RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 MMRN1Q13201 1228 aa9.8□□□□□ -0.84
SSBP3-215ENST00000533946 IHHQ14623 411 aa9.8□□□□□ -0.84
SSBP3-215ENST00000533946 POLD3Q15054 466 aaPredicted RBP9.8□□□□□ -0.84
SSBP3-215ENST00000533946 ST3GAL2Q16842 350 aa9.8□□□□□ -0.84
SSBP3-215ENST00000533946 TMEM259Q4ZIN3 620 aa9.8□□□□□ -0.84
SSBP3-215ENST00000533946 DCUN1D2Q6PH85 259 aa9.8□□□□□ -0.84
SSBP3-215ENST00000533946 GCNT7Q6ZNI0 430 aa9.8□□□□□ -0.84
SSBP3-215ENST00000533946 ERN2Q76MJ5 926 aaKnown RBP9.8□□□□□ -0.84
SSBP3-215ENST00000533946 SLC25A45Q8N413 288 aa9.8□□□□□ -0.84
SSBP3-215ENST00000533946 RYBPQ8N488 228 aaPredicted RBP9.8□□□□□ -0.84
SSBP3-215ENST00000533946 TMEM145Q8NBT3 493 aa9.8□□□□□ -0.84
SSBP3-215ENST00000533946 RNF214Q8ND24 703 aa9.8□□□□□ -0.84
SSBP3-215ENST00000533946 TMIEQ8NEW7 156 aa9.8□□□□□ -0.84
SSBP3-215ENST00000533946 OR13H1Q8NG92 308 aa9.8□□□□□ -0.84
SSBP3-215ENST00000533946 SAP25Q8TEE9 199 aa9.8□□□□□ -0.84
SSBP3-215ENST00000533946 ZNF653Q96CK0 615 aa9.8□□□□□ -0.84
SSBP3-215ENST00000533946 KLHL32Q96NJ5 620 aa9.8□□□□□ -0.84
SSBP3-215ENST00000533946 KLF6Q99612 283 aaPredicted RBP9.8□□□□□ -0.84
SSBP3-215ENST00000533946 NAT10Q9H0A0 1025 aaKnown RBP9.8□□□□□ -0.84
SSBP3-215ENST00000533946 THAP2Q9H0W7 228 aa9.8□□□□□ -0.84
SSBP3-215ENST00000533946 PCED1AQ9H1Q7 454 aa9.8□□□□□ -0.84
SSBP3-215ENST00000533946 TCEAL2Q9H3H9 227 aaPredicted RBP9.8□□□□□ -0.84
SSBP3-215ENST00000533946 DHX35Q9H5Z1 703 aaKnown RBP9.8□□□□□ -0.84
SSBP3-215ENST00000533946 LRRC19Q9H756 370 aa9.8□□□□□ -0.84
SSBP3-215ENST00000533946 PDFQ9HBH1 243 aa9.8□□□□□ -0.84
SSBP3-215ENST00000533946 OSGEPQ9NPF4 335 aa9.8□□□□□ -0.84
SSBP3-215ENST00000533946 CWC15Q9P013 229 aaKnown RBP9.8□□□□□ -0.84
SSBP3-215ENST00000533946 SCML1Q9UN30 329 aa9.8□□□□□ -0.84
SSBP3-215ENST00000533946 AP4E1Q9UPM8 1137 aa9.8□□□□□ -0.84
SSBP3-215ENST00000533946 COQ6Q9Y2Z9 468 aa9.8□□□□□ -0.84
SSBP3-215ENST00000533946 FADS3Q9Y5Q0 445 aa9.8□□□□□ -0.84
SSBP3-215ENST00000533946 IGLON5A6NGN9 336 aa9.79□□□□□ -0.84
SSBP3-215ENST00000533946 C16orf96A6NNT2 1141 aa9.79□□□□□ -0.84
SSBP3-215ENST00000533946 TRIM38O00635 465 aa9.79□□□□□ -0.84
SSBP3-215ENST00000533946 SCAMP1O15126 338 aa9.79□□□□□ -0.84
SSBP3-215ENST00000533946 BUB1O43683 1085 aa9.79□□□□□ -0.84
SSBP3-215ENST00000533946 RAMP2O60895 175 aa9.79□□□□□ -0.84
SSBP3-215ENST00000533946 PCDH8O95206 1070 aa9.79□□□□□ -0.84
SSBP3-215ENST00000533946 MAP3K6O95382 1288 aa9.79□□□□□ -0.84
SSBP3-215ENST00000533946 GIMD1P0DJR0 217 aa9.79□□□□□ -0.84
SSBP3-215ENST00000533946 TIMP2P16035 220 aa9.79□□□□□ -0.84
SSBP3-215ENST00000533946 AMPD1P23109 780 aa9.79□□□□□ -0.84
SSBP3-215ENST00000533946 CASP14P31944 242 aa9.79□□□□□ -0.84
SSBP3-215ENST00000533946 ETFBP38117 255 aa9.79□□□□□ -0.84
SSBP3-215ENST00000533946 DPP6P42658 865 aa9.79□□□□□ -0.84
SSBP3-215ENST00000533946 MAPKAPK2P49137 400 aa9.79□□□□□ -0.84
SSBP3-215ENST00000533946 PAPOLAP51003 745 aaKnown RBP9.79□□□□□ -0.84
SSBP3-215ENST00000533946 OXCT1P55809 520 aa9.79□□□□□ -0.84
SSBP3-215ENST00000533946 MAPK8IP2Q13387 824 aaPredicted RBP9.79□□□□□ -0.84
SSBP3-215ENST00000533946 SERINC3Q13530 473 aa9.79□□□□□ -0.84
SSBP3-215ENST00000533946 TCEA2Q15560 299 aa9.79□□□□□ -0.84
SSBP3-215ENST00000533946 MYLK3Q32MK0 819 aa9.79□□□□□ -0.84
SSBP3-215ENST00000533946 PPP6R3Q5H9R7 873 aaPredicted RBP9.79□□□□□ -0.84
SSBP3-215ENST00000533946 ADAT2Q7Z6V5 191 aaKnown RBP9.79□□□□□ -0.84
SSBP3-215ENST00000533946 PELI3Q8N2H9 469 aa9.79□□□□□ -0.84
SSBP3-215ENST00000533946 EID2Q8N6I1 236 aa9.79□□□□□ -0.84
SSBP3-215ENST00000533946 ELF4Q99607 663 aaPredicted RBP9.79□□□□□ -0.84
SSBP3-215ENST00000533946 HEPHQ9BQS7 1158 aa9.79□□□□□ -0.84
SSBP3-215ENST00000533946 ISCUQ9H1K1 167 aa9.79□□□□□ -0.84
SSBP3-215ENST00000533946 MBNL1Q9NR56 388 aaKnown RBP9.79□□□□□ -0.84
SSBP3-215ENST00000533946 KLHL11Q9NVR0 708 aa9.79□□□□□ -0.84
SSBP3-215ENST00000533946 MYO6Q9UM54 1294 aa9.79□□□□□ -0.84
SSBP3-215ENST00000533946 APC2O95996 2303 aa9.79□□□□□ -0.84
SSBP3-215ENST00000533946 ASXL3Q9C0F0 2248 aa9.79□□□□□ -0.84
SSBP3-215ENST00000533946 WASH4PA8MWX3 477 aa9.78□□□□□ -0.84
SSBP3-215ENST00000533946 C1QTNF3-AMACRE9PGA6 284 aa9.78□□□□□ -0.84
SSBP3-215ENST00000533946 ALOX15BO15296 676 aa9.78□□□□□ -0.84
SSBP3-215ENST00000533946 MMP20O60882 483 aa9.78□□□□□ -0.84
SSBP3-215ENST00000533946 NEBLO76041 1014 aa9.78□□□□□ -0.84
SSBP3-215ENST00000533946 DKK1O94907 266 aa9.78□□□□□ -0.84
SSBP3-215ENST00000533946 CER1O95813 267 aa9.78□□□□□ -0.84
SSBP3-215ENST00000533946 ADRB3P13945 408 aa9.78□□□□□ -0.84
SSBP3-215ENST00000533946 ERCC2P18074 760 aa9.78□□□□□ -0.84
SSBP3-215ENST00000533946 IL4RP24394 825 aa9.78□□□□□ -0.84
SSBP3-215ENST00000533946 EIF4A3P38919 411 aaKnown RBP9.78□□□□□ -0.84
SSBP3-215ENST00000533946 C21orf59P57076 290 aa9.78□□□□□ -0.84
SSBP3-215ENST00000533946 TAS2R40P59535 323 aa9.78□□□□□ -0.84
SSBP3-215ENST00000533946 SLC14A1Q13336 389 aa9.78□□□□□ -0.84
SSBP3-215ENST00000533946 DPYSQ14117 519 aa9.78□□□□□ -0.84
SSBP3-215ENST00000533946 E2F5Q15329 346 aa9.78□□□□□ -0.84
SSBP3-215ENST00000533946 ARL13BQ3SXY8 428 aa9.78□□□□□ -0.84
SSBP3-215ENST00000533946 FILIP1LQ4L180 1135 aa9.78□□□□□ -0.84
SSBP3-215ENST00000533946 EFHC2Q5JST6 749 aa9.78□□□□□ -0.84
SSBP3-215ENST00000533946 AFMIDQ63HM1 303 aa9.78□□□□□ -0.84
SSBP3-215ENST00000533946 NAPEPLDQ6IQ20 393 aa9.78□□□□□ -0.84
SSBP3-215ENST00000533946 RETSATQ6NUM9 610 aa9.78□□□□□ -0.84
SSBP3-215ENST00000533946 DHRS13Q6UX07 377 aa9.78□□□□□ -0.84
SSBP3-215ENST00000533946 UNQ6494/PRO21346Q6UXR6 183 aa9.78□□□□□ -0.84
SSBP3-215ENST00000533946 ZNF783Q6ZMS7 281 aa9.78□□□□□ -0.84
SSBP3-215ENST00000533946 RABEPKQ7Z6M1 372 aa9.78□□□□□ -0.84
SSBP3-215ENST00000533946 TRIM69Q86WT6 500 aa9.78□□□□□ -0.84
SSBP3-215ENST00000533946 HORMAD1Q86X24 394 aa9.78□□□□□ -0.84
SSBP3-215ENST00000533946 ZNF354CQ86Y25 554 aa9.78□□□□□ -0.84
SSBP3-215ENST00000533946 UMODL1-AS1Q8N2C9 162 aa9.78□□□□□ -0.84
SSBP3-215ENST00000533946 PGBD5Q8N414 524 aa9.78□□□□□ -0.84
SSBP3-215ENST00000533946 PCDH20Q8N6Y1 951 aaKnown RBP9.78□□□□□ -0.84
SSBP3-215ENST00000533946 TSEN2Q8NCE0 465 aaKnown RBP9.78□□□□□ -0.84
SSBP3-215ENST00000533946 CHP1Q99653 195 aa9.78□□□□□ -0.84
SSBP3-215ENST00000533946 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.78□□□□□ -0.84
SSBP3-215ENST00000533946 WRAP53Q9BUR4 548 aaKnown RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms