RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 TSPAN14Q8NG11 270 aa10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 MRPS26Q9BYN8 205 aaKnown RBP10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 ULBP1Q9BZM6 244 aa10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 SIK2Q9H0K1 926 aa10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 SNX25Q9H3E2 840 aa10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 PRDM16Q9HAZ2 1276 aa10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 PIM2Q9P1W9 311 aa10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 NUDT5Q9UKK9 219 aa10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 DFFAO00273 331 aa10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 SOCS2O14508 198 aa10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 GAS2O43903 313 aaKnown RBP10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 TRMUO75648 421 aaKnown RBP10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 CYP2B6P20813 491 aa10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 TAS2R39P59534 338 aa10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 TPI1P60174 286 aa10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 ARHGAP1Q07960 439 aa10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 SEPT6Q14141 434 aa10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 TRIM67Q6ZTA4 783 aa10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 PAQR9Q6ZVX9 377 aa10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 CATSPER4Q7RTX7 472 aa10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 LCA5Q86VQ0 697 aa10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 HERC6Q8IVU3 1022 aa10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 ELMO2Q96JJ3 720 aa10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 ZFP42Q96MM3 310 aa10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 MED10Q9BTT4 135 aa10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 CCDC28BQ9BUN5 200 aa10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 DDIT4Q9NX09 232 aa10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 RBPJLQ9UBG7 517 aa10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 KIAA1257Q9ULG3 409 aa10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 LRRC14BA6NHZ5 514 aa10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 PMPCBO75439 489 aa10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 CYP2C8P10632 490 aa10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 CES1P23141 567 aa10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 TKTL1P51854 596 aa10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 IKBKEQ14164 716 aa10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 PCSK7Q16549 785 aa10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 FBXO47Q5MNV8 452 aa10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 MARCH8Q5T0T0 291 aa10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 CHERPQ8IWX8 916 aaKnown RBP10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 AHI1Q8N157 1196 aa10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 FAM47BQ8NA70 645 aa10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 HEXDCQ8WVB3 486 aa10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 Q9H521 79 aa10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 EFCAB1Q9HAE3 211 aa10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 CASS4Q9NQ75 786 aa10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 IGSF9Q9P2J2 1179 aa10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 RAB26Q9ULW5 256 aa10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 PRPF19Q9UMS4 504 aaKnown RBP10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 AURKCQ9UQB9 309 aa10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 AP4S1Q9Y587 144 aa10.49□□□□□ -0.73
CDC42SE1-207ENST00000540998 MYLKQ15746 1914 aa10.48□□□□□ -0.73
CDC42SE1-207ENST00000540998 ARHGAP10A1A4S6 786 aa10.48□□□□□ -0.73
CDC42SE1-207ENST00000540998 HACD1B0YJ81 288 aa10.48□□□□□ -0.73
CDC42SE1-207ENST00000540998 TMEM114B3SHH9 223 aa10.48□□□□□ -0.73
CDC42SE1-207ENST00000540998 ARNTP27540 789 aa10.48□□□□□ -0.73
CDC42SE1-207ENST00000540998 PRDX6P30041 224 aa10.48□□□□□ -0.73
CDC42SE1-207ENST00000540998 YAP1P46937 504 aaKnown RBP10.48□□□□□ -0.73
CDC42SE1-207ENST00000540998 PPIDQ08752 370 aaKnown RBP10.48□□□□□ -0.73
CDC42SE1-207ENST00000540998 KCTD2Q14681 263 aa10.48□□□□□ -0.73
CDC42SE1-207ENST00000540998 ANO4Q32M45 955 aa10.48□□□□□ -0.73
CDC42SE1-207ENST00000540998 SH3D19Q5HYK7 790 aa10.48□□□□□ -0.73
CDC42SE1-207ENST00000540998 RWDD4Q6NW29 188 aaKnown RBP10.48□□□□□ -0.73
CDC42SE1-207ENST00000540998 C4orf22Q6V702 233 aa10.48□□□□□ -0.73
CDC42SE1-207ENST00000540998 LPCAT2Q7L5N7 544 aa10.48□□□□□ -0.73
CDC42SE1-207ENST00000540998 OFCC1Q8IZS5 231 aa10.48□□□□□ -0.73
CDC42SE1-207ENST00000540998 TMEM40Q8WWA1 233 aa10.48□□□□□ -0.73
CDC42SE1-207ENST00000540998 SNX27Q96L92 541 aa10.48□□□□□ -0.73
CDC42SE1-207ENST00000540998 SLC2A11Q9BYW1 496 aa10.48□□□□□ -0.73
CDC42SE1-207ENST00000540998 ZNF696Q9H7X3 374 aa10.48□□□□□ -0.73
CDC42SE1-207ENST00000540998 EIF2B3Q9NR50 452 aaKnown RBP10.48□□□□□ -0.73
CDC42SE1-207ENST00000540998 CDC14AQ9UNH5 594 aa10.48□□□□□ -0.73
CDC42SE1-207ENST00000540998 DMTF1Q9Y222 760 aa10.48□□□□□ -0.73
CDC42SE1-207ENST00000540998 SBF1O95248 1867 aa10.48□□□□□ -0.73
CDC42SE1-207ENST00000540998 FAM95CA0A1B0GW59 222 aa10.48□□□□□ -0.73
CDC42SE1-207ENST00000540998 BOLA2-SMG1P6H3BVE0 249 aa10.48□□□□□ -0.73
CDC42SE1-207ENST00000540998 MPOP05164 745 aa10.48□□□□□ -0.73
CDC42SE1-207ENST00000540998 ADRA1BP35368 520 aa10.48□□□□□ -0.73
CDC42SE1-207ENST00000540998 SLC1A2P43004 574 aa10.48□□□□□ -0.73
CDC42SE1-207ENST00000540998 ENTPD1P49961 510 aa10.48□□□□□ -0.73
CDC42SE1-207ENST00000540998 PSMD7P51665 324 aa10.48□□□□□ -0.73
CDC42SE1-207ENST00000540998 ADARP55265 1226 aaKnown RBP10.48□□□□□ -0.73
CDC42SE1-207ENST00000540998 CDH13P55290 713 aa10.48□□□□□ -0.73
CDC42SE1-207ENST00000540998 PLOD1Q02809 727 aaPredicted RBP10.48□□□□□ -0.73
CDC42SE1-207ENST00000540998 SULT2A1Q06520 285 aa10.48□□□□□ -0.73
CDC42SE1-207ENST00000540998 CAPRIN1Q14444 709 aaKnown RBP10.48□□□□□ -0.73
CDC42SE1-207ENST00000540998 PLA2G4EQ3MJ16 856 aa10.48□□□□□ -0.73
CDC42SE1-207ENST00000540998 DALRD3Q5D0E6 543 aaKnown RBP10.48□□□□□ -0.73
CDC42SE1-207ENST00000540998 WSCD1Q658N2 575 aa10.48□□□□□ -0.73
CDC42SE1-207ENST00000540998 KCTD11Q693B1 232 aa10.48□□□□□ -0.73
CDC42SE1-207ENST00000540998 ZNF470Q6ECI4 717 aa10.48□□□□□ -0.73
CDC42SE1-207ENST00000540998 STRADAQ7RTN6 431 aa10.48□□□□□ -0.73
CDC42SE1-207ENST00000540998 NAT16Q8N8M0 369 aa10.48□□□□□ -0.73
CDC42SE1-207ENST00000540998 B3GALNT2Q8NCR0 500 aa10.48□□□□□ -0.73
CDC42SE1-207ENST00000540998 ARRDC4Q8NCT1 418 aa10.48□□□□□ -0.73
CDC42SE1-207ENST00000540998 STYXQ8WUJ0 223 aa10.48□□□□□ -0.73
CDC42SE1-207ENST00000540998 CANT1Q8WVQ1 401 aa10.48□□□□□ -0.73
CDC42SE1-207ENST00000540998 CNDP1Q96KN2 507 aa10.48□□□□□ -0.73
CDC42SE1-207ENST00000540998 GPR78Q96P69 363 aa10.48□□□□□ -0.73
CDC42SE1-207ENST00000540998 GPR22Q99680 433 aa10.48□□□□□ -0.73
CDC42SE1-207ENST00000540998 PIF1Q9H611 641 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms