RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 PRR33A8MZF0 331 aa12.41□□□□□ -0.42
SHMT2-209ENST00000553949 ALOX15BO15296 676 aa12.41□□□□□ -0.42
SHMT2-209ENST00000553949 INSIG1O15503 277 aa12.41□□□□□ -0.42
SHMT2-209ENST00000553949 ZBTB24O43167 697 aaPredicted RBP12.41□□□□□ -0.42
SHMT2-209ENST00000553949 PHF2O75151 1096 aa12.41□□□□□ -0.42
SHMT2-209ENST00000553949 GJB3O75712 270 aa12.41□□□□□ -0.42
SHMT2-209ENST00000553949 STK10O94804 968 aaKnown RBP12.41□□□□□ -0.42
SHMT2-209ENST00000553949 PAPSS2O95340 614 aaPredicted RBP12.41□□□□□ -0.42
SHMT2-209ENST00000553949 POP4O95707 220 aaKnown RBP12.41□□□□□ -0.42
SHMT2-209ENST00000553949 CR2P20023 1033 aa12.41□□□□□ -0.42
SHMT2-209ENST00000553949 AVPR2P30518 371 aa12.41□□□□□ -0.42
SHMT2-209ENST00000553949 STIP1P31948 543 aaKnown RBP12.41□□□□□ -0.42
SHMT2-209ENST00000553949 CHRNA3P32297 505 aa12.41□□□□□ -0.42
SHMT2-209ENST00000553949 SCNN1BP51168 640 aa12.41□□□□□ -0.42
SHMT2-209ENST00000553949 COPAP53621 1224 aa12.41□□□□□ -0.42
SHMT2-209ENST00000553949 NRLP54845 237 aa12.41□□□□□ -0.42
SHMT2-209ENST00000553949 GDF10P55107 478 aa12.41□□□□□ -0.42
SHMT2-209ENST00000553949 ITKQ08881 620 aa12.41□□□□□ -0.42
SHMT2-209ENST00000553949 DSG4Q86SJ6 1040 aa12.41□□□□□ -0.42
SHMT2-209ENST00000553949 SRLQ86TD4 932 aa12.41□□□□□ -0.42
SHMT2-209ENST00000553949 ZNF567Q8N184 647 aa12.41□□□□□ -0.42
SHMT2-209ENST00000553949 DTWD2Q8NBA8 298 aa12.41□□□□□ -0.42
SHMT2-209ENST00000553949 TSTD1Q8NFU3 115 aa12.41□□□□□ -0.42
SHMT2-209ENST00000553949 HHIPQ96QV1 700 aa12.41□□□□□ -0.42
SHMT2-209ENST00000553949 NUDCD1Q96RS6 583 aa12.41□□□□□ -0.42
SHMT2-209ENST00000553949 FAM129BQ96TA1 746 aa12.41□□□□□ -0.42
SHMT2-209ENST00000553949 HEPHQ9BQS7 1158 aa12.41□□□□□ -0.42
SHMT2-209ENST00000553949 MKRN2Q9H000 416 aaKnown RBP12.41□□□□□ -0.42
SHMT2-209ENST00000553949 RSPH9Q9H1X1 276 aaPredicted RBP12.41□□□□□ -0.42
SHMT2-209ENST00000553949 FBRSQ9HAH7 460 aa12.41□□□□□ -0.42
SHMT2-209ENST00000553949 KLHL8Q9P2G9 620 aaPredicted RBP12.41□□□□□ -0.42
SHMT2-209ENST00000553949 IL36AQ9UHA7 158 aa12.41□□□□□ -0.42
SHMT2-209ENST00000553949 EVLQ9UI08 416 aaPredicted RBP12.41□□□□□ -0.42
SHMT2-209ENST00000553949 TRHDEQ9UKU6 1024 aa12.41□□□□□ -0.42
SHMT2-209ENST00000553949 PPM1HQ9ULR3 514 aa12.41□□□□□ -0.42
SHMT2-209ENST00000553949 TTC24A2A3L6 582 aaPredicted RBP12.4□□□□□ -0.42
SHMT2-209ENST00000553949 C5orf60A6NFR6 353 aa12.4□□□□□ -0.42
SHMT2-209ENST00000553949 RNASEH1O60930 286 aaKnown RBP12.4□□□□□ -0.42
SHMT2-209ENST00000553949 GCATO75600 419 aa12.4□□□□□ -0.42
SHMT2-209ENST00000553949 ALDH1A2O94788 518 aa12.4□□□□□ -0.42
SHMT2-209ENST00000553949 APBB3O95704 486 aa12.4□□□□□ -0.42
SHMT2-209ENST00000553949 PRNPP04156 253 aa12.4□□□□□ -0.42
SHMT2-209ENST00000553949 CTSLP07711 333 aa12.4□□□□□ -0.42
SHMT2-209ENST00000553949 NDUFV2P19404 249 aa12.4□□□□□ -0.42
SHMT2-209ENST00000553949 CES1P23141 567 aa12.4□□□□□ -0.42
SHMT2-209ENST00000553949 GKP32189 559 aa12.4□□□□□ -0.42
SHMT2-209ENST00000553949 CD68P34810 354 aaPredicted RBP12.4□□□□□ -0.42
SHMT2-209ENST00000553949 COILP38432 576 aaPredicted RBP12.4□□□□□ -0.42
SHMT2-209ENST00000553949 MAPK8P45983 427 aa12.4□□□□□ -0.42
SHMT2-209ENST00000553949 KCNJ1P48048 391 aa12.4□□□□□ -0.42
SHMT2-209ENST00000553949 AP1S1P61966 158 aa12.4□□□□□ -0.42
SHMT2-209ENST00000553949 RPS14P62263 151 aaKnown RBP12.4□□□□□ -0.42
SHMT2-209ENST00000553949 DSC2Q02487 901 aa12.4□□□□□ -0.42
SHMT2-209ENST00000553949 RAD51Q06609 339 aa12.4□□□□□ -0.42
SHMT2-209ENST00000553949 TUBB2AQ13885 445 aa12.4□□□□□ -0.42
SHMT2-209ENST00000553949 WHAMMP3Q1A5X7 153 aa12.4□□□□□ -0.42
SHMT2-209ENST00000553949 ARSIQ5FYB1 569 aa12.4□□□□□ -0.42
SHMT2-209ENST00000553949 RALGPS1Q5JS13 557 aa12.4□□□□□ -0.42
SHMT2-209ENST00000553949 TMEM31Q5JXX7 168 aa12.4□□□□□ -0.42
SHMT2-209ENST00000553949 ANKRD20A2Q5SQ80 823 aa12.4□□□□□ -0.42
SHMT2-209ENST00000553949 ANKRD20A1Q5TYW2 823 aa12.4□□□□□ -0.42
SHMT2-209ENST00000553949 ANKRD20A3Q5VUR7 823 aa12.4□□□□□ -0.42
SHMT2-209ENST00000553949 ALG1LQ6GMV1 187 aa12.4□□□□□ -0.42
SHMT2-209ENST00000553949 TTC27Q6P3X3 843 aa12.4□□□□□ -0.42
SHMT2-209ENST00000553949 NCEH1Q6PIU2 408 aa12.4□□□□□ -0.42
SHMT2-209ENST00000553949 PID1Q7Z2X4 250 aa12.4□□□□□ -0.42
SHMT2-209ENST00000553949 TMPRSS6Q8IU80 811 aa12.4□□□□□ -0.42
SHMT2-209ENST00000553949 MMAAQ8IVH4 418 aaKnown RBP12.4□□□□□ -0.42
SHMT2-209ENST00000553949 C1orf210Q8IVY1 113 aa12.4□□□□□ -0.42
SHMT2-209ENST00000553949 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.4□□□□□ -0.42
SHMT2-209ENST00000553949 ARRDC2Q8TBH0 407 aa12.4□□□□□ -0.42
SHMT2-209ENST00000553949 CCDC110Q8TBZ0 833 aa12.4□□□□□ -0.42
SHMT2-209ENST00000553949 GRIN3AQ8TCU5 1115 aa12.4□□□□□ -0.42
SHMT2-209ENST00000553949 VOPP1Q96AW1 172 aa12.4□□□□□ -0.42
SHMT2-209ENST00000553949 RTP4Q96DX8 246 aa12.4□□□□□ -0.42
SHMT2-209ENST00000553949 LRIG1Q96JA1 1093 aa12.4□□□□□ -0.42
SHMT2-209ENST00000553949 MRGPRX1Q96LB2 322 aa12.4□□□□□ -0.42
SHMT2-209ENST00000553949 SPATA13Q96N96 652 aa12.4□□□□□ -0.42
SHMT2-209ENST00000553949 SEMA3CQ99985 751 aa12.4□□□□□ -0.42
SHMT2-209ENST00000553949 TUBB2BQ9BVA1 445 aa12.4□□□□□ -0.42
SHMT2-209ENST00000553949 C1QTNF1Q9BXJ1 281 aa12.4□□□□□ -0.42
SHMT2-209ENST00000553949 SLC6A17Q9H1V8 727 aa12.4□□□□□ -0.42
SHMT2-209ENST00000553949 ZDHHC6Q9H6R6 413 aa12.4□□□□□ -0.42
SHMT2-209ENST00000553949 NOD2Q9HC29 1040 aa12.4□□□□□ -0.42
SHMT2-209ENST00000553949 GLOD4Q9HC38 313 aa12.4□□□□□ -0.42
SHMT2-209ENST00000553949 SCUBE2Q9NQ36 999 aa12.4□□□□□ -0.42
SHMT2-209ENST00000553949 PRMT8Q9NR22 394 aaPredicted RBP12.4□□□□□ -0.42
SHMT2-209ENST00000553949 MRFAP1Q9Y605 127 aa12.4□□□□□ -0.42
SHMT2-209ENST00000553949 WASF2Q9Y6W5 498 aa12.4□□□□□ -0.42
SHMT2-209ENST00000553949 C1QTNF3-AMACRE9PGA6 284 aa12.39□□□□□ -0.43
SHMT2-209ENST00000553949 K7ESF4 209 aa12.39□□□□□ -0.43
SHMT2-209ENST00000553949 OPHN1O60890 802 aa12.39□□□□□ -0.43
SHMT2-209ENST00000553949 LEFTY1O75610 366 aa12.39□□□□□ -0.43
SHMT2-209ENST00000553949 IFNB1P01574 187 aa12.39□□□□□ -0.43
SHMT2-209ENST00000553949 IL1BP01584 269 aa12.39□□□□□ -0.43
SHMT2-209ENST00000553949 C7P10643 843 aa12.39□□□□□ -0.43
SHMT2-209ENST00000553949 GABRG2P18507 467 aa12.39□□□□□ -0.43
SHMT2-209ENST00000553949 PSMD8P48556 350 aa12.39□□□□□ -0.43
SHMT2-209ENST00000553949 FNTAP49354 379 aa12.39□□□□□ -0.43
SHMT2-209ENST00000553949 CKAP4Q07065 602 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms