RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 APOEP02649 317 aa7.21□□□□□ -1.26
VPS11-201ENST00000524454 ZSCAN5DPP0CG00 497 aa7.21□□□□□ -1.26
VPS11-201ENST00000524454 MBL2P11226 248 aaPredicted RBP7.21□□□□□ -1.26
VPS11-201ENST00000524454 PRKCHP24723 683 aa7.21□□□□□ -1.26
VPS11-201ENST00000524454 CCNCP24863 283 aa7.21□□□□□ -1.26
VPS11-201ENST00000524454 CNTFP26441 200 aa7.21□□□□□ -1.26
VPS11-201ENST00000524454 LSP1P33241 339 aa7.21□□□□□ -1.26
VPS11-201ENST00000524454 GARSP41250 739 aaKnown RBP7.21□□□□□ -1.26
VPS11-201ENST00000524454 NDST2P52849 883 aa7.21□□□□□ -1.26
VPS11-201ENST00000524454 ATXN1P54253 815 aaKnown RBP7.21□□□□□ -1.26
VPS11-201ENST00000524454 MLLT6P55198 1093 aaPredicted RBP7.21□□□□□ -1.26
VPS11-201ENST00000524454 GEMIN4P57678 1058 aaKnown RBP7.21□□□□□ -1.26
VPS11-201ENST00000524454 IFI35P80217 286 aaPredicted RBP7.21□□□□□ -1.26
VPS11-201ENST00000524454 SLC10A2Q12908 348 aaPredicted RBP7.21□□□□□ -1.26
VPS11-201ENST00000524454 USP4Q13107 963 aa7.21□□□□□ -1.26
VPS11-201ENST00000524454 DNAJC3Q13217 504 aa7.21□□□□□ -1.26
VPS11-201ENST00000524454 FZD5Q13467 585 aa7.21□□□□□ -1.26
VPS11-201ENST00000524454 TRIP4Q15650 581 aaPredicted RBP7.21□□□□□ -1.26
VPS11-201ENST00000524454 C4orf48Q5BLP8 95 aa7.21□□□□□ -1.26
VPS11-201ENST00000524454 ANKRD20A2Q5SQ80 823 aa7.21□□□□□ -1.26
VPS11-201ENST00000524454 TMCO4Q5TGY1 634 aa7.21□□□□□ -1.26
VPS11-201ENST00000524454 ANKRD20A1Q5TYW2 823 aa7.21□□□□□ -1.26
VPS11-201ENST00000524454 ANKRD20A3Q5VUR7 823 aa7.21□□□□□ -1.26
VPS11-201ENST00000524454 AFMIDQ63HM1 303 aa7.21□□□□□ -1.26
VPS11-201ENST00000524454 STEAP4Q687X5 459 aa7.21□□□□□ -1.26
VPS11-201ENST00000524454 C1orf228Q6PIY5 440 aa7.21□□□□□ -1.26
VPS11-201ENST00000524454 TSSK4Q6SA08 328 aa7.21□□□□□ -1.26
VPS11-201ENST00000524454 NPNTQ6UXI9 565 aa7.21□□□□□ -1.26
VPS11-201ENST00000524454 ZNF852Q6ZMS4 543 aa7.21□□□□□ -1.26
VPS11-201ENST00000524454 Q6ZS52 159 aa7.21□□□□□ -1.26
VPS11-201ENST00000524454 SCD5Q86SK9 330 aa7.21□□□□□ -1.26
VPS11-201ENST00000524454 ALYREFQ86V81 257 aaKnown RBP7.21□□□□□ -1.26
VPS11-201ENST00000524454 UMODL1-AS1Q8N2C9 162 aa7.21□□□□□ -1.26
VPS11-201ENST00000524454 OR2W6PQ8NHA6 318 aa7.21□□□□□ -1.26
VPS11-201ENST00000524454 FAM3CQ92520 227 aa7.21□□□□□ -1.26
VPS11-201ENST00000524454 FOXJ1Q92949 421 aa7.21□□□□□ -1.26
VPS11-201ENST00000524454 E2F7Q96AV8 911 aa7.21□□□□□ -1.26
VPS11-201ENST00000524454 MTBPQ96DY7 904 aa7.21□□□□□ -1.26
VPS11-201ENST00000524454 P2RY11Q96G91 374 aa7.21□□□□□ -1.26
VPS11-201ENST00000524454 BTN2A3PQ96KV6 586 aa7.21□□□□□ -1.26
VPS11-201ENST00000524454 FAM118BQ9BPY3 351 aa7.21□□□□□ -1.26
VPS11-201ENST00000524454 EPN3Q9H201 632 aa7.21□□□□□ -1.26
VPS11-201ENST00000524454 LINC00597Q9H2U6 94 aa7.21□□□□□ -1.26
VPS11-201ENST00000524454 NMUR1Q9HB89 426 aa7.21□□□□□ -1.26
VPS11-201ENST00000524454 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.21□□□□□ -1.26
VPS11-201ENST00000524454 POLR3BQ9NW08 1133 aaPredicted RBP7.21□□□□□ -1.26
VPS11-201ENST00000524454 SPATA6Q9NWH7 488 aaPredicted RBP7.21□□□□□ -1.26
VPS11-201ENST00000524454 THG1LQ9NWX6 298 aaKnown RBP7.21□□□□□ -1.26
VPS11-201ENST00000524454 DUS2Q9NX74 493 aaKnown RBP7.21□□□□□ -1.26
VPS11-201ENST00000524454 OBP2AQ9NY56 170 aa7.21□□□□□ -1.26
VPS11-201ENST00000524454 CFAP97Q9P2B7 532 aa7.21□□□□□ -1.26
VPS11-201ENST00000524454 NOVA2Q9UNW9 492 aaKnown RBP7.21□□□□□ -1.26
VPS11-201ENST00000524454 CPQQ9Y646 472 aa7.21□□□□□ -1.26
VPS11-201ENST00000524454 ZDBF2Q9HCK1 2354 aa7.21□□□□□ -1.26
VPS11-201ENST00000524454 ATG2BQ96BY7 2078 aa7.21□□□□□ -1.26
VPS11-201ENST00000524454 A0A1W2PQH9 124 aa7.2□□□□□ -1.26
VPS11-201ENST00000524454 MAGEB16A2A368 324 aa7.2□□□□□ -1.26
VPS11-201ENST00000524454 ANTXRLA6NF34 631 aa7.2□□□□□ -1.26
VPS11-201ENST00000524454 I6L893 689 aaPredicted RBP7.2□□□□□ -1.26
VPS11-201ENST00000524454 ALDH1A2O94788 518 aa7.2□□□□□ -1.26
VPS11-201ENST00000524454 LRIG2O94898 1065 aa7.2□□□□□ -1.26
VPS11-201ENST00000524454 AP2A1O95782 977 aa7.2□□□□□ -1.26
VPS11-201ENST00000524454 TBX18O95935 607 aa7.2□□□□□ -1.26
VPS11-201ENST00000524454 FAM107AO95990 144 aa7.2□□□□□ -1.26
VPS11-201ENST00000524454 APRTP07741 180 aa7.2□□□□□ -1.26
VPS11-201ENST00000524454 ETS1P14921 441 aa7.2□□□□□ -1.26
VPS11-201ENST00000524454 RHOQP17081 205 aa7.2□□□□□ -1.26
VPS11-201ENST00000524454 PFKLP17858 780 aa7.2□□□□□ -1.26
VPS11-201ENST00000524454 AMPD1P23109 780 aa7.2□□□□□ -1.26
VPS11-201ENST00000524454 EPHB2P29323 1055 aa7.2□□□□□ -1.26
VPS11-201ENST00000524454 WEE1P30291 646 aa7.2□□□□□ -1.26
VPS11-201ENST00000524454 PITX1P78337 314 aaPredicted RBP7.2□□□□□ -1.26
VPS11-201ENST00000524454 WASHC5Q12768 1159 aa7.2□□□□□ -1.26
VPS11-201ENST00000524454 MTAPQ13126 283 aa7.2□□□□□ -1.26
VPS11-201ENST00000524454 RUNX3Q13761 415 aa7.2□□□□□ -1.26
VPS11-201ENST00000524454 SLC14A2Q15849 920 aa7.2□□□□□ -1.26
VPS11-201ENST00000524454 ANO4Q32M45 955 aa7.2□□□□□ -1.26
VPS11-201ENST00000524454 ITPRIPL2Q3MIP1 535 aa7.2□□□□□ -1.26
VPS11-201ENST00000524454 C5orf22Q49AR2 442 aa7.2□□□□□ -1.26
VPS11-201ENST00000524454 LGSNQ5TDP6 509 aa7.2□□□□□ -1.26
VPS11-201ENST00000524454 ANKRD22Q5VYY1 191 aa7.2□□□□□ -1.26
VPS11-201ENST00000524454 KCTD16Q68DU8 428 aa7.2□□□□□ -1.26
VPS11-201ENST00000524454 LRRC8BQ6P9F7 803 aa7.2□□□□□ -1.26
VPS11-201ENST00000524454 LINC00523Q86TU6 105 aa7.2□□□□□ -1.26
VPS11-201ENST00000524454 TRABD2AQ86V40 505 aa7.2□□□□□ -1.26
VPS11-201ENST00000524454 CAND1Q86VP6 1230 aaKnown RBP7.2□□□□□ -1.26
VPS11-201ENST00000524454 PALM2Q8IXS6 379 aa7.2□□□□□ -1.26
VPS11-201ENST00000524454 MAML2Q8IZL2 1156 aaPredicted RBP7.2□□□□□ -1.26
VPS11-201ENST00000524454 PYROXD2Q8N2H3 581 aa7.2□□□□□ -1.26
VPS11-201ENST00000524454 SH2D3CQ8N5H7 860 aa7.2□□□□□ -1.26
VPS11-201ENST00000524454 RTL3Q8N8U3 475 aaKnown RBP7.2□□□□□ -1.26
VPS11-201ENST00000524454 ATP6V0D2Q8N8Y2 350 aa7.2□□□□□ -1.26
VPS11-201ENST00000524454 FBXO36Q8NEA4 188 aa7.2□□□□□ -1.26
VPS11-201ENST00000524454 EPS8L3Q8TE67 593 aaKnown RBP7.2□□□□□ -1.26
VPS11-201ENST00000524454 MAML1Q92585 1016 aa7.2□□□□□ -1.26
VPS11-201ENST00000524454 ARHGEF2Q92974 986 aaKnown RBP7.2□□□□□ -1.26
VPS11-201ENST00000524454 TTC17Q96AE7 1141 aa7.2□□□□□ -1.26
VPS11-201ENST00000524454 MRGPRX2Q96LB1 330 aa7.2□□□□□ -1.26
VPS11-201ENST00000524454 EBNA1BP2Q99848 306 aaKnown RBP7.2□□□□□ -1.26
VPS11-201ENST00000524454 FAM83CQ9BQN1 747 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms