RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 ASCL5Q7RTU5 278 aa13.28□□□□□ -0.28
CHFR-216ENST00000538235 METTL3Q86U44 580 aaKnown RBP13.28□□□□□ -0.28
CHFR-216ENST00000538235 TEX26Q8N6G2 289 aa13.28□□□□□ -0.28
CHFR-216ENST00000538235 ACTL9Q8TC94 416 aa13.28□□□□□ -0.28
CHFR-216ENST00000538235 OR8D1Q8WZ84 308 aa13.28□□□□□ -0.28
CHFR-216ENST00000538235 PRCCQ92733 491 aaPredicted RBP13.28□□□□□ -0.28
CHFR-216ENST00000538235 RBM41Q96IZ5 413 aaKnown RBP13.28□□□□□ -0.28
CHFR-216ENST00000538235 CALR3Q96L12 384 aaKnown RBP13.28□□□□□ -0.28
CHFR-216ENST00000538235 TSGA13Q96PP4 275 aa13.28□□□□□ -0.28
CHFR-216ENST00000538235 MGME1Q9BQP7 344 aa13.28□□□□□ -0.28
CHFR-216ENST00000538235 GORASP1Q9BQQ3 440 aa13.28□□□□□ -0.28
CHFR-216ENST00000538235 ORAI3Q9BRQ5 295 aa13.28□□□□□ -0.28
CHFR-216ENST00000538235 FAM126AQ9BYI3 521 aaPredicted RBP13.28□□□□□ -0.28
CHFR-216ENST00000538235 NEUROG2Q9H2A3 272 aa13.28□□□□□ -0.28
CHFR-216ENST00000538235 EBF2Q9HAK2 575 aa13.28□□□□□ -0.28
CHFR-216ENST00000538235 WSB2Q9NYS7 404 aaPredicted RBP13.28□□□□□ -0.28
CHFR-216ENST00000538235 SMARCAL1Q9NZC9 954 aa13.28□□□□□ -0.28
CHFR-216ENST00000538235 HECAQ9UBI9 543 aaPredicted RBP13.28□□□□□ -0.28
CHFR-216ENST00000538235 ITM2BQ9Y287 266 aa13.28□□□□□ -0.28
CHFR-216ENST00000538235 LRP4O75096 1905 aa13.28□□□□□ -0.28
CHFR-216ENST00000538235 ATXN2Q99700 1313 aaKnown RBP13.28□□□□□ -0.28
CHFR-216ENST00000538235 ZNF292O60281 2723 aa13.28□□□□□ -0.28
CHFR-216ENST00000538235 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.27□□□□□ -0.29
CHFR-216ENST00000538235 MIF4GDA9UHW6 222 aaKnown RBP13.27□□□□□ -0.29
CHFR-216ENST00000538235 ALOX15BO15296 676 aa13.27□□□□□ -0.29
CHFR-216ENST00000538235 ALDH1A2O94788 518 aa13.27□□□□□ -0.29
CHFR-216ENST00000538235 ATP1A1P05023 1023 aaKnown RBP13.27□□□□□ -0.29
CHFR-216ENST00000538235 PRKCGP05129 697 aa13.27□□□□□ -0.29
CHFR-216ENST00000538235 UGT2B4P06133 528 aa13.27□□□□□ -0.29
CHFR-216ENST00000538235 MMP2P08253 660 aa13.27□□□□□ -0.29
CHFR-216ENST00000538235 OTUD4Q01804 1114 aaKnown RBP13.27□□□□□ -0.29
CHFR-216ENST00000538235 DSC2Q02487 901 aa13.27□□□□□ -0.29
CHFR-216ENST00000538235 WASHC5Q12768 1159 aa13.27□□□□□ -0.29
CHFR-216ENST00000538235 IFI16Q16666 785 aaKnown RBP13.27□□□□□ -0.29
CHFR-216ENST00000538235 ARMCX6Q7L4S7 300 aa13.27□□□□□ -0.29
CHFR-216ENST00000538235 TMEFF1Q8IYR6 380 aa13.27□□□□□ -0.29
CHFR-216ENST00000538235 SYCE1Q8N0S2 351 aa13.27□□□□□ -0.29
CHFR-216ENST00000538235 ARRDC2Q8TBH0 407 aa13.27□□□□□ -0.29
CHFR-216ENST00000538235 TOE1Q96GM8 510 aaKnown RBP13.27□□□□□ -0.29
CHFR-216ENST00000538235 QKIQ96PU8 341 aaKnown RBP eCLIP13.27□□□□□ -0.29
CHFR-216ENST00000538235 PSKH2Q96QS6 385 aa13.27□□□□□ -0.29
CHFR-216ENST00000538235 WDR24Q96S15 920 aa13.27□□□□□ -0.29
CHFR-216ENST00000538235 IL12RB2Q99665 862 aa13.27□□□□□ -0.29
CHFR-216ENST00000538235 PRRX2Q99811 253 aa13.27□□□□□ -0.29
CHFR-216ENST00000538235 BRD8Q9H0E9 1235 aa13.27□□□□□ -0.29
CHFR-216ENST00000538235 C6orf106Q9H6K1 298 aaPredicted RBP13.27□□□□□ -0.29
CHFR-216ENST00000538235 IL36AQ9UHA7 158 aa13.27□□□□□ -0.29
CHFR-216ENST00000538235 HPCAL4Q9UM19 191 aa13.27□□□□□ -0.29
CHFR-216ENST00000538235 SMG5Q9UPR3 1016 aaKnown RBP13.27□□□□□ -0.29
CHFR-216ENST00000538235 CACNA1EQ15878 2313 aa13.27□□□□□ -0.29
CHFR-216ENST00000538235 PROB1E7EW31 1015 aa13.26□□□□□ -0.29
CHFR-216ENST00000538235 KRIT1O00522 736 aa13.26□□□□□ -0.29
CHFR-216ENST00000538235 MATN3O15232 486 aa13.26□□□□□ -0.29
CHFR-216ENST00000538235 TGM2P21980 687 aa13.26□□□□□ -0.29
CHFR-216ENST00000538235 CXCR5P32302 372 aa13.26□□□□□ -0.29
CHFR-216ENST00000538235 CD68P34810 354 aaPredicted RBP13.26□□□□□ -0.29
CHFR-216ENST00000538235 NNMTP40261 264 aa13.26□□□□□ -0.29
CHFR-216ENST00000538235 ADPRHP54922 357 aa13.26□□□□□ -0.29
CHFR-216ENST00000538235 IFI35P80217 286 aaPredicted RBP13.26□□□□□ -0.29
CHFR-216ENST00000538235 SEMG2Q02383 582 aa13.26□□□□□ -0.29
CHFR-216ENST00000538235 TRAF2Q12933 501 aa13.26□□□□□ -0.29
CHFR-216ENST00000538235 MYLK3Q32MK0 819 aa13.26□□□□□ -0.29
CHFR-216ENST00000538235 ALG1LQ6GMV1 187 aa13.26□□□□□ -0.29
CHFR-216ENST00000538235 NCEH1Q6PIU2 408 aa13.26□□□□□ -0.29
CHFR-216ENST00000538235 KDM7AQ6ZMT4 941 aa13.26□□□□□ -0.29
CHFR-216ENST00000538235 ZC3H18Q86VM9 953 aaKnown RBP13.26□□□□□ -0.29
CHFR-216ENST00000538235 CAMK1DQ8IU85 385 aa13.26□□□□□ -0.29
CHFR-216ENST00000538235 PLPP6Q8IY26 295 aa13.26□□□□□ -0.29
CHFR-216ENST00000538235 CCDC13Q8IYE1 715 aa13.26□□□□□ -0.29
CHFR-216ENST00000538235 TXLNBQ8N3L3 684 aa13.26□□□□□ -0.29
CHFR-216ENST00000538235 HDDC3Q8N4P3 179 aa13.26□□□□□ -0.29
CHFR-216ENST00000538235 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.26□□□□□ -0.29
CHFR-216ENST00000538235 CASKIN2Q8WXE0 1202 aa13.26□□□□□ -0.29
CHFR-216ENST00000538235 ATG4AQ8WYN0 398 aa13.26□□□□□ -0.29
CHFR-216ENST00000538235 GDAP1L1Q96MZ0 367 aa13.26□□□□□ -0.29
CHFR-216ENST00000538235 ZNF599Q96NL3 588 aa13.26□□□□□ -0.29
CHFR-216ENST00000538235 HEPHQ9BQS7 1158 aa13.26□□□□□ -0.29
CHFR-216ENST00000538235 GPR174Q9BXC1 333 aa13.26□□□□□ -0.29
CHFR-216ENST00000538235 ZNF106Q9H2Y7 1883 aaKnown RBP13.26□□□□□ -0.29
CHFR-216ENST00000538235 SMOC1Q9H4F8 434 aa13.26□□□□□ -0.29
CHFR-216ENST00000538235 CAAP1Q9H8G2 361 aa13.26□□□□□ -0.29
CHFR-216ENST00000538235 FBRSQ9HAH7 460 aa13.26□□□□□ -0.29
CHFR-216ENST00000538235 NT5MQ9NPB1 228 aa13.26□□□□□ -0.29
CHFR-216ENST00000538235 FBXL12Q9NXK8 326 aa13.26□□□□□ -0.29
CHFR-216ENST00000538235 ZFHX2Q9C0A1 2572 aaPredicted RBP13.26□□□□□ -0.29
CHFR-216ENST00000538235 A0A0U1RQS6 177 aa13.25□□□□□ -0.29
CHFR-216ENST00000538235 TSPAN11A1L157 253 aa13.25□□□□□ -0.29
CHFR-216ENST00000538235 PRR23AA6NEV1 266 aa13.25□□□□□ -0.29
CHFR-216ENST00000538235 F5H423 210 aaPredicted RBP13.25□□□□□ -0.29
CHFR-216ENST00000538235 APOC4-APOC2K7ER74 178 aa13.25□□□□□ -0.29
CHFR-216ENST00000538235 KPNA3O00505 521 aaPredicted RBP13.25□□□□□ -0.29
CHFR-216ENST00000538235 TRAFD1O14545 582 aaPredicted RBP13.25□□□□□ -0.29
CHFR-216ENST00000538235 WNT9AO14904 365 aa13.25□□□□□ -0.29
CHFR-216ENST00000538235 RNASEH2AO75792 299 aaKnown RBP13.25□□□□□ -0.29
CHFR-216ENST00000538235 IGSF6O95976 241 aa13.25□□□□□ -0.29
CHFR-216ENST00000538235 APOC2P02655 101 aa13.25□□□□□ -0.29
CHFR-216ENST00000538235 DNTTP04053 509 aa13.25□□□□□ -0.29
CHFR-216ENST00000538235 IGHV4-34P06331 123 aa13.25□□□□□ -0.29
CHFR-216ENST00000538235 C5AR1P21730 350 aa13.25□□□□□ -0.29
CHFR-216ENST00000538235 CCNCP24863 283 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms