RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 PRKCHP24723 683 aa12.64□□□□□ -0.39
SHMT2-221ENST00000555773 CD68P34810 354 aaPredicted RBP12.64□□□□□ -0.39
SHMT2-221ENST00000555773 PTGIRP43119 386 aa12.64□□□□□ -0.39
SHMT2-221ENST00000555773 SCNN1BP51168 640 aa12.64□□□□□ -0.39
SHMT2-221ENST00000555773 C2orf54Q08AI8 447 aa12.64□□□□□ -0.39
SHMT2-221ENST00000555773 CAMK2GQ13555 558 aaPredicted RBP12.64□□□□□ -0.39
SHMT2-221ENST00000555773 PRPSAP1Q14558 356 aa12.64□□□□□ -0.39
SHMT2-221ENST00000555773 ELAVL3Q14576 367 aaKnown RBP12.64□□□□□ -0.39
SHMT2-221ENST00000555773 SLC14A2Q15849 920 aa12.64□□□□□ -0.39
SHMT2-221ENST00000555773 GLE1Q53GS7 698 aaKnown RBP12.64□□□□□ -0.39
SHMT2-221ENST00000555773 MAMSTRQ6ZN01 415 aa12.64□□□□□ -0.39
SHMT2-221ENST00000555773 DPY19L3Q6ZPD9 716 aa12.64□□□□□ -0.39
SHMT2-221ENST00000555773 Q6ZVU0 165 aa12.64□□□□□ -0.39
SHMT2-221ENST00000555773 DSG4Q86SJ6 1040 aa12.64□□□□□ -0.39
SHMT2-221ENST00000555773 TXNDC5Q8NBS9 432 aaKnown RBP12.64□□□□□ -0.39
SHMT2-221ENST00000555773 FLCNQ8NFG4 579 aa12.64□□□□□ -0.39
SHMT2-221ENST00000555773 RPLP0P6Q8NHW5 317 aa12.64□□□□□ -0.39
SHMT2-221ENST00000555773 ARRDC2Q8TBH0 407 aa12.64□□□□□ -0.39
SHMT2-221ENST00000555773 CCDC110Q8TBZ0 833 aa12.64□□□□□ -0.39
SHMT2-221ENST00000555773 IMP4Q96G21 291 aaKnown RBP12.64□□□□□ -0.39
SHMT2-221ENST00000555773 TUBGCP5Q96RT8 1024 aa12.64□□□□□ -0.39
SHMT2-221ENST00000555773 HEPHQ9BQS7 1158 aa12.64□□□□□ -0.39
SHMT2-221ENST00000555773 TM6SF2Q9BZW4 377 aa12.64□□□□□ -0.39
SHMT2-221ENST00000555773 TNKS2Q9H2K2 1166 aa12.64□□□□□ -0.39
SHMT2-221ENST00000555773 PRSS16Q9NQE7 514 aa12.64□□□□□ -0.39
SHMT2-221ENST00000555773 RSPH14Q9UHP6 348 aa12.64□□□□□ -0.39
SHMT2-221ENST00000555773 MMP17Q9ULZ9 603 aa12.64□□□□□ -0.39
SHMT2-221ENST00000555773 NEU2Q9Y3R4 380 aa12.64□□□□□ -0.39
SHMT2-221ENST00000555773 TICRRQ7Z2Z1 1910 aa12.64□□□□□ -0.39
SHMT2-221ENST00000555773 CHD5Q8TDI0 1954 aa12.63□□□□□ -0.39
SHMT2-221ENST00000555773 COL4A2P08572 1712 aa12.63□□□□□ -0.39
SHMT2-221ENST00000555773 ANTXRLA6NF34 631 aa12.63□□□□□ -0.39
SHMT2-221ENST00000555773 TMEM221A6NGB7 291 aa12.63□□□□□ -0.39
SHMT2-221ENST00000555773 M0R296 226 aa12.63□□□□□ -0.39
SHMT2-221ENST00000555773 PSMD3O43242 534 aa12.63□□□□□ -0.39
SHMT2-221ENST00000555773 RNASEH1O60930 286 aaKnown RBP12.63□□□□□ -0.39
SHMT2-221ENST00000555773 ADAM23O75077 832 aa12.63□□□□□ -0.39
SHMT2-221ENST00000555773 ANXA9O76027 345 aa12.63□□□□□ -0.39
SHMT2-221ENST00000555773 SERPINF2P08697 491 aa12.63□□□□□ -0.39
SHMT2-221ENST00000555773 HLA-EP13747 358 aa12.63□□□□□ -0.39
SHMT2-221ENST00000555773 RPL22P35268 128 aaKnown RBP12.63□□□□□ -0.39
SHMT2-221ENST00000555773 FDFT1P37268 417 aa12.63□□□□□ -0.39
SHMT2-221ENST00000555773 CLCN5P51795 746 aa12.63□□□□□ -0.39
SHMT2-221ENST00000555773 PPP1R7Q15435 360 aa12.63□□□□□ -0.39
SHMT2-221ENST00000555773 CRY1Q16526 586 aa12.63□□□□□ -0.39
SHMT2-221ENST00000555773 NCEH1Q6PIU2 408 aa12.63□□□□□ -0.39
SHMT2-221ENST00000555773 SYT13Q7L8C5 426 aa12.63□□□□□ -0.39
SHMT2-221ENST00000555773 RYBPQ8N488 228 aaPredicted RBP12.63□□□□□ -0.39
SHMT2-221ENST00000555773 SPEM1Q8N4L4 309 aa12.63□□□□□ -0.39
SHMT2-221ENST00000555773 TMIEQ8NEW7 156 aa12.63□□□□□ -0.39
SHMT2-221ENST00000555773 HCAR2Q8TDS4 363 aa12.63□□□□□ -0.39
SHMT2-221ENST00000555773 OR8D1Q8WZ84 308 aa12.63□□□□□ -0.39
SHMT2-221ENST00000555773 ZNF419Q96HQ0 510 aaPredicted RBP12.63□□□□□ -0.39
SHMT2-221ENST00000555773 ZNF641Q96N77 438 aaPredicted RBP12.63□□□□□ -0.39
SHMT2-221ENST00000555773 FAM129BQ96TA1 746 aa12.63□□□□□ -0.39
SHMT2-221ENST00000555773 SEMA3CQ99985 751 aa12.63□□□□□ -0.39
SHMT2-221ENST00000555773 CEP41Q9BYV8 373 aa12.63□□□□□ -0.39
SHMT2-221ENST00000555773 GBA3Q9H227 469 aa12.63□□□□□ -0.39
SHMT2-221ENST00000555773 CHRDQ9H2X0 955 aa12.63□□□□□ -0.39
SHMT2-221ENST00000555773 NOD2Q9HC29 1040 aa12.63□□□□□ -0.39
SHMT2-221ENST00000555773 SCUBE2Q9NQ36 999 aa12.63□□□□□ -0.39
SHMT2-221ENST00000555773 VPS45Q9NRW7 570 aa12.63□□□□□ -0.39
SHMT2-221ENST00000555773 AAR2Q9Y312 384 aaKnown RBP12.63□□□□□ -0.39
SHMT2-221ENST00000555773 TTLL3Q9Y4R7 772 aa12.63□□□□□ -0.39
SHMT2-221ENST00000555773 BDP1A6H8Y1 2624 aa12.63□□□□□ -0.39
SHMT2-221ENST00000555773 A0A0C4DFX4 3053 aa12.62□□□□□ -0.39
SHMT2-221ENST00000555773 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.62□□□□□ -0.39
SHMT2-221ENST00000555773 A0A1W2PQ67 120 aa12.62□□□□□ -0.39
SHMT2-221ENST00000555773 A0A1W2PQF6 199 aa12.62□□□□□ -0.39
SHMT2-221ENST00000555773 GOLGA6CA6NDK9 693 aa12.62□□□□□ -0.39
SHMT2-221ENST00000555773 GOLGA6BA6NDN3 693 aa12.62□□□□□ -0.39
SHMT2-221ENST00000555773 SIN3BO75182 1162 aa12.62□□□□□ -0.39
SHMT2-221ENST00000555773 PRNPP04156 253 aa12.62□□□□□ -0.39
SHMT2-221ENST00000555773 ZSCAN5DPP0CG00 497 aa12.62□□□□□ -0.39
SHMT2-221ENST00000555773 GOLGA6DP0CG33 693 aa12.62□□□□□ -0.39
SHMT2-221ENST00000555773 C7P10643 843 aa12.62□□□□□ -0.39
SHMT2-221ENST00000555773 HOXB2P14652 356 aa12.62□□□□□ -0.39
SHMT2-221ENST00000555773 ETS1P14921 441 aa12.62□□□□□ -0.39
SHMT2-221ENST00000555773 AOC1P19801 751 aa12.62□□□□□ -0.39
SHMT2-221ENST00000555773 NFKB1P19838 968 aa12.62□□□□□ -0.39
SHMT2-221ENST00000555773 CA4P22748 312 aa12.62□□□□□ -0.39
SHMT2-221ENST00000555773 WASP42768 502 aa12.62□□□□□ -0.39
SHMT2-221ENST00000555773 RGRP47804 291 aa12.62□□□□□ -0.39
SHMT2-221ENST00000555773 CCNHP51946 323 aaPredicted RBP12.62□□□□□ -0.39
SHMT2-221ENST00000555773 DGKEP52429 567 aa12.62□□□□□ -0.39
SHMT2-221ENST00000555773 NRLP54845 237 aa12.62□□□□□ -0.39
SHMT2-221ENST00000555773 GEMP55040 296 aa12.62□□□□□ -0.39
SHMT2-221ENST00000555773 MAXP61244 160 aa12.62□□□□□ -0.39
SHMT2-221ENST00000555773 DSC2Q02487 901 aa12.62□□□□□ -0.39
SHMT2-221ENST00000555773 BCL2L1Q07817 233 aa12.62□□□□□ -0.39
SHMT2-221ENST00000555773 NIPAL4Q0D2K0 466 aa12.62□□□□□ -0.39
SHMT2-221ENST00000555773 PTK6Q13882 451 aa12.62□□□□□ -0.39
SHMT2-221ENST00000555773 ATXN7L2Q5T6C5 722 aaPredicted RBP12.62□□□□□ -0.39
SHMT2-221ENST00000555773 FAM46CQ5VWP2 391 aa12.62□□□□□ -0.39
SHMT2-221ENST00000555773 CCDC70Q6NSX1 233 aa12.62□□□□□ -0.39
SHMT2-221ENST00000555773 Q6ZS52 159 aa12.62□□□□□ -0.39
SHMT2-221ENST00000555773 BMP8AQ7Z5Y6 402 aa12.62□□□□□ -0.39
SHMT2-221ENST00000555773 JAMLQ86YT9 394 aa12.62□□□□□ -0.39
SHMT2-221ENST00000555773 KLHDC8BQ8IXV7 354 aa12.62□□□□□ -0.39
SHMT2-221ENST00000555773 STK40Q8N2I9 435 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms