RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 INVSQ9Y283 1065 aa19.57■□□□□ 0.72
SUDS3-204ENST00000543473 TBKBP1A7MCY6 615 aa19.57■□□□□ 0.72
SUDS3-204ENST00000543473 LRCH4O75427 683 aa19.57■□□□□ 0.72
SUDS3-204ENST00000543473 TSPAN8P19075 237 aa19.57■□□□□ 0.72
SUDS3-204ENST00000543473 HARS2P49590 506 aaKnown RBP19.57■□□□□ 0.72
SUDS3-204ENST00000543473 PEX6Q13608 980 aa19.57■□□□□ 0.72
SUDS3-204ENST00000543473 TRIM74Q86UV6 250 aa19.57■□□□□ 0.72
SUDS3-204ENST00000543473 TRIM73Q86UV7 250 aa19.57■□□□□ 0.72
SUDS3-204ENST00000543473 IL31RAQ8NI17 732 aa19.57■□□□□ 0.72
SUDS3-204ENST00000543473 UBASH3BQ8TF42 649 aa19.57■□□□□ 0.72
SUDS3-204ENST00000543473 SYT15Q9BQS2 421 aa19.57■□□□□ 0.72
SUDS3-204ENST00000543473 HGH1Q9BTY7 390 aa19.57■□□□□ 0.72
SUDS3-204ENST00000543473 DNAJB4Q9UDY4 337 aa19.57■□□□□ 0.72
SUDS3-204ENST00000543473 DYTNA2CJ06 578 aa19.56■□□□□ 0.72
SUDS3-204ENST00000543473 KRT6AP02538 564 aa19.56■□□□□ 0.72
SUDS3-204ENST00000543473 KRT6BP04259 564 aa19.56■□□□□ 0.72
SUDS3-204ENST00000543473 KRT6CP48668 564 aa19.56■□□□□ 0.72
SUDS3-204ENST00000543473 FSTL1Q12841 308 aa19.56■□□□□ 0.72
SUDS3-204ENST00000543473 NECAB2Q7Z6G3 386 aa19.56■□□□□ 0.72
SUDS3-204ENST00000543473 SLC44A2Q8IWA5 706 aaPredicted RBP19.56■□□□□ 0.72
SUDS3-204ENST00000543473 PGAM4Q8N0Y7 254 aa19.56■□□□□ 0.72
SUDS3-204ENST00000543473 LEF1Q9UJU2 399 aaPredicted RBP19.56■□□□□ 0.72
SUDS3-204ENST00000543473 NRP2O60462 931 aa19.56■□□□□ 0.72
SUDS3-204ENST00000543473 ARIH2O95376 493 aa19.56■□□□□ 0.72
SUDS3-204ENST00000543473 SNHG28P0DPA3 235 aa19.56■□□□□ 0.72
SUDS3-204ENST00000543473 HOXB8P17481 243 aaPredicted RBP19.56■□□□□ 0.72
SUDS3-204ENST00000543473 TFEBP19484 476 aa19.56■□□□□ 0.72
SUDS3-204ENST00000543473 TNFSF9P41273 254 aa19.56■□□□□ 0.72
SUDS3-204ENST00000543473 SPATA6LQ8N4H0 392 aa19.56■□□□□ 0.72
SUDS3-204ENST00000543473 LZTR1Q8N653 840 aa19.56■□□□□ 0.72
SUDS3-204ENST00000543473 PTGR2Q8N8N7 351 aaPredicted RBP19.56■□□□□ 0.72
SUDS3-204ENST00000543473 B3GALNT2Q8NCR0 500 aa19.56■□□□□ 0.72
SUDS3-204ENST00000543473 OSBPL6Q9BZF3 934 aa19.56■□□□□ 0.72
SUDS3-204ENST00000543473 ABCC6O95255 1503 aa19.56■□□□□ 0.72
SUDS3-204ENST00000543473 SNTNA6NMZ2 147 aa19.56■□□□□ 0.72
SUDS3-204ENST00000543473 CD3EAPO15446 510 aaKnown RBP19.56■□□□□ 0.72
SUDS3-204ENST00000543473 RECQL5O94762 991 aaPredicted RBP19.56■□□□□ 0.72
SUDS3-204ENST00000543473 HGFP14210 728 aa19.56■□□□□ 0.72
SUDS3-204ENST00000543473 GOT1P17174 413 aa19.56■□□□□ 0.72
SUDS3-204ENST00000543473 NFKB1P19838 968 aa19.56■□□□□ 0.72
SUDS3-204ENST00000543473 UBA1P22314 1058 aaKnown RBP19.56■□□□□ 0.72
SUDS3-204ENST00000543473 SAPCD2Q86UD0 394 aa19.56■□□□□ 0.72
SUDS3-204ENST00000543473 NMRK2Q9NPI5 230 aa19.56■□□□□ 0.72
SUDS3-204ENST00000543473 NKRFO15226 690 aaKnown RBP eCLIP19.56■□□□□ 0.72
SUDS3-204ENST00000543473 CCNT2O60583 730 aaKnown RBP19.56■□□□□ 0.72
SUDS3-204ENST00000543473 SERPIND1P05546 499 aa19.56■□□□□ 0.72
SUDS3-204ENST00000543473 ANXA6P08133 673 aa19.56■□□□□ 0.72
SUDS3-204ENST00000543473 TMEM132BQ14DG7 1078 aa19.56■□□□□ 0.72
SUDS3-204ENST00000543473 GK5Q6ZS86 529 aa19.56■□□□□ 0.72
SUDS3-204ENST00000543473 WNT8BQ93098 351 aa19.56■□□□□ 0.72
SUDS3-204ENST00000543473 TMEM106CQ9BVX2 250 aa19.56■□□□□ 0.72
SUDS3-204ENST00000543473 PCDH18Q9HCL0 1135 aa19.56■□□□□ 0.72
SUDS3-204ENST00000543473 BTN3A1O00481 513 aa19.55■□□□□ 0.72
SUDS3-204ENST00000543473 TSPAN3O60637 253 aa19.55■□□□□ 0.72
SUDS3-204ENST00000543473 SERPINF2P08697 491 aa19.55■□□□□ 0.72
SUDS3-204ENST00000543473 NOS2P35228 1153 aa19.55■□□□□ 0.72
SUDS3-204ENST00000543473 PSEN1P49768 467 aa19.55■□□□□ 0.72
SUDS3-204ENST00000543473 SERPINH1P50454 418 aaKnown RBP19.55■□□□□ 0.72
SUDS3-204ENST00000543473 ILF2Q12905 390 aaKnown RBP19.55■□□□□ 0.72
SUDS3-204ENST00000543473 GRIK4Q16099 956 aa19.55■□□□□ 0.72
SUDS3-204ENST00000543473 ENKURQ8TC29 256 aa19.55■□□□□ 0.72
SUDS3-204ENST00000543473 FARP1Q9Y4F1 1045 aaPredicted RBP19.55■□□□□ 0.72
SUDS3-204ENST00000543473 CNTNAP2Q9UHC6 1331 aa19.55■□□□□ 0.72
SUDS3-204ENST00000543473 SEC22BO75396 215 aa19.55■□□□□ 0.72
SUDS3-204ENST00000543473 MZF1P28698 734 aaPredicted RBP19.55■□□□□ 0.72
SUDS3-204ENST00000543473 ADCYAP1R1P41586 468 aa19.55■□□□□ 0.72
SUDS3-204ENST00000543473 LHX1P48742 406 aa19.55■□□□□ 0.72
SUDS3-204ENST00000543473 DRICH1Q6PGQ1 229 aaPredicted RBP19.55■□□□□ 0.72
SUDS3-204ENST00000543473 AMIGO3Q86WK7 504 aa19.55■□□□□ 0.72
SUDS3-204ENST00000543473 SLCO2A1Q92959 643 aa19.55■□□□□ 0.72
SUDS3-204ENST00000543473 POPDC2Q9HBU9 364 aa19.55■□□□□ 0.72
SUDS3-204ENST00000543473 DMAC2Q9NW81 257 aa19.55■□□□□ 0.72
SUDS3-204ENST00000543473 PCNAP12004 261 aa19.55■□□□□ 0.72
SUDS3-204ENST00000543473 RAB27AP51159 221 aa19.55■□□□□ 0.72
SUDS3-204ENST00000543473 BLVRAP53004 296 aa19.55■□□□□ 0.72
SUDS3-204ENST00000543473 RALGDSQ12967 914 aa19.55■□□□□ 0.72
SUDS3-204ENST00000543473 ARHGEF7Q14155 803 aa19.55■□□□□ 0.72
SUDS3-204ENST00000543473 TRIQKQ629K1 86 aa19.55■□□□□ 0.72
SUDS3-204ENST00000543473 ARHGAP36Q6ZRI8 547 aa19.55■□□□□ 0.72
SUDS3-204ENST00000543473 LPGAT1Q92604 370 aa19.55■□□□□ 0.72
SUDS3-204ENST00000543473 HPS1Q92902 700 aa19.55■□□□□ 0.72
SUDS3-204ENST00000543473 KLRG1Q96E93 195 aa19.55■□□□□ 0.72
SUDS3-204ENST00000543473 DDX43Q9NXZ2 648 aaKnown RBP19.55■□□□□ 0.72
SUDS3-204ENST00000543473 GUCA1CO95843 209 aa19.54■□□□□ 0.72
SUDS3-204ENST00000543473 CCR3P51677 355 aa19.54■□□□□ 0.72
SUDS3-204ENST00000543473 ZNF384Q8TF68 577 aa19.54■□□□□ 0.72
SUDS3-204ENST00000543473 ZHX1-C8orf76Q96EF9 292 aa19.54■□□□□ 0.72
SUDS3-204ENST00000543473 FETUBQ9UGM5 382 aa19.54■□□□□ 0.72
SUDS3-204ENST00000543473 CIDEBQ9UHD4 219 aa19.54■□□□□ 0.72
SUDS3-204ENST00000543473 MATN2O00339 956 aa19.54■□□□□ 0.72
SUDS3-204ENST00000543473 PLIN3O60664 434 aa19.54■□□□□ 0.72
SUDS3-204ENST00000543473 IMPDH2P12268 514 aa19.54■□□□□ 0.72
SUDS3-204ENST00000543473 TFAP2DQ7Z6R9 452 aa19.54■□□□□ 0.72
SUDS3-204ENST00000543473 SEPT8Q92599 483 aa19.54■□□□□ 0.72
SUDS3-204ENST00000543473 CHID1Q9BWS9 393 aa19.54■□□□□ 0.72
SUDS3-204ENST00000543473 EPB41L1Q9H4G0 881 aa19.54■□□□□ 0.72
SUDS3-204ENST00000543473 VPS45Q9NRW7 570 aa19.54■□□□□ 0.72
SUDS3-204ENST00000543473 TUBA8Q9NY65 449 aaPredicted RBP19.54■□□□□ 0.72
SUDS3-204ENST00000543473 EFCAB10A6NFE3 127 aa19.54■□□□□ 0.72
SUDS3-204ENST00000543473 GPR182O15218 404 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms