RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 CMTM5Q96DZ9 223 aa6.75□□□□□ -1.33
USP28-202ENST00000535607 CDCA5Q96FF9 252 aa6.75□□□□□ -1.33
USP28-202ENST00000535607 APOPT1Q96IL0 206 aa6.75□□□□□ -1.33
USP28-202ENST00000535607 VCPIP1Q96JH7 1222 aa6.75□□□□□ -1.33
USP28-202ENST00000535607 FAM84AQ96KN4 292 aa6.75□□□□□ -1.33
USP28-202ENST00000535607 C9orf72Q96LT7 481 aa6.75□□□□□ -1.33
USP28-202ENST00000535607 C7orf26Q96N11 449 aa6.75□□□□□ -1.33
USP28-202ENST00000535607 ACCSQ96QU6 501 aa6.75□□□□□ -1.33
USP28-202ENST00000535607 KCNK16Q96T55 309 aa6.75□□□□□ -1.33
USP28-202ENST00000535607 CYTH2Q99418 400 aa6.75□□□□□ -1.33
USP28-202ENST00000535607 SERPINI1Q99574 410 aa6.75□□□□□ -1.33
USP28-202ENST00000535607 SGPP1Q9BX95 441 aa6.75□□□□□ -1.33
USP28-202ENST00000535607 S100A14Q9HCY8 104 aa6.75□□□□□ -1.33
USP28-202ENST00000535607 SLCO1B3Q9NPD5 702 aa6.75□□□□□ -1.33
USP28-202ENST00000535607 AGPAT3Q9NRZ7 376 aa6.75□□□□□ -1.33
USP28-202ENST00000535607 DMAC2Q9NW81 257 aa6.75□□□□□ -1.33
USP28-202ENST00000535607 UCKL1Q9NWZ5 548 aa6.75□□□□□ -1.33
USP28-202ENST00000535607 HSPBP1Q9NZL4 362 aa6.75□□□□□ -1.33
USP28-202ENST00000535607 ANAPC7Q9UJX3 599 aa6.75□□□□□ -1.33
USP28-202ENST00000535607 G3BP2Q9UN86 482 aaKnown RBP6.75□□□□□ -1.33
USP28-202ENST00000535607 CHMP2BQ9UQN3 213 aa6.75□□□□□ -1.33
USP28-202ENST00000535607 ZNF510Q9Y2H8 683 aa6.75□□□□□ -1.33
USP28-202ENST00000535607 SQORQ9Y6N5 450 aa6.75□□□□□ -1.33
USP28-202ENST00000535607 TRPM7Q96QT4 1865 aa6.75□□□□□ -1.33
USP28-202ENST00000535607 PHIPQ8WWQ0 1821 aa6.74□□□□□ -1.33
USP28-202ENST00000535607 ARHGAP42A6NI28 874 aa6.74□□□□□ -1.33
USP28-202ENST00000535607 ZNF839A8K0R7 811 aa6.74□□□□□ -1.33
USP28-202ENST00000535607 TXNDC9O14530 226 aa6.74□□□□□ -1.33
USP28-202ENST00000535607 COPEO14579 308 aa6.74□□□□□ -1.33
USP28-202ENST00000535607 TGFB1I1O43294 461 aa6.74□□□□□ -1.33
USP28-202ENST00000535607 DENRO43583 198 aaKnown RBP6.74□□□□□ -1.33
USP28-202ENST00000535607 MED24O75448 989 aa6.74□□□□□ -1.33
USP28-202ENST00000535607 C8BP07358 591 aa6.74□□□□□ -1.33
USP28-202ENST00000535607 SERPINA6P08185 405 aa6.74□□□□□ -1.33
USP28-202ENST00000535607 INHBAP08476 426 aa6.74□□□□□ -1.33
USP28-202ENST00000535607 MYL2P10916 166 aa6.74□□□□□ -1.33
USP28-202ENST00000535607 ECE1P42892 770 aa6.74□□□□□ -1.33
USP28-202ENST00000535607 NSFP46459 744 aaKnown RBP6.74□□□□□ -1.33
USP28-202ENST00000535607 MARCKSL1P49006 195 aa6.74□□□□□ -1.33
USP28-202ENST00000535607 CASP4P49662 377 aa6.74□□□□□ -1.33
USP28-202ENST00000535607 CYP2J2P51589 502 aa6.74□□□□□ -1.33
USP28-202ENST00000535607 ESRRGP62508 458 aa6.74□□□□□ -1.33
USP28-202ENST00000535607 DLG4P78352 724 aa6.74□□□□□ -1.33
USP28-202ENST00000535607 COG7P83436 770 aa6.74□□□□□ -1.33
USP28-202ENST00000535607 SMAD3P84022 425 aaKnown RBP6.74□□□□□ -1.33
USP28-202ENST00000535607 TAP1Q03518 808 aa6.74□□□□□ -1.33
USP28-202ENST00000535607 PDIA2Q13087 525 aaKnown RBP6.74□□□□□ -1.33
USP28-202ENST00000535607 CBX3Q13185 183 aa6.74□□□□□ -1.33
USP28-202ENST00000535607 PRKD1Q15139 912 aaPredicted RBP6.74□□□□□ -1.33
USP28-202ENST00000535607 SLC1A5Q15758 541 aa6.74□□□□□ -1.33
USP28-202ENST00000535607 SMAD2Q15796 467 aaKnown RBP6.74□□□□□ -1.33
USP28-202ENST00000535607 PDCD4Q53EL6 469 aaKnown RBP6.74□□□□□ -1.33
USP28-202ENST00000535607 FSCBQ5H9T9 825 aa6.74□□□□□ -1.33
USP28-202ENST00000535607 ODR4Q5SWX8 454 aa6.74□□□□□ -1.33
USP28-202ENST00000535607 LRRC38Q5VT99 294 aa6.74□□□□□ -1.33
USP28-202ENST00000535607 ARMC3Q5W041 872 aa6.74□□□□□ -1.33
USP28-202ENST00000535607 GRAMD4Q6IC98 578 aa6.74□□□□□ -1.33
USP28-202ENST00000535607 ERI1Q8IV48 349 aaKnown RBP6.74□□□□□ -1.33
USP28-202ENST00000535607 WDR75Q8IWA0 830 aaKnown RBP6.74□□□□□ -1.33
USP28-202ENST00000535607 ZBED8Q8IZ13 594 aa6.74□□□□□ -1.33
USP28-202ENST00000535607 PDIK1LQ8N165 341 aa6.74□□□□□ -1.33
USP28-202ENST00000535607 C4orf33Q8N1A6 199 aa6.74□□□□□ -1.33
USP28-202ENST00000535607 MARVELD2Q8N4S9 558 aa6.74□□□□□ -1.33
USP28-202ENST00000535607 BANPQ8N9N5 519 aa6.74□□□□□ -1.33
USP28-202ENST00000535607 SMYD1Q8NB12 490 aa6.74□□□□□ -1.33
USP28-202ENST00000535607 CLRN3Q8NCR9 226 aa6.74□□□□□ -1.33
USP28-202ENST00000535607 COA7Q96BR5 231 aa6.74□□□□□ -1.33
USP28-202ENST00000535607 SIGLEC10Q96LC7 697 aa6.74□□□□□ -1.33
USP28-202ENST00000535607 C12orf42Q96LP6 360 aa6.74□□□□□ -1.33
USP28-202ENST00000535607 NLRP4Q96MN2 994 aa6.74□□□□□ -1.33
USP28-202ENST00000535607 RILPQ96NA2 401 aa6.74□□□□□ -1.33
USP28-202ENST00000535607 BIRC8Q96P09 236 aa6.74□□□□□ -1.33
USP28-202ENST00000535607 NT5C1BQ96P26 610 aa6.74□□□□□ -1.33
USP28-202ENST00000535607 ACAP3Q96P50 834 aa6.74□□□□□ -1.33
USP28-202ENST00000535607 THTPAQ9BU02 230 aa6.74□□□□□ -1.33
USP28-202ENST00000535607 MENTQ9BUN1 341 aa6.74□□□□□ -1.33
USP28-202ENST00000535607 NUF2Q9BZD4 464 aa6.74□□□□□ -1.33
USP28-202ENST00000535607 WDR11Q9BZH6 1224 aa6.74□□□□□ -1.33
USP28-202ENST00000535607 ZDHHC5Q9C0B5 715 aa6.74□□□□□ -1.33
USP28-202ENST00000535607 GPR88Q9GZN0 384 aa6.74□□□□□ -1.33
USP28-202ENST00000535607 PLGRKTQ9HBL7 147 aa6.74□□□□□ -1.33
USP28-202ENST00000535607 PCDH9Q9HC56 1237 aa6.74□□□□□ -1.33
USP28-202ENST00000535607 NMRK2Q9NPI5 230 aa6.74□□□□□ -1.33
USP28-202ENST00000535607 MRPL40Q9NQ50 206 aaKnown RBP6.74□□□□□ -1.33
USP28-202ENST00000535607 HACD3Q9P035 362 aa6.74□□□□□ -1.33
USP28-202ENST00000535607 IP6K2Q9UHH9 426 aa6.74□□□□□ -1.33
USP28-202ENST00000535607 TCEAL9Q9UHQ7 104 aa6.74□□□□□ -1.33
USP28-202ENST00000535607 AJAP1Q9UKB5 411 aaPredicted RBP6.74□□□□□ -1.33
USP28-202ENST00000535607 CROTQ9UKG9 612 aa6.74□□□□□ -1.33
USP28-202ENST00000535607 TMX2Q9Y320 296 aa6.74□□□□□ -1.33
USP28-202ENST00000535607 NR2E3Q9Y5X4 410 aa6.74□□□□□ -1.33
USP28-202ENST00000535607 MAD1L1Q9Y6D9 718 aa6.74□□□□□ -1.33
USP28-202ENST00000535607 PMF1-BGLAPU3KQ54 211 aa6.74□□□□□ -1.33
USP28-202ENST00000535607 EMSYQ7Z589 1322 aa6.74□□□□□ -1.33
USP28-202ENST00000535607 GOLGA8QA0A0J9YX86 632 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 A0A1B0GVG6 124 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 TCRBV7S2A1N4TA0A589 114 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 GOLGA8OA6NCC3 632 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 C19orf81C9J6K1 198 aa6.73□□□□□ -1.33
USP28-202ENST00000535607 F5H6K3 240 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms