RNA–Protein interactions for RNA: ENST00000508715.5

PTPN20-220, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-220ENST00000508715 NIPAL4Q0D2K0 466 aa10.49□□□□□ -0.73
PTPN20-220ENST00000508715 AP1B1Q10567 949 aa10.49□□□□□ -0.73
PTPN20-220ENST00000508715 SRSF5Q13243 272 aaKnown RBP10.49□□□□□ -0.73
PTPN20-220ENST00000508715 XRCC4Q13426 336 aa10.49□□□□□ -0.73
PTPN20-220ENST00000508715 ELAVL3Q14576 367 aaKnown RBP10.49□□□□□ -0.73
PTPN20-220ENST00000508715 RFTN1Q14699 578 aaPredicted RBP10.49□□□□□ -0.73
PTPN20-220ENST00000508715 STARD3Q14849 445 aa10.49□□□□□ -0.73
PTPN20-220ENST00000508715 OASLQ15646 514 aaKnown RBP10.49□□□□□ -0.73
PTPN20-220ENST00000508715 MYLK3Q32MK0 819 aa10.49□□□□□ -0.73
PTPN20-220ENST00000508715 MAP7D1Q3KQU3 841 aa10.49□□□□□ -0.73
PTPN20-220ENST00000508715 SLC45A4Q5BKX6 768 aa10.49□□□□□ -0.73
PTPN20-220ENST00000508715 ARSIQ5FYB1 569 aa10.49□□□□□ -0.73
PTPN20-220ENST00000508715 SEL1L2Q5TEA6 688 aa10.49□□□□□ -0.73
PTPN20-220ENST00000508715 HEATR6Q6AI08 1181 aaKnown RBP10.49□□□□□ -0.73
PTPN20-220ENST00000508715 ALG1LQ6GMV1 187 aa10.49□□□□□ -0.73
PTPN20-220ENST00000508715 ZSWIM9Q86XI8 627 aa10.49□□□□□ -0.73
PTPN20-220ENST00000508715 MMAAQ8IVH4 418 aaKnown RBP10.49□□□□□ -0.73
PTPN20-220ENST00000508715 AADATQ8N5Z0 425 aa10.49□□□□□ -0.73
PTPN20-220ENST00000508715 FAM160A2Q8N612 972 aaPredicted RBP10.49□□□□□ -0.73
PTPN20-220ENST00000508715 PRELID2Q8N945 189 aa10.49□□□□□ -0.73
PTPN20-220ENST00000508715 CCNYQ8ND76 341 aa10.49□□□□□ -0.73
PTPN20-220ENST00000508715 RLN3Q8WXF3 142 aa10.49□□□□□ -0.73
PTPN20-220ENST00000508715 FAM131CQ96AQ9 280 aa10.49□□□□□ -0.73
PTPN20-220ENST00000508715 PBKQ96KB5 322 aa10.49□□□□□ -0.73
PTPN20-220ENST00000508715 GORASP1Q9BQQ3 440 aa10.49□□□□□ -0.73
PTPN20-220ENST00000508715 POLMQ9NP87 494 aaPredicted RBP10.49□□□□□ -0.73
PTPN20-220ENST00000508715 RBM22Q9NW64 420 aaKnown RBP eCLIP10.49□□□□□ -0.73
PTPN20-220ENST00000508715 USP36Q9P275 1121 aaKnown RBP10.49□□□□□ -0.73
PTPN20-220ENST00000508715 SEPT3Q9UH03 358 aa10.49□□□□□ -0.73
PTPN20-220ENST00000508715 MBD1Q9UIS9 605 aaPredicted RBP10.49□□□□□ -0.73
PTPN20-220ENST00000508715 TTC7AQ9ULT0 858 aaPredicted RBP10.49□□□□□ -0.73
PTPN20-220ENST00000508715 WDR87Q6ZQQ6 2873 aa10.49□□□□□ -0.73
PTPN20-220ENST00000508715 PLXNA2O75051 1894 aa10.49□□□□□ -0.73
PTPN20-220ENST00000508715 TP53BP1Q12888 1972 aaPredicted RBP10.48□□□□□ -0.73
PTPN20-220ENST00000508715 BCLAF3A2AJT9 711 aaKnown RBP10.48□□□□□ -0.73
PTPN20-220ENST00000508715 PPP1R12AO14974 1030 aaPredicted RBP10.48□□□□□ -0.73
PTPN20-220ENST00000508715 AXIN1O15169 862 aa10.48□□□□□ -0.73
PTPN20-220ENST00000508715 ALOX15BO15296 676 aa10.48□□□□□ -0.73
PTPN20-220ENST00000508715 SPINT1O43278 529 aa10.48□□□□□ -0.73
PTPN20-220ENST00000508715 HRO43593 1189 aa10.48□□□□□ -0.73
PTPN20-220ENST00000508715 SYNCRIPO60506 623 aaKnown RBP10.48□□□□□ -0.73
PTPN20-220ENST00000508715 LILRB5O75023 590 aa10.48□□□□□ -0.73
PTPN20-220ENST00000508715 LEFTY1O75610 366 aa10.48□□□□□ -0.73
PTPN20-220ENST00000508715 PIGNO95427 931 aa10.48□□□□□ -0.73
PTPN20-220ENST00000508715 PRLRP16471 622 aa10.48□□□□□ -0.73
PTPN20-220ENST00000508715 MMP13P45452 471 aa10.48□□□□□ -0.73
PTPN20-220ENST00000508715 CSNK1DP48730 415 aa10.48□□□□□ -0.73
PTPN20-220ENST00000508715 NUBP1P53384 320 aa10.48□□□□□ -0.73
PTPN20-220ENST00000508715 RHOAP61586 193 aa10.48□□□□□ -0.73
PTPN20-220ENST00000508715 SNRPD1P62314 119 aaKnown RBP10.48□□□□□ -0.73
PTPN20-220ENST00000508715 DSC2Q02487 901 aa10.48□□□□□ -0.73
PTPN20-220ENST00000508715 NSUN2Q08J23 767 aaKnown RBP eCLIP10.48□□□□□ -0.73
PTPN20-220ENST00000508715 E2F5Q15329 346 aa10.48□□□□□ -0.73
PTPN20-220ENST00000508715 CST6Q15828 149 aa10.48□□□□□ -0.73
PTPN20-220ENST00000508715 ZNF528Q3MIS6 628 aa10.48□□□□□ -0.73
PTPN20-220ENST00000508715 POM121L1PQ3SYA9 428 aa10.48□□□□□ -0.73
PTPN20-220ENST00000508715 TEX44Q53QW1 395 aa10.48□□□□□ -0.73
PTPN20-220ENST00000508715 MARC1Q5VT66 337 aa10.48□□□□□ -0.73
PTPN20-220ENST00000508715 NCEH1Q6PIU2 408 aa10.48□□□□□ -0.73
PTPN20-220ENST00000508715 SYT10Q6XYQ8 523 aa10.48□□□□□ -0.73
PTPN20-220ENST00000508715 SRLQ86TD4 932 aa10.48□□□□□ -0.73
PTPN20-220ENST00000508715 PRUNE1Q86TP1 453 aa10.48□□□□□ -0.73
PTPN20-220ENST00000508715 METTL3Q86U44 580 aaKnown RBP10.48□□□□□ -0.73
PTPN20-220ENST00000508715 WDR5BQ86VZ2 330 aa10.48□□□□□ -0.73
PTPN20-220ENST00000508715 CAMK1DQ8IU85 385 aa10.48□□□□□ -0.73
PTPN20-220ENST00000508715 CREG2Q8IUH2 290 aa10.48□□□□□ -0.73
PTPN20-220ENST00000508715 ZNF567Q8N184 647 aa10.48□□□□□ -0.73
PTPN20-220ENST00000508715 GLIS1Q8NBF1 620 aa10.48□□□□□ -0.73
PTPN20-220ENST00000508715 ZBTB44Q8NCP5 570 aa10.48□□□□□ -0.73
PTPN20-220ENST00000508715 PIP4K2CQ8TBX8 421 aa10.48□□□□□ -0.73
PTPN20-220ENST00000508715 GRIN3AQ8TCU5 1115 aa10.48□□□□□ -0.73
PTPN20-220ENST00000508715 TFB1MQ8WVM0 346 aaKnown RBP10.48□□□□□ -0.73
PTPN20-220ENST00000508715 C1orf54Q8WWF1 131 aa10.48□□□□□ -0.73
PTPN20-220ENST00000508715 OR8D1Q8WZ84 308 aa10.48□□□□□ -0.73
PTPN20-220ENST00000508715 TADA1Q96BN2 335 aa10.48□□□□□ -0.73
PTPN20-220ENST00000508715 TEKT5Q96M29 485 aa10.48□□□□□ -0.73
PTPN20-220ENST00000508715 NAPGQ99747 312 aaPredicted RBP10.48□□□□□ -0.73
PTPN20-220ENST00000508715 HEPHQ9BQS7 1158 aa10.48□□□□□ -0.73
PTPN20-220ENST00000508715 CINPQ9BW66 212 aaPredicted RBP10.48□□□□□ -0.73
PTPN20-220ENST00000508715 BRD8Q9H0E9 1235 aa10.48□□□□□ -0.73
PTPN20-220ENST00000508715 PABPC3Q9H361 631 aaKnown RBP10.48□□□□□ -0.73
PTPN20-220ENST00000508715 NOD2Q9HC29 1040 aa10.48□□□□□ -0.73
PTPN20-220ENST00000508715 NT5MQ9NPB1 228 aa10.48□□□□□ -0.73
PTPN20-220ENST00000508715 ITM2CQ9NQX7 267 aa10.48□□□□□ -0.73
PTPN20-220ENST00000508715 RAPGEFL1Q9UHV5 662 aa10.48□□□□□ -0.73
PTPN20-220ENST00000508715 INVSQ9Y283 1065 aa10.48□□□□□ -0.73
PTPN20-220ENST00000508715 SCN8AQ9UQD0 1980 aa10.48□□□□□ -0.73
PTPN20-220ENST00000508715 CABIN1Q9Y6J0 2220 aa10.48□□□□□ -0.73
PTPN20-220ENST00000508715 IGHV1OR15-9A0A0B4J2B8 117 aa10.47□□□□□ -0.73
PTPN20-220ENST00000508715 CCDC163A0A0D9SF12 145 aa10.47□□□□□ -0.73
PTPN20-220ENST00000508715 HACD1B0YJ81 288 aa10.47□□□□□ -0.73
PTPN20-220ENST00000508715 H0Y858 1186 aa10.47□□□□□ -0.73
PTPN20-220ENST00000508715 H7C0C1 242 aa10.47□□□□□ -0.73
PTPN20-220ENST00000508715 KRIT1O00522 736 aa10.47□□□□□ -0.73
PTPN20-220ENST00000508715 CES2O00748 559 aa10.47□□□□□ -0.73
PTPN20-220ENST00000508715 TRAFD1O14545 582 aaPredicted RBP10.47□□□□□ -0.73
PTPN20-220ENST00000508715 ZBTB24O43167 697 aaPredicted RBP10.47□□□□□ -0.73
PTPN20-220ENST00000508715 LIASO43766 372 aa10.47□□□□□ -0.73
PTPN20-220ENST00000508715 POP4O95707 220 aaKnown RBP10.47□□□□□ -0.73
PTPN20-220ENST00000508715 IGLV3-19P01714 112 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms