RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 TMEM199Q8N511 208 aa12.93□□□□□ -0.34
CHD4-211ENST00000544484 TOP6BLQ8N6T0 577 aa12.93□□□□□ -0.34
CHD4-211ENST00000544484 CXorf40AQ8TE69 158 aa12.93□□□□□ -0.34
CHD4-211ENST00000544484 OSCP1Q8WVF1 389 aa12.93□□□□□ -0.34
CHD4-211ENST00000544484 COL26A1Q96A83 441 aa12.93□□□□□ -0.34
CHD4-211ENST00000544484 KCND1Q9NSA2 647 aa12.93□□□□□ -0.34
CHD4-211ENST00000544484 R3HDM2Q9Y2K5 976 aaKnown RBP12.93□□□□□ -0.34
CHD4-211ENST00000544484 TCRBV9S1A1TA0A576 114 aa12.93□□□□□ -0.34
CHD4-211ENST00000544484 ANKDD1BA6NHY2 528 aa12.93□□□□□ -0.34
CHD4-211ENST00000544484 HNRNPLP14866 589 aaKnown RBP eCLIP12.93□□□□□ -0.34
CHD4-211ENST00000544484 HOXB8P17481 243 aaPredicted RBP12.93□□□□□ -0.34
CHD4-211ENST00000544484 CACNA2D1P54289 1103 aa12.93□□□□□ -0.34
CHD4-211ENST00000544484 CYP2A13Q16696 494 aa12.93□□□□□ -0.34
CHD4-211ENST00000544484 EXOC3L1Q86VI1 746 aa12.93□□□□□ -0.34
CHD4-211ENST00000544484 NKAPQ8N5F7 415 aaKnown RBP12.93□□□□□ -0.34
CHD4-211ENST00000544484 EIF1ADQ8N9N8 165 aaKnown RBP12.93□□□□□ -0.34
CHD4-211ENST00000544484 PRDM16Q9HAZ2 1276 aa12.93□□□□□ -0.34
CHD4-211ENST00000544484 MMP8P22894 467 aa12.92□□□□□ -0.34
CHD4-211ENST00000544484 PBX1P40424 430 aa12.92□□□□□ -0.34
CHD4-211ENST00000544484 NOGQ13253 232 aa12.92□□□□□ -0.34
CHD4-211ENST00000544484 TRIM16LQ309B1 348 aa12.92□□□□□ -0.34
CHD4-211ENST00000544484 SAMD4BQ5PRF9 694 aaKnown RBP12.92□□□□□ -0.34
CHD4-211ENST00000544484 CDYL2Q8N8U2 506 aa12.92□□□□□ -0.34
CHD4-211ENST00000544484 ACE2Q9BYF1 805 aaPredicted RBP12.92□□□□□ -0.34
CHD4-211ENST00000544484 ABCG8Q9H221 673 aa12.92□□□□□ -0.34
CHD4-211ENST00000544484 FBXL21Q9UKT6 434 aa12.92□□□□□ -0.34
CHD4-211ENST00000544484 CLTBP09497 229 aa12.92□□□□□ -0.34
CHD4-211ENST00000544484 ATP5F1P24539 256 aaPredicted RBP12.92□□□□□ -0.34
CHD4-211ENST00000544484 GPR1P46091 355 aa12.92□□□□□ -0.34
CHD4-211ENST00000544484 MAPK10P53779 464 aa12.92□□□□□ -0.34
CHD4-211ENST00000544484 TUSC3Q13454 348 aa12.92□□□□□ -0.34
CHD4-211ENST00000544484 NEDD8Q15843 81 aa12.92□□□□□ -0.34
CHD4-211ENST00000544484 CERCAMQ5T4B2 595 aa12.92□□□□□ -0.34
CHD4-211ENST00000544484 LRRC74BQ6ZQY2 392 aa12.92□□□□□ -0.34
CHD4-211ENST00000544484 BHLHE22Q8NFJ8 381 aaPredicted RBP12.92□□□□□ -0.34
CHD4-211ENST00000544484 SPACA7Q96KW9 195 aa12.92□□□□□ -0.34
CHD4-211ENST00000544484 ZMAT2Q96NC0 199 aaKnown RBP12.92□□□□□ -0.34
CHD4-211ENST00000544484 ZNHIT2Q9UHR6 403 aa12.92□□□□□ -0.34
CHD4-211ENST00000544484 FBXO5Q9UKT4 447 aa12.92□□□□□ -0.34
CHD4-211ENST00000544484 STARD13Q9Y3M8 1113 aa12.92□□□□□ -0.34
CHD4-211ENST00000544484 SMIM35A0A1B0GVV1 85 aa12.92□□□□□ -0.34
CHD4-211ENST00000544484 A0A1W2PQH9 124 aa12.92□□□□□ -0.34
CHD4-211ENST00000544484 RPN2P04844 631 aa12.92□□□□□ -0.34
CHD4-211ENST00000544484 GUCA1AP43080 201 aaPredicted RBP12.92□□□□□ -0.34
CHD4-211ENST00000544484 CLCN5P51795 746 aa12.92□□□□□ -0.34
CHD4-211ENST00000544484 NRF1Q16656 503 aa12.92□□□□□ -0.34
CHD4-211ENST00000544484 C12orf56Q8IXR9 622 aa12.92□□□□□ -0.34
CHD4-211ENST00000544484 MAB21L3Q8N8X9 362 aa12.92□□□□□ -0.34
CHD4-211ENST00000544484 MBOAT7Q96N66 472 aa12.92□□□□□ -0.34
CHD4-211ENST00000544484 ASB2Q96Q27 587 aa12.92□□□□□ -0.34
CHD4-211ENST00000544484 SIKE1Q9BRV8 207 aa12.92□□□□□ -0.34
CHD4-211ENST00000544484 ADAM28Q9UKQ2 775 aa12.92□□□□□ -0.34
CHD4-211ENST00000544484 AGO1Q9UL18 857 aaKnown RBP12.92□□□□□ -0.34
CHD4-211ENST00000544484 TNPO3Q9Y5L0 923 aaKnown RBP12.92□□□□□ -0.34
CHD4-211ENST00000544484 ROBO3Q96MS0 1386 aa12.92□□□□□ -0.34
CHD4-211ENST00000544484 KIF1CO43896 1103 aaKnown RBP12.92□□□□□ -0.34
CHD4-211ENST00000544484 B4GALT4O60513 344 aa12.92□□□□□ -0.34
CHD4-211ENST00000544484 GABRR2P28476 465 aa12.92□□□□□ -0.34
CHD4-211ENST00000544484 WNT3AP56704 352 aa12.92□□□□□ -0.34
CHD4-211ENST00000544484 RAB10P61026 200 aa12.92□□□□□ -0.34
CHD4-211ENST00000544484 CYP20A1Q6UW02 462 aa12.92□□□□□ -0.34
CHD4-211ENST00000544484 REPS1Q96D71 796 aa12.92□□□□□ -0.34
CHD4-211ENST00000544484 XPR1Q9UBH6 696 aa12.92□□□□□ -0.34
CHD4-211ENST00000544484 VPS4BO75351 444 aa12.92□□□□□ -0.34
CHD4-211ENST00000544484 NUDT14O95848 222 aa12.92□□□□□ -0.34
CHD4-211ENST00000544484 TNFRSF8P28908 595 aa12.92□□□□□ -0.34
CHD4-211ENST00000544484 SLC25A52Q3SY17 297 aa12.92□□□□□ -0.34
CHD4-211ENST00000544484 KIAA1324Q6UXG2 1013 aaKnown RBP12.92□□□□□ -0.34
CHD4-211ENST00000544484 RGL4Q8IZJ4 473 aa12.92□□□□□ -0.34
CHD4-211ENST00000544484 DNAJB14Q8TBM8 379 aa12.92□□□□□ -0.34
CHD4-211ENST00000544484 GNPTGQ9UJJ9 305 aa12.92□□□□□ -0.34
CHD4-211ENST00000544484 KLRG2A4D1S0 409 aaPredicted RBP12.91□□□□□ -0.34
CHD4-211ENST00000544484 LYPLA1O75608 230 aaPredicted RBP12.91□□□□□ -0.34
CHD4-211ENST00000544484 FEN1P39748 380 aaKnown RBP12.91□□□□□ -0.34
CHD4-211ENST00000544484 PIK3CGP48736 1102 aa12.91□□□□□ -0.34
CHD4-211ENST00000544484 TAF10Q12962 218 aa12.91□□□□□ -0.34
CHD4-211ENST00000544484 ABRQ12979 859 aa12.91□□□□□ -0.34
CHD4-211ENST00000544484 ACSS3Q9H6R3 686 aa12.91□□□□□ -0.34
CHD4-211ENST00000544484 SAR1AQ9NR31 198 aa12.91□□□□□ -0.34
CHD4-211ENST00000544484 SLC12A4Q9UP95 1085 aa12.91□□□□□ -0.34
CHD4-211ENST00000544484 ZNF839A8K0R7 811 aa12.91□□□□□ -0.34
CHD4-211ENST00000544484 GPR25O00155 361 aa12.91□□□□□ -0.34
CHD4-211ENST00000544484 FKTNO75072 461 aa12.91□□□□□ -0.34
CHD4-211ENST00000544484 C4BPAP04003 597 aaKnown RBP12.91□□□□□ -0.34
CHD4-211ENST00000544484 EIF2S1P05198 315 aaKnown RBP12.91□□□□□ -0.34
CHD4-211ENST00000544484 CTSEP14091 401 aa12.91□□□□□ -0.34
CHD4-211ENST00000544484 TTPAP49638 278 aa12.91□□□□□ -0.34
CHD4-211ENST00000544484 CDK18Q07002 472 aa12.91□□□□□ -0.34
CHD4-211ENST00000544484 FAM110CQ1W6H9 321 aa12.91□□□□□ -0.34
CHD4-211ENST00000544484 USP39Q53GS9 565 aaKnown RBP12.91□□□□□ -0.34
CHD4-211ENST00000544484 ZNF697Q5TEC3 545 aa12.91□□□□□ -0.34
CHD4-211ENST00000544484 PLEKHA7Q6IQ23 1121 aa12.91□□□□□ -0.34
CHD4-211ENST00000544484 CES5AQ6NT32 575 aa12.91□□□□□ -0.34
CHD4-211ENST00000544484 AFTPHQ6ULP2 937 aa12.91□□□□□ -0.34
CHD4-211ENST00000544484 CDK20Q8IZL9 346 aa12.91□□□□□ -0.34
CHD4-211ENST00000544484 NLGN2Q8NFZ4 835 aa12.91□□□□□ -0.34
CHD4-211ENST00000544484 PPP1R16AQ96I34 528 aa12.91□□□□□ -0.34
CHD4-211ENST00000544484 ADPRHL2Q9NX46 363 aa12.91□□□□□ -0.34
CHD4-211ENST00000544484 TCRBV7S2A1N4TA0A589 114 aa12.91□□□□□ -0.34
CHD4-211ENST00000544484 NOL4O94818 638 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms