RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 GRXCR1A8MXD5 290 aa17.34■□□□□ 0.37
PCDHB17P-201ENST00000539533 TM9SF1O15321 606 aa17.34■□□□□ 0.37
PCDHB17P-201ENST00000539533 AP2A1O95782 977 aa17.34■□□□□ 0.37
PCDHB17P-201ENST00000539533 LRG1P02750 347 aa17.34■□□□□ 0.37
PCDHB17P-201ENST00000539533 PDHA1P08559 390 aa17.34■□□□□ 0.37
PCDHB17P-201ENST00000539533 MBL2P11226 248 aaPredicted RBP17.34■□□□□ 0.37
PCDHB17P-201ENST00000539533 MLNP12872 115 aa17.34■□□□□ 0.37
PCDHB17P-201ENST00000539533 TSHRP16473 764 aa17.34■□□□□ 0.37
PCDHB17P-201ENST00000539533 GABRR2P28476 465 aa17.34■□□□□ 0.37
PCDHB17P-201ENST00000539533 ZXDBP98169 803 aa17.34■□□□□ 0.37
PCDHB17P-201ENST00000539533 ACBD5Q5T8D3 534 aaPredicted RBP17.34■□□□□ 0.37
PCDHB17P-201ENST00000539533 KCTD11Q693B1 232 aa17.34■□□□□ 0.37
PCDHB17P-201ENST00000539533 UNC5AQ6ZN44 842 aa17.34■□□□□ 0.37
PCDHB17P-201ENST00000539533 GAREM2Q75VX8 874 aa17.34■□□□□ 0.37
PCDHB17P-201ENST00000539533 PRPF39Q86UA1 669 aaKnown RBP17.34■□□□□ 0.37
PCDHB17P-201ENST00000539533 ARL14EPQ8N8R7 260 aaPredicted RBP17.34■□□□□ 0.37
PCDHB17P-201ENST00000539533 MRPL43Q8N983 215 aaKnown RBP17.34■□□□□ 0.37
PCDHB17P-201ENST00000539533 OR52K1Q8NGK4 314 aa17.34■□□□□ 0.37
PCDHB17P-201ENST00000539533 SPATA22Q8NHS9 363 aa17.34■□□□□ 0.37
PCDHB17P-201ENST00000539533 MZB1Q8WU39 189 aa17.34■□□□□ 0.37
PCDHB17P-201ENST00000539533 OXNAD1Q96HP4 312 aaPredicted RBP17.34■□□□□ 0.37
PCDHB17P-201ENST00000539533 RBM22Q9NW64 420 aaKnown RBP eCLIP17.34■□□□□ 0.37
PCDHB17P-201ENST00000539533 AGO1Q9UL18 857 aaKnown RBP17.34■□□□□ 0.37
PCDHB17P-201ENST00000539533 IRAK3Q9Y616 596 aa17.34■□□□□ 0.37
PCDHB17P-201ENST00000539533 ZFP37Q9Y6Q3 630 aaPredicted RBP17.34■□□□□ 0.37
PCDHB17P-201ENST00000539533 PEX11BO96011 259 aa17.33■□□□□ 0.37
PCDHB17P-201ENST00000539533 ACADSP16219 412 aa17.33■□□□□ 0.37
PCDHB17P-201ENST00000539533 MGAT1P26572 445 aa17.33■□□□□ 0.37
PCDHB17P-201ENST00000539533 RPS24P62847 133 aaKnown RBP17.33■□□□□ 0.37
PCDHB17P-201ENST00000539533 MTA1Q13330 715 aa17.33■□□□□ 0.37
PCDHB17P-201ENST00000539533 TSNAXIP1Q2TAA8 658 aa17.33■□□□□ 0.37
PCDHB17P-201ENST00000539533 KLHL38Q2WGJ6 581 aa17.33■□□□□ 0.37
PCDHB17P-201ENST00000539533 TIGD7Q6NT04 549 aaPredicted RBP17.33■□□□□ 0.37
PCDHB17P-201ENST00000539533 ZNF354CQ86Y25 554 aa17.33■□□□□ 0.37
PCDHB17P-201ENST00000539533 LRRC49Q8IUZ0 686 aa17.33■□□□□ 0.37
PCDHB17P-201ENST00000539533 BANPQ8N9N5 519 aa17.33■□□□□ 0.37
PCDHB17P-201ENST00000539533 SLC22A17Q8WUG5 538 aa17.33■□□□□ 0.37
PCDHB17P-201ENST00000539533 DNAJC9Q8WXX5 260 aa17.33■□□□□ 0.37
PCDHB17P-201ENST00000539533 ZFRQ96KR1 1074 aaKnown RBP17.33■□□□□ 0.37
PCDHB17P-201ENST00000539533 EMILIN2Q9BXX0 1053 aa17.33■□□□□ 0.37
PCDHB17P-201ENST00000539533 CADM1Q9BY67 442 aaKnown RBP17.33■□□□□ 0.37
PCDHB17P-201ENST00000539533 C12orf65Q9H3J6 166 aaKnown RBP17.33■□□□□ 0.37
PCDHB17P-201ENST00000539533 PAPOLBQ9NRJ5 636 aaKnown RBP17.33■□□□□ 0.37
PCDHB17P-201ENST00000539533 MYO7AQ13402 2215 aa17.33■□□□□ 0.37
PCDHB17P-201ENST00000539533 SDR42E2A6NKP2 422 aa17.33■□□□□ 0.36
PCDHB17P-201ENST00000539533 GOLGA8RI6L899 631 aa17.33■□□□□ 0.36
PCDHB17P-201ENST00000539533 NRG2O14511 850 aaPredicted RBP17.33■□□□□ 0.36
PCDHB17P-201ENST00000539533 CCDC22O60826 627 aa17.33■□□□□ 0.36
PCDHB17P-201ENST00000539533 RAMP2O60895 175 aa17.33■□□□□ 0.36
PCDHB17P-201ENST00000539533 HLA-DQB2P05538 268 aa17.33■□□□□ 0.36
PCDHB17P-201ENST00000539533 ACVRL1P37023 503 aa17.33■□□□□ 0.36
PCDHB17P-201ENST00000539533 SGSHP51688 502 aa17.33■□□□□ 0.36
PCDHB17P-201ENST00000539533 CYP4F8P98187 520 aa17.33■□□□□ 0.36
PCDHB17P-201ENST00000539533 POLD3Q15054 466 aaPredicted RBP17.33■□□□□ 0.36
PCDHB17P-201ENST00000539533 KBTBD12Q3ZCT8 623 aa17.33■□□□□ 0.36
PCDHB17P-201ENST00000539533 C5orf22Q49AR2 442 aa17.33■□□□□ 0.36
PCDHB17P-201ENST00000539533 KHDC1Q4VXA5 237 aaKnown RBP17.33■□□□□ 0.36
PCDHB17P-201ENST00000539533 CWF19L1Q69YN2 538 aaKnown RBP17.33■□□□□ 0.36
PCDHB17P-201ENST00000539533 ARNTL2Q8WYA1 636 aa17.33■□□□□ 0.36
PCDHB17P-201ENST00000539533 PRICKLE1Q96MT3 831 aaPredicted RBP17.33■□□□□ 0.36
PCDHB17P-201ENST00000539533 APOL2Q9BQE5 337 aa17.33■□□□□ 0.36
PCDHB17P-201ENST00000539533 LBHD1Q9BQE6 289 aaPredicted RBP17.33■□□□□ 0.36
PCDHB17P-201ENST00000539533 LRRC3Q9BY71 257 aa17.33■□□□□ 0.36
PCDHB17P-201ENST00000539533 VPS11Q9H270 941 aa17.33■□□□□ 0.36
PCDHB17P-201ENST00000539533 MANSC1Q9H8J5 431 aa17.33■□□□□ 0.36
PCDHB17P-201ENST00000539533 SLC17A7Q9P2U7 560 aa17.33■□□□□ 0.36
PCDHB17P-201ENST00000539533 LZTS1Q9Y250 596 aa17.33■□□□□ 0.36
PCDHB17P-201ENST00000539533 ASB3Q9Y575 518 aa17.33■□□□□ 0.36
PCDHB17P-201ENST00000539533 A0A0G2JND7 137 aa17.32■□□□□ 0.36
PCDHB17P-201ENST00000539533 CACNG3O60359 315 aa17.32■□□□□ 0.36
PCDHB17P-201ENST00000539533 HAUS5O94927 633 aa17.32■□□□□ 0.36
PCDHB17P-201ENST00000539533 MT-CYBP00156 380 aaPredicted RBP17.32■□□□□ 0.36
PCDHB17P-201ENST00000539533 C1QAP02745 245 aa17.32■□□□□ 0.36
PCDHB17P-201ENST00000539533 GJA1P17302 382 aa17.32■□□□□ 0.36
PCDHB17P-201ENST00000539533 HDCP19113 662 aa17.32■□□□□ 0.36
PCDHB17P-201ENST00000539533 MRPS35P82673 323 aaKnown RBP17.32■□□□□ 0.36
PCDHB17P-201ENST00000539533 PABPC1LQ4VXU2 614 aaKnown RBP17.32■□□□□ 0.36
PCDHB17P-201ENST00000539533 FAM109BQ6ICB4 259 aaPredicted RBP17.32■□□□□ 0.36
PCDHB17P-201ENST00000539533 CASC4Q6P4E1 433 aa17.32■□□□□ 0.36
PCDHB17P-201ENST00000539533 PTCD3Q96EY7 689 aaKnown RBP17.32■□□□□ 0.36
PCDHB17P-201ENST00000539533 CYTH2Q99418 400 aa17.32■□□□□ 0.36
PCDHB17P-201ENST00000539533 KLF6Q99612 283 aaPredicted RBP17.32■□□□□ 0.36
PCDHB17P-201ENST00000539533 TRIM55Q9BYV6 548 aa17.32■□□□□ 0.36
PCDHB17P-201ENST00000539533 GLOD4Q9HC38 313 aa17.32■□□□□ 0.36
PCDHB17P-201ENST00000539533 ARL8BQ9NVJ2 186 aa17.32■□□□□ 0.36
PCDHB17P-201ENST00000539533 HEY2Q9UBP5 337 aa17.32■□□□□ 0.36
PCDHB17P-201ENST00000539533 TSPAN3O60637 253 aa17.32■□□□□ 0.36
PCDHB17P-201ENST00000539533 GLUD1P00367 558 aa17.32■□□□□ 0.36
PCDHB17P-201ENST00000539533 IRS1P35568 1242 aa17.32■□□□□ 0.36
PCDHB17P-201ENST00000539533 SMAD3P84022 425 aaKnown RBP17.32■□□□□ 0.36
PCDHB17P-201ENST00000539533 C9orf50Q5SZB4 431 aa17.32■□□□□ 0.36
PCDHB17P-201ENST00000539533 CCDC149Q6ZUS6 474 aa17.32■□□□□ 0.36
PCDHB17P-201ENST00000539533 TMC8Q8IU68 726 aa17.32■□□□□ 0.36
PCDHB17P-201ENST00000539533 TTC16Q8NEE8 873 aa17.32■□□□□ 0.36
PCDHB17P-201ENST00000539533 OR52K2Q8NGK3 314 aa17.32■□□□□ 0.36
PCDHB17P-201ENST00000539533 DCAKDQ8WVC6 231 aa17.32■□□□□ 0.36
PCDHB17P-201ENST00000539533 PTPRN2Q92932 1015 aa17.32■□□□□ 0.36
PCDHB17P-201ENST00000539533 AZIN2Q96A70 460 aa17.32■□□□□ 0.36
PCDHB17P-201ENST00000539533 ALKBH8Q96BT7 664 aaKnown RBP17.32■□□□□ 0.36
PCDHB17P-201ENST00000539533 PABPC5Q96DU9 382 aaKnown RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms