RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 MCOLN3Q8TDD5 553 aa15.24■□□□□ 0.03
USP47-207ENST00000527733 PRPF18Q99633 342 aaKnown RBP15.24■□□□□ 0.03
USP47-207ENST00000527733 OMDQ99983 421 aa15.24■□□□□ 0.03
USP47-207ENST00000527733 GBA3Q9H227 469 aa15.24■□□□□ 0.03
USP47-207ENST00000527733 STN1Q9H668 368 aaKnown RBP15.24■□□□□ 0.03
USP47-207ENST00000527733 THAP1Q9NVV9 213 aa15.24■□□□□ 0.03
USP47-207ENST00000527733 DNAJB4Q9UDY4 337 aa15.24■□□□□ 0.03
USP47-207ENST00000527733 FBXL21Q9UKT6 434 aa15.24■□□□□ 0.03
USP47-207ENST00000527733 CHKBQ9Y259 395 aa15.24■□□□□ 0.03
USP47-207ENST00000527733 GATMP50440 423 aa15.24■□□□□ 0.03
USP47-207ENST00000527733 LBX1P52954 281 aa15.24■□□□□ 0.03
USP47-207ENST00000527733 STX5Q13190 355 aa15.24■□□□□ 0.03
USP47-207ENST00000527733 CYP1B1Q16678 543 aa15.24■□□□□ 0.03
USP47-207ENST00000527733 C16orf89Q6UX73 402 aa15.24■□□□□ 0.03
USP47-207ENST00000527733 SLC39A5Q6ZMH5 540 aa15.24■□□□□ 0.03
USP47-207ENST00000527733 PHACTR4Q8IZ21 702 aa15.24■□□□□ 0.03
USP47-207ENST00000527733 HDAC10Q969S8 669 aa15.24■□□□□ 0.03
USP47-207ENST00000527733 PHACTR1Q9C0D0 580 aa15.24■□□□□ 0.03
USP47-207ENST00000527733 NOP53Q9NZM5 478 aaKnown RBP15.24■□□□□ 0.03
USP47-207ENST00000527733 MAP3K13O43283 966 aa15.24■□□□□ 0.03
USP47-207ENST00000527733 SOD2P04179 222 aa15.24■□□□□ 0.03
USP47-207ENST00000527733 CSF2RAP15509 400 aa15.24■□□□□ 0.03
USP47-207ENST00000527733 MAGEA11P43364 429 aa15.24■□□□□ 0.03
USP47-207ENST00000527733 GRM3Q14832 879 aa15.24■□□□□ 0.03
USP47-207ENST00000527733 CERCAMQ5T4B2 595 aa15.24■□□□□ 0.03
USP47-207ENST00000527733 HFE2Q6ZVN8 426 aa15.24■□□□□ 0.03
USP47-207ENST00000527733 IQCKQ8N0W5 287 aa15.24■□□□□ 0.03
USP47-207ENST00000527733 ZNF567Q8N184 647 aa15.24■□□□□ 0.03
USP47-207ENST00000527733 ACMSDQ8TDX5 336 aa15.24■□□□□ 0.03
USP47-207ENST00000527733 SLC25A51Q9H1U9 297 aa15.24■□□□□ 0.03
USP47-207ENST00000527733 BRD9Q9H8M2 597 aa15.24■□□□□ 0.03
USP47-207ENST00000527733 GID8Q9NWU2 228 aa15.24■□□□□ 0.03
USP47-207ENST00000527733 SCML2Q9UQR0 700 aa15.24■□□□□ 0.03
USP47-207ENST00000527733 EIF3LQ9Y262 564 aaKnown RBP15.24■□□□□ 0.03
USP47-207ENST00000527733 BTN3A1O00481 513 aa15.24■□□□□ 0.03
USP47-207ENST00000527733 AP2A1O95782 977 aa15.24■□□□□ 0.03
USP47-207ENST00000527733 SP100P23497 879 aaPredicted RBP15.24■□□□□ 0.03
USP47-207ENST00000527733 CRYMQ14894 314 aa15.24■□□□□ 0.03
USP47-207ENST00000527733 FAM46CQ5VWP2 391 aa15.24■□□□□ 0.03
USP47-207ENST00000527733 ATXN2LQ8WWM7 1075 aaKnown RBP15.24■□□□□ 0.03
USP47-207ENST00000527733 IGSF21Q96ID5 467 aa15.24■□□□□ 0.03
USP47-207ENST00000527733 OSBPL2Q9H1P3 480 aa15.24■□□□□ 0.03
USP47-207ENST00000527733 LRRC4CQ9HCJ2 640 aa15.24■□□□□ 0.03
USP47-207ENST00000527733 DYRK1BQ9Y463 629 aa15.24■□□□□ 0.03
USP47-207ENST00000527733 MTMR11A4FU01 709 aa15.23■□□□□ 0.03
USP47-207ENST00000527733 PDZK1P1A8MUH7 402 aa15.23■□□□□ 0.03
USP47-207ENST00000527733 ALADP13716 330 aa15.23■□□□□ 0.03
USP47-207ENST00000527733 COL5A3P25940 1745 aaPredicted RBP15.23■□□□□ 0.03
USP47-207ENST00000527733 PPP2R2DQ66LE6 453 aa15.23■□□□□ 0.03
USP47-207ENST00000527733 FAM45BPQ6NSW5 357 aa15.23■□□□□ 0.03
USP47-207ENST00000527733 FAM45AQ8TCE6 357 aa15.23■□□□□ 0.03
USP47-207ENST00000527733 CXorf40AQ8TE69 158 aa15.23■□□□□ 0.03
USP47-207ENST00000527733 TRIM45Q9H8W5 580 aaPredicted RBP15.23■□□□□ 0.03
USP47-207ENST00000527733 NDST3O95803 873 aa15.23■□□□□ 0.03
USP47-207ENST00000527733 TTMPQ5BVD1 217 aa15.23■□□□□ 0.03
USP47-207ENST00000527733 RGS9BPQ6ZS82 235 aa15.23■□□□□ 0.03
USP47-207ENST00000527733 NKAPQ8N5F7 415 aaKnown RBP15.23■□□□□ 0.03
USP47-207ENST00000527733 CASP10Q92851 521 aa15.23■□□□□ 0.03
USP47-207ENST00000527733 GUCA1CO95843 209 aa15.23■□□□□ 0.03
USP47-207ENST00000527733 KRT16P08779 473 aa15.23■□□□□ 0.03
USP47-207ENST00000527733 CTPS1P17812 591 aa15.23■□□□□ 0.03
USP47-207ENST00000527733 PTGIRP43119 386 aa15.23■□□□□ 0.03
USP47-207ENST00000527733 SLC1A6P48664 564 aa15.23■□□□□ 0.03
USP47-207ENST00000527733 OGDHQ02218 1023 aa15.23■□□□□ 0.03
USP47-207ENST00000527733 IL10RBQ08334 325 aa15.23■□□□□ 0.03
USP47-207ENST00000527733 PTK2BQ14289 1009 aa15.23■□□□□ 0.03
USP47-207ENST00000527733 TAF11Q15544 211 aa15.23■□□□□ 0.03
USP47-207ENST00000527733 PTPRNQ16849 979 aa15.23■□□□□ 0.03
USP47-207ENST00000527733 RNASEH2BQ5TBB1 312 aaKnown RBP15.23■□□□□ 0.03
USP47-207ENST00000527733 CACHD1Q5VU97 1274 aa15.23■□□□□ 0.03
USP47-207ENST00000527733 TXNRD3NBQ6F5E7 133 aa15.23■□□□□ 0.03
USP47-207ENST00000527733 KRT80Q6KB66 452 aa15.23■□□□□ 0.03
USP47-207ENST00000527733 PKN3Q6P5Z2 889 aa15.23■□□□□ 0.03
USP47-207ENST00000527733 OR6K2Q8NGY2 324 aa15.23■□□□□ 0.03
USP47-207ENST00000527733 ING5Q8WYH8 240 aa15.23■□□□□ 0.03
USP47-207ENST00000527733 HMCESQ96FZ2 354 aa15.23■□□□□ 0.03
USP47-207ENST00000527733 THTPAQ9BU02 230 aa15.23■□□□□ 0.03
USP47-207ENST00000527733 BPIFA1Q9NP55 256 aa15.23■□□□□ 0.03
USP47-207ENST00000527733 ZMYM5Q9UJ78 669 aa15.23■□□□□ 0.03
USP47-207ENST00000527733 CLCA2Q9UQC9 943 aa15.23■□□□□ 0.03
USP47-207ENST00000527733 SHANK3Q9BYB0 1731 aa15.23■□□□□ 0.03
USP47-207ENST00000527733 PIAS1O75925 651 aa15.22■□□□□ 0.03
USP47-207ENST00000527733 ITGA2BP08514 1039 aa15.22■□□□□ 0.03
USP47-207ENST00000527733 DGKAP23743 735 aa15.22■□□□□ 0.03
USP47-207ENST00000527733 COPAP53621 1224 aa15.22■□□□□ 0.03
USP47-207ENST00000527733 POM121L1PQ3SYA9 428 aa15.22■□□□□ 0.03
USP47-207ENST00000527733 STXBP5Q5T5C0 1151 aa15.22■□□□□ 0.03
USP47-207ENST00000527733 OR8D1Q8WZ84 308 aa15.22■□□□□ 0.03
USP47-207ENST00000527733 GBP5Q96PP8 586 aa15.22■□□□□ 0.03
USP47-207ENST00000527733 GPR88Q9GZN0 384 aa15.22■□□□□ 0.03
USP47-207ENST00000527733 MIOSQ9NXC5 875 aa15.22■□□□□ 0.03
USP47-207ENST00000527733 PTGESO14684 152 aa15.22■□□□□ 0.03
USP47-207ENST00000527733 FGF18O76093 207 aa15.22■□□□□ 0.03
USP47-207ENST00000527733 LTA4HP09960 611 aaKnown RBP15.22■□□□□ 0.03
USP47-207ENST00000527733 HAPLN1P10915 354 aaPredicted RBP15.22■□□□□ 0.03
USP47-207ENST00000527733 PTPN3P26045 913 aa15.22■□□□□ 0.03
USP47-207ENST00000527733 GABRB2P47870 512 aa15.22■□□□□ 0.03
USP47-207ENST00000527733 SKOR1P84550 965 aa15.22■□□□□ 0.03
USP47-207ENST00000527733 CYP4F8P98187 520 aa15.22■□□□□ 0.03
USP47-207ENST00000527733 MARCH8Q5T0T0 291 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms