN1Q14699 578 aaPredicted RBP12.61□□□□□ -0.39
GABPB1-208ENST00000558970 ARSIQ5FYB1 569 aa12.61□□□□□ -0.39
GABPB1-208ENST00000558970 PRUNE1Q86TP1 453 aa12.61□□□□□ -0.39
GABPB1-208ENST00000558970 FAM124AQ86V42 546 aa12.61□□□□□ -0.39
GABPB1-208ENST00000558970 TMPRSS6Q8IU80 811 aa12.61□□□□□ -0.39
GABPB1-208ENST00000558970 LRRC49Q8IUZ0 686 aa12.61□□□□□ -0.39
GABPB1-208ENST00000558970 C1orf210Q8IVY1 113 aa12.61□□□□□ -0.39
GABPB1-208ENST00000558970 FAM71DQ8N9W8 422 aa12.61□□□□□ -0.39
GABPB1-208ENST00000558970 KDM1BQ8NB78 822 aa12.61□□□□□ -0.39
GABPB1-208ENST00000558970 MDGA1Q8NFP4 955 aa12.61□□□□□ -0.39
GABPB1-208ENST00000558970 OR2AP1Q8NGE2 309 aa12.61□□□□□ -0.39
GABPB1-208ENST00000558970 MAIP1Q8WWC4 291 aa12.61□□□□□ -0.39
GABPB1-208ENST00000558970 CASKIN2Q8WXE0 1202 aa12.61□□□□□ -0.39
GABPB1-208ENST00000558970 CEP44Q9C0F1 390 aa12.61□□□□□ -0.39
GABPB1-208ENST00000558970 SCUBE2Q9NQ36 999 aa12.61□□□□□ -0.39
GABPB1-208ENST00000558970 KLHL8Q9P2G9 620 aaPredicted RBP12.61□□□□□ -0.39
GABPB1-208ENST00000558970 IL36AQ9UHA7 158 aa12.61□□□□□ -0.39
GABPB1-208ENST00000558970 SARDHQ9UL12 918 aa12.61□□□□□ -0.39
GABPB1-208ENST00000558970 ZNF148Q9UQR1 794 aa12.61□□□□□ -0.39
GABPB1-208ENST00000558970 INVSQ9Y283 1065 aa12.61□□□□□ -0.39
GABPB1-208ENST00000558970 FARP1Q9Y4F1 1045 aaPredicted RBP12.61□□□□□ -0.39
GABPB1-208ENST00000558970 MYLKQ15746 1914 aa12.6□□□□□ -0.39
GABPB1-208ENST00000558970 TARSL2A2RTX5 802 aaKnown RBP12.6□□□□□ -0.39
GABPB1-208ENST00000558970 HACD1B0YJ81 288 aa12.6□□□□□ -0.39
GABPB1-208ENST00000558970 MID1O15344 667 aa12.6□□□□□ -0.39
GABPB1-208ENST00000558970 ZBTB24O43167 697 aaPredicted RBP12.6□□□□□ -0.39
GABPB1-208ENST00000558970 LEFTY1O75610 366 aa12.6□□□□□ -0.39
GABPB1-208ENST00000558970 GSRP00390 522 aa12.6□□□□□ -0.39
GABPB1-208ENST00000558970 IFNB1P01574 187 aa12.6□□□□□ -0.39
GABPB1-208ENST00000558970 UGT2B4P06133 528 aa12.6□□□□□ -0.39
GABPB1-208ENST00000558970 ETS1P14921 441 aa12.6□□□□□ -0.39
GABPB1-208ENST00000558970 CHRNA3P32297 505 aa12.6□□□□□ -0.39
GABPB1-208ENST00000558970 TERF1P54274 439 aa12.6□□□□□ -0.39
GABPB1-208ENST00000558970 IFI35P80217 286 aaPredicted RBP12.6□□□□□ -0.39
GABPB1-208ENST00000558970 TCF15Q12870 199 aa12.6□□□□□ -0.39
GABPB1-208ENST00000558970 XRCC4Q13426 336 aa12.6□□□□□ -0.39
GABPB1-208ENST00000558970 BYSLQ13895 437 aaKnown RBP12.6□□□□□ -0.39
GABPB1-208ENST00000558970 HNRNPDQ14103 355 aaKnown RBP12.6□□□□□ -0.39
GABPB1-208ENST00000558970 ELAVL3Q14576 367 aaKnown RBP12.6□□□□□ -0.39
GABPB1-208ENST00000558970 LRRC73Q5JTD7 316 aa12.6□□□□□ -0.39
GABPB1-208ENST00000558970 ZNF776Q68DI1 518 aaPredicted RBP12.6□□□□□ -0.39
GABPB1-208ENST00000558970 SRLQ86TD4 932 aa12.6□□□□□ -0.39
GABPB1-208ENST00000558970 METTL3Q86U44 580 aaKnown RBP12.6□□□□□ -0.39
GABPB1-208ENST00000558970 ZNF567Q8N184 647 aa12.6□□□□□ -0.39
GABPB1-208ENST00000558970 PRELID2Q8N945 189 aa12.6□□□□□ -0.39
GABPB1-208ENST00000558970 OR2T3Q8NH03 318 aa12.6□□□□□ -0.39
GABPB1-208ENST00000558970 SLC35B2Q8TB61 432 aa12.6□□□□□ -0.39
GABPB1-208ENST00000558970 PIP4K2CQ8TBX8 421 aa12.6□□□□□ -0.39
GABPB1-208ENST00000558970 CCDC110Q8TBZ0 833 aa12.6□□□□□ -0.39
GABPB1-208ENST00000558970 ACTRT1Q8TDG2 376 aa12.6□□□□□ -0.39
GABPB1-208ENST00000558970 GANCQ8TET4 914 aa12.6□□□□□ -0.39
GABPB1-208ENST00000558970 PDCD6IPQ8WUM4 868 aaKnown RBP12.6□□□□□ -0.39
GABPB1-208ENST00000558970 MAML1Q92585 1016 aa12.6□□□□□ -0.39
GABPB1-208ENST00000558970 PRCCQ92733 491 aaPredicted RBP12.6□□□□□ -0.39
GABPB1-208ENST00000558970 SIPA1Q96FS4 1042 aa12.6□□□□□ -0.39
GABPB1-208ENST00000558970 MRGPRX1Q96LB2 322 aa12.6□□□□□ -0.39
GABPB1-208ENST00000558970 PSKH2Q96QS6 385 aa12.6□□□□□ -0.39
GABPB1-208ENST00000558970 FAM129BQ96TA1 746 aa12.6□□□□□ -0.39
GABPB1-208ENST00000558970 NAP1L3Q99457 506 aaPredicted RBP12.6□□□□□ -0.39
GABPB1-208ENST00000558970 SEMA3CQ99985 751 aa12.6□□□□□ -0.39
GABPB1-208ENST00000558970 HEPHQ9BQS7 1158 aa12.6□□□□□ -0.39
GABPB1-208ENST00000558970 UBP1Q9NZI7 540 aa12.6□□□□□ -0.39
GABPB1-208ENST00000558970 CACNA1IQ9P0X4 2223 aa12.6□□□□□ -0.39
GABPB1-208ENST00000558970 K7ESF4 209 aa12.59□□□□□ -0.39
GABPB1-208ENST00000558970 PDE2AO00408 941 aaPredicted RBP12.59□□□□□ -0.39
GABPB1-208ENST00000558970 CES2O00748 559 aa12.59□□□□□ -0.39
GABPB1-208ENST00000558970 RNASEH1O60930 286 aaKnown RBP12.59□□□□□ -0.39
GABPB1-208ENST00000558970 ALDH1A2O94788 518 aa12.59□□□□□ -0.39
GABPB1-208ENST00000558970 APBB3O95704 486 aa12.59□□□□□ -0.39
GABPB1-208ENST00000558970 DNTTP04053 509 aa12.59□□□□□ -0.39
GABPB1-208ENST00000558970 ACADMP11310 421 aa12.59□□□□□ -0.39
GABPB1-208ENST00000558970 NFKB1P19838 968 aa12.59□□□□□ -0.39
GABPB1-208ENST00000558970 PAFAH1B1P43034 410 aa12.59□□□□□ -0.39
GABPB1-208ENST00000558970 FNTBP49356 437 aa12.59□□□□□ -0.39
GABPB1-208ENST00000558970 VASPP50552 380 aaPredicted RBP12.59□□□□□ -0.39
GABPB1-208ENST00000558970 RPS14P62263 151 aaKnown RBP12.59□□□□□ -0.39
GABPB1-208ENST00000558970 FOXK2Q01167 660 aa12.59□□□□□ -0.39
GABPB1-208ENST00000558970 WASHC5Q12768 1159 aa12.59□□□□□ -0.39
GABPB1-208ENST00000558970 CST6Q15828 149 aa12.59□□□□□ -0.39
GABPB1-208ENST00000558970 PCSK7Q16549 785 aa12.59□□□□□ -0.39
GABPB1-208ENST00000558970 MYLK3Q32MK0 819 aa12.59□□□□□ -0.39
GABPB1-208ENST00000558970 SYCP2LQ5T4T6 812 aa12.59□□□□□ -0.39
GABPB1-208ENST00000558970 FAXCQ5TGI0 409 aa12.59□□□□□ -0.39
GABPB1-208ENST00000558970 GSTA5Q7RTV2 222 aa12.59□□□□□ -0.39
GABPB1-208ENST00000558970 PID1Q7Z2X4 250 aa12.59□□□□□ -0.39
GABPB1-208ENST00000558970 KDELC2Q7Z4H8 507 aa12.59□□□□□ -0.39
GABPB1-208ENST00000558970 CAMK1DQ8IU85 385 aa12.59□□□□□ -0.39
GABPB1-208ENST00000558970 CREG2Q8IUH2 290 aa12.59□□□□□ -0.39
GABPB1-208ENST00000558970 KLHL7Q8IXQ5 586 aa12.59□□□□□ -0.39
GABPB1-208ENST00000558970 TEX26Q8N6G2 289 aa12.59□□□□□ -0.39
GABPB1-208ENST00000558970 CNTD1Q8N815 330 aa12.59□□□□□ -0.39
GABPB1-208ENST00000558970 RLN3Q8WXF3 142 aa12.59□□□□□ -0.39
GABPB1-208ENST00000558970 MAGOHBQ96A72 148 aaKnown RBP12.59□□□□□ -0.39
GABPB1-208ENST00000558970 ISG20Q96AZ6 181 aaKnown RBP12.59□□□□□ -0.39
GABPB1-208ENST00000558970 RBM15Q96T37 977 aaKnown RBP eCLIP12.59□□□□□ -0.397e-13■■■■■ 35
GABPB1-208ENST00000558970 IL12RB2Q99665 862 aa12.59□□□□□ -0.39
GABPB1-208ENST00000558970 FERMT1Q9BQL6 677 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms