RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 SMAD1Q15797 465 aaKnown RBP16.53■□□□□ 0.24
SCLT1-204ENST00000503215 INAVAQ3KP66 663 aa16.53■□□□□ 0.24
SCLT1-204ENST00000503215 GCNT7Q6ZNI0 430 aa16.53■□□□□ 0.24
SCLT1-204ENST00000503215 PROSER1Q86XN7 944 aa16.53■□□□□ 0.24
SCLT1-204ENST00000503215 SLC22A18ASQ8N1D0 253 aa16.53■□□□□ 0.24
SCLT1-204ENST00000503215 ARFGAP1Q8N6T3 406 aa16.53■□□□□ 0.24
SCLT1-204ENST00000503215 RTL3Q8N8U3 475 aaKnown RBP16.53■□□□□ 0.24
SCLT1-204ENST00000503215 TSC1Q92574 1164 aa16.53■□□□□ 0.24
SCLT1-204ENST00000503215 ISG20Q96AZ6 181 aaKnown RBP16.53■□□□□ 0.24
SCLT1-204ENST00000503215 BMFQ96LC9 184 aa16.53■□□□□ 0.24
SCLT1-204ENST00000503215 FZD10Q9ULW2 581 aa16.53■□□□□ 0.24
SCLT1-204ENST00000503215 DSPP15924 2871 aaKnown RBP16.53■□□□□ 0.24
SCLT1-204ENST00000503215 CELSR3Q9NYQ7 3312 aa16.53■□□□□ 0.24
SCLT1-204ENST00000503215 ANKRD11Q6UB99 2663 aaPredicted RBP16.53■□□□□ 0.24
SCLT1-204ENST00000503215 ACACAQ13085 2346 aa16.53■□□□□ 0.24
SCLT1-204ENST00000503215 POM121BA6NF01 834 aa16.52■□□□□ 0.24
SCLT1-204ENST00000503215 TRABD2BA6NFA1 517 aa16.52■□□□□ 0.24
SCLT1-204ENST00000503215 LRRC53A6NM62 1247 aa16.52■□□□□ 0.24
SCLT1-204ENST00000503215 C16orf96A6NNT2 1141 aa16.52■□□□□ 0.24
SCLT1-204ENST00000503215 KRIT1O00522 736 aa16.52■□□□□ 0.24
SCLT1-204ENST00000503215 YKT6O15498 198 aa16.52■□□□□ 0.24
SCLT1-204ENST00000503215 BUB1O43683 1085 aa16.52■□□□□ 0.24
SCLT1-204ENST00000503215 CREB3O43889 395 aa16.52■□□□□ 0.24
SCLT1-204ENST00000503215 ITIH2P19823 946 aa16.52■□□□□ 0.24
SCLT1-204ENST00000503215 TNFAIP3P21580 790 aa16.52■□□□□ 0.24
SCLT1-204ENST00000503215 HNRNPA2B1P22626 353 aaKnown RBP16.52■□□□□ 0.24
SCLT1-204ENST00000503215 AKT2P31751 481 aa16.52■□□□□ 0.24
SCLT1-204ENST00000503215 ACADVLP49748 655 aa16.52■□□□□ 0.24
SCLT1-204ENST00000503215 CCDC15Q0P6D6 951 aa16.52■□□□□ 0.24
SCLT1-204ENST00000503215 MAMLD1Q13495 774 aa16.52■□□□□ 0.24
SCLT1-204ENST00000503215 MYLK3Q32MK0 819 aa16.52■□□□□ 0.24
SCLT1-204ENST00000503215 ZNF542PQ5EBM4 170 aa16.52■□□□□ 0.24
SCLT1-204ENST00000503215 EFHC2Q5JST6 749 aa16.52■□□□□ 0.24
SCLT1-204ENST00000503215 LRRC73Q5JTD7 316 aa16.52■□□□□ 0.24
SCLT1-204ENST00000503215 CAVIN1Q6NZI2 390 aaKnown RBP16.52■□□□□ 0.24
SCLT1-204ENST00000503215 FBXL19Q6PCT2 694 aa16.52■□□□□ 0.24
SCLT1-204ENST00000503215 HMCESQ96FZ2 354 aa16.52■□□□□ 0.24
SCLT1-204ENST00000503215 PPP1R16AQ96I34 528 aa16.52■□□□□ 0.24
SCLT1-204ENST00000503215 CNPY3Q9BT09 278 aa16.52■□□□□ 0.24
SCLT1-204ENST00000503215 TRIM7Q9C029 511 aa16.52■□□□□ 0.24
SCLT1-204ENST00000503215 TDRD6O60522 2096 aaKnown RBP16.52■□□□□ 0.23
SCLT1-204ENST00000503215 IGLON5A6NGN9 336 aa16.51■□□□□ 0.23
SCLT1-204ENST00000503215 INSIG1O15503 277 aa16.51■□□□□ 0.23
SCLT1-204ENST00000503215 TMCC1O94876 653 aa16.51■□□□□ 0.23
SCLT1-204ENST00000503215 UGT2B4P06133 528 aa16.51■□□□□ 0.23
SCLT1-204ENST00000503215 ETFBP38117 255 aa16.51■□□□□ 0.23
SCLT1-204ENST00000503215 CA9Q16790 459 aa16.51■□□□□ 0.23
SCLT1-204ENST00000503215 TPRG1LQ5T0D9 272 aa16.51■□□□□ 0.23
SCLT1-204ENST00000503215 DCUN1D2Q6PH85 259 aa16.51■□□□□ 0.23
SCLT1-204ENST00000503215 Q6ZSR6 202 aa16.51■□□□□ 0.23
SCLT1-204ENST00000503215 ZNF571Q7Z3V5 609 aaPredicted RBP16.51■□□□□ 0.23
SCLT1-204ENST00000503215 ABI3BPQ7Z7G0 1075 aa16.51■□□□□ 0.23
SCLT1-204ENST00000503215 ZNF354CQ86Y25 554 aa16.51■□□□□ 0.23
SCLT1-204ENST00000503215 PLPP6Q8IY26 295 aa16.51■□□□□ 0.23
SCLT1-204ENST00000503215 OR2AP1Q8NGE2 309 aa16.51■□□□□ 0.23
SCLT1-204ENST00000503215 KLF6Q99612 283 aaPredicted RBP16.51■□□□□ 0.23
SCLT1-204ENST00000503215 BPIFA3Q9BQP9 254 aa16.51■□□□□ 0.23
SCLT1-204ENST00000503215 CALN1Q9BXU9 219 aa16.51■□□□□ 0.23
SCLT1-204ENST00000503215 SLC17A9Q9BYT1 436 aa16.51■□□□□ 0.23
SCLT1-204ENST00000503215 CCDC86Q9H6F5 360 aaKnown RBP16.51■□□□□ 0.23
SCLT1-204ENST00000503215 RETREG1Q9H6L5 497 aa16.51■□□□□ 0.23
SCLT1-204ENST00000503215 KLHL11Q9NVR0 708 aa16.51■□□□□ 0.23
SCLT1-204ENST00000503215 HPCAL4Q9UM19 191 aa16.51■□□□□ 0.23
SCLT1-204ENST00000503215 COL5A1P20908 1838 aaPredicted RBP16.51■□□□□ 0.23
SCLT1-204ENST00000503215 RASA4BC9J798 803 aa16.51■□□□□ 0.23
SCLT1-204ENST00000503215 RASA4O43374 803 aa16.51■□□□□ 0.23
SCLT1-204ENST00000503215 SIGLEC6O43699 453 aa16.51■□□□□ 0.23
SCLT1-204ENST00000503215 MAGEC1O60732 1142 aa16.51■□□□□ 0.23
SCLT1-204ENST00000503215 GSRP00390 522 aa16.51■□□□□ 0.23
SCLT1-204ENST00000503215 GIMD1P0DJR0 217 aa16.51■□□□□ 0.23
SCLT1-204ENST00000503215 MYF5P13349 255 aa16.51■□□□□ 0.23
SCLT1-204ENST00000503215 DGKAP23743 735 aa16.51■□□□□ 0.23
SCLT1-204ENST00000503215 RPS21P63220 83 aaKnown RBP16.51■□□□□ 0.23
SCLT1-204ENST00000503215 CYP4F3Q08477 520 aa16.51■□□□□ 0.23
SCLT1-204ENST00000503215 ZNF805Q5CZA5 627 aa16.51■□□□□ 0.23
SCLT1-204ENST00000503215 TMC6Q7Z403 805 aa16.51■□□□□ 0.23
SCLT1-204ENST00000503215 GALNT15Q8N3T1 639 aa16.51■□□□□ 0.23
SCLT1-204ENST00000503215 OXR1Q8N573 874 aa16.51■□□□□ 0.23
SCLT1-204ENST00000503215 FEM1CQ96JP0 617 aa16.51■□□□□ 0.23
SCLT1-204ENST00000503215 KLHL32Q96NJ5 620 aa16.51■□□□□ 0.23
SCLT1-204ENST00000503215 PEBP4Q96S96 227 aa16.51■□□□□ 0.23
SCLT1-204ENST00000503215 FUCA2Q9BTY2 467 aa16.51■□□□□ 0.23
SCLT1-204ENST00000503215 NAT10Q9H0A0 1025 aaKnown RBP16.51■□□□□ 0.23
SCLT1-204ENST00000503215 HAUS4Q9H6D7 363 aa16.51■□□□□ 0.23
SCLT1-204ENST00000503215 FAM208BQ5VWN6 2430 aa16.5■□□□□ 0.23
SCLT1-204ENST00000503215 DDX3XO00571 662 aaKnown RBP eCLIP16.5■□□□□ 0.232e-13■■□□□ 13
SCLT1-204ENST00000503215 FFAR2O15552 330 aa16.5■□□□□ 0.23
SCLT1-204ENST00000503215 AP1G1O43747 822 aa16.5■□□□□ 0.23
SCLT1-204ENST00000503215 RFPL3O75679 317 aa16.5■□□□□ 0.23
SCLT1-204ENST00000503215 POP4O95707 220 aaKnown RBP16.5■□□□□ 0.23
SCLT1-204ENST00000503215 SKILP12757 684 aa16.5■□□□□ 0.23
SCLT1-204ENST00000503215 ZNF165P49910 485 aa16.5■□□□□ 0.23
SCLT1-204ENST00000503215 SNRPD1P62314 119 aaKnown RBP16.5■□□□□ 0.23
SCLT1-204ENST00000503215 SERINC3Q13530 473 aa16.5■□□□□ 0.23
SCLT1-204ENST00000503215 IQCB1Q15051 598 aa16.5■□□□□ 0.23
SCLT1-204ENST00000503215 CYTH1Q15438 398 aa16.5■□□□□ 0.23
SCLT1-204ENST00000503215 ASIC2Q16515 512 aa16.5■□□□□ 0.23
SCLT1-204ENST00000503215 PROX2Q3B8N5 592 aa16.5■□□□□ 0.23
SCLT1-204ENST00000503215 PLEKHA7Q6IQ23 1121 aa16.5■□□□□ 0.23
SCLT1-204ENST00000503215 C19orf48Q6RUI8 117 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms