RNA–Protein interactions for RNA: ENST00000496840.1

TARDBP-210, Transcript of TAR DNA binding protein, human

TSL 3

Gene TARDBP, Length 692 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-210	ENST00000496840	FAM167B	Q9BTA0	163 aa		6.25	□□□□□ -1.41
TARDBP-210	ENST00000496840	NPFFR1	Q9GZQ6	430 aa		6.25	□□□□□ -1.41
TARDBP-210	ENST00000496840	TLR8	Q9NR97	1041 aa	Known RBP	6.25	□□□□□ -1.41
TARDBP-210	ENST00000496840	PCDHGB1	Q9Y5G3	927 aa		6.25	□□□□□ -1.41
TARDBP-210	ENST00000496840	STX16-NPEPL1	H3BU86	382 aa		6.24	□□□□□ -1.41
TARDBP-210	ENST00000496840	STX16	O14662	325 aa		6.24	□□□□□ -1.41
TARDBP-210	ENST00000496840	DHX16	O60231	1041 aa	Known RBP	6.24	□□□□□ -1.41
TARDBP-210	ENST00000496840	ZNF12	P17014	697 aa		6.24	□□□□□ -1.41
TARDBP-210	ENST00000496840	HNF1B	P35680	557 aa		6.24	□□□□□ -1.41
TARDBP-210	ENST00000496840	PTPN9	P43378	593 aa		6.24	□□□□□ -1.41
TARDBP-210	ENST00000496840	PDLIM4	P50479	330 aa		6.24	□□□□□ -1.41
TARDBP-210	ENST00000496840	KRTAP10-7	P60409	375 aa	Predicted RBP	6.24	□□□□□ -1.41
TARDBP-210	ENST00000496840	MYBPC2	Q14324	1141 aa		6.24	□□□□□ -1.41
TARDBP-210	ENST00000496840	SH2D4B	Q5SQS7	431 aa		6.24	□□□□□ -1.41
TARDBP-210	ENST00000496840	C9orf57	Q5W0N0	161 aa		6.24	□□□□□ -1.41
TARDBP-210	ENST00000496840	C16orf82	Q7Z2V1	217 aa		6.24	□□□□□ -1.41
TARDBP-210	ENST00000496840	NEXN-AS1	Q8NBZ9	246 aa		6.24	□□□□□ -1.41
TARDBP-210	ENST00000496840	TBC1D22A	Q8WUA7	517 aa		6.24	□□□□□ -1.41
TARDBP-210	ENST00000496840	SH3KBP1	Q96B97	665 aa		6.24	□□□□□ -1.41
TARDBP-210	ENST00000496840	RNFT2	Q96EX2	444 aa		6.24	□□□□□ -1.41
TARDBP-210	ENST00000496840	SLC25A33	Q9BSK2	321 aa		6.24	□□□□□ -1.41
TARDBP-210	ENST00000496840	MSTO1	Q9BUK6	570 aa		6.24	□□□□□ -1.41
TARDBP-210	ENST00000496840	MVB12B	Q9H7P6	319 aa		6.24	□□□□□ -1.41
TARDBP-210	ENST00000496840	WDR6	Q9NNW5	1121 aa	Known RBP	6.24	□□□□□ -1.41
TARDBP-210	ENST00000496840	FEM1B	Q9UK73	627 aa		6.24	□□□□□ -1.41
TARDBP-210	ENST00000496840		A0A1B0GUV1	79 aa		6.23	□□□□□ -1.41
TARDBP-210	ENST00000496840		B9A039	149 aa		6.23	□□□□□ -1.41
TARDBP-210	ENST00000496840	CKMT1A	P12532	417 aa		6.23	□□□□□ -1.41
TARDBP-210	ENST00000496840	CENPA	P49450	140 aa		6.23	□□□□□ -1.41
TARDBP-210	ENST00000496840	RPL36A	P83881	106 aa	Known RBP	6.23	□□□□□ -1.41
TARDBP-210	ENST00000496840	SLC18A2	Q05940	514 aa		6.23	□□□□□ -1.41
TARDBP-210	ENST00000496840	FAM27E3	Q08E93	113 aa		6.23	□□□□□ -1.41
TARDBP-210	ENST00000496840	ST3GAL1	Q11201	340 aa		6.23	□□□□□ -1.41
TARDBP-210	ENST00000496840	ME3	Q16798	604 aa		6.23	□□□□□ -1.41
TARDBP-210	ENST00000496840	IZUMO4	Q1ZYL8	232 aa		6.23	□□□□□ -1.41
TARDBP-210	ENST00000496840	DCAF6	Q58WW2	860 aa		6.23	□□□□□ -1.41
TARDBP-210	ENST00000496840	PRSS57	Q6UWY2	283 aa		6.23	□□□□□ -1.41
TARDBP-210	ENST00000496840	TCP11L2	Q8N4U5	519 aa		6.23	□□□□□ -1.41
TARDBP-210	ENST00000496840	RTP4	Q96DX8	246 aa		6.23	□□□□□ -1.41
TARDBP-210	ENST00000496840	TTC12	Q9H892	705 aa	Predicted RBP	6.23	□□□□□ -1.41
TARDBP-210	ENST00000496840	CNPY2	Q9Y2B0	182 aa		6.23	□□□□□ -1.41
TARDBP-210	ENST00000496840	DNAJC16	Q9Y2G8	782 aa		6.23	□□□□□ -1.41
TARDBP-210	ENST00000496840	CHL1	O00533	1208 aa		6.22	□□□□□ -1.41
TARDBP-210	ENST00000496840	SERPINI2	O75830	405 aa		6.22	□□□□□ -1.41
TARDBP-210	ENST00000496840	ADA	P00813	363 aa		6.22	□□□□□ -1.41
TARDBP-210	ENST00000496840	CTPS1	P17812	591 aa		6.22	□□□□□ -1.41
TARDBP-210	ENST00000496840	MT3	P25713	68 aa		6.22	□□□□□ -1.41
TARDBP-210	ENST00000496840	ITGB8	P26012	769 aa		6.22	□□□□□ -1.41
TARDBP-210	ENST00000496840	EFR3A	Q14156	821 aa		6.22	□□□□□ -1.41
TARDBP-210	ENST00000496840	CTTN	Q14247	550 aa	Known RBP	6.22	□□□□□ -1.41
TARDBP-210	ENST00000496840	C10orf62	Q5T681	223 aa	Predicted RBP	6.22	□□□□□ -1.41
TARDBP-210	ENST00000496840	ARMC9	Q7Z3E5	817 aa		6.22	□□□□□ -1.41
TARDBP-210	ENST00000496840	HERC6	Q8IVU3	1022 aa		6.22	□□□□□ -1.41
TARDBP-210	ENST00000496840	FTSJ3	Q8IY81	847 aa	Known RBP	6.22	□□□□□ -1.41
TARDBP-210	ENST00000496840	TMEM170A	Q8WVE7	144 aa		6.22	□□□□□ -1.41
TARDBP-210	ENST00000496840	RILPL2	Q969X0	211 aa		6.22	□□□□□ -1.41
TARDBP-210	ENST00000496840	FIZ1	Q96SL8	496 aa		6.22	□□□□□ -1.41
TARDBP-210	ENST00000496840	ENTPD7	Q9NQZ7	604 aa		6.22	□□□□□ -1.41
TARDBP-210	ENST00000496840	GDA	Q9Y2T3	454 aa		6.22	□□□□□ -1.41
TARDBP-210	ENST00000496840	RRP7A	Q9Y3A4	280 aa	Known RBP	6.22	□□□□□ -1.41
TARDBP-210	ENST00000496840	IGLV5-52	A0A0A0MRZ9	124 aa		6.21	□□□□□ -1.42
TARDBP-210	ENST00000496840		A0A1B0GVM2	712 aa		6.21	□□□□□ -1.42
TARDBP-210	ENST00000496840	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	6.21	□□□□□ -1.42
TARDBP-210	ENST00000496840	KDM4E	B2RXH2	506 aa	Predicted RBP	6.21	□□□□□ -1.42
TARDBP-210	ENST00000496840	IRAK2	O43187	625 aa		6.21	□□□□□ -1.42
TARDBP-210	ENST00000496840	ZBTB11	O95625	1053 aa	Predicted RBP	6.21	□□□□□ -1.42
TARDBP-210	ENST00000496840	DHRS4L1	P0CG22	281 aa		6.21	□□□□□ -1.42
TARDBP-210	ENST00000496840	MYF6	P23409	242 aa		6.21	□□□□□ -1.42
TARDBP-210	ENST00000496840	C21orf33	P30042	268 aa	Predicted RBP	6.21	□□□□□ -1.42
TARDBP-210	ENST00000496840	TRAPPC10	P48553	1259 aa		6.21	□□□□□ -1.42
TARDBP-210	ENST00000496840	MXI1	P50539	228 aa		6.21	□□□□□ -1.42
TARDBP-210	ENST00000496840	ARSF	P54793	590 aa		6.21	□□□□□ -1.42
TARDBP-210	ENST00000496840	BNC1	Q01954	994 aa		6.21	□□□□□ -1.42
TARDBP-210	ENST00000496840	ANO1	Q5XXA6	986 aa		6.21	□□□□□ -1.42
TARDBP-210	ENST00000496840	NAPEPLD	Q6IQ20	393 aa		6.21	□□□□□ -1.42
TARDBP-210	ENST00000496840	H1FNT	Q75WM6	255 aa	Predicted RBP	6.21	□□□□□ -1.42
TARDBP-210	ENST00000496840	GHDC	Q8N2G8	530 aa		6.21	□□□□□ -1.42
TARDBP-210	ENST00000496840	USP38	Q8NB14	1042 aa		6.21	□□□□□ -1.42
TARDBP-210	ENST00000496840	GPT2	Q8TD30	523 aa		6.21	□□□□□ -1.42
TARDBP-210	ENST00000496840	TMED6	Q8WW62	240 aa		6.21	□□□□□ -1.42
TARDBP-210	ENST00000496840	RPS6KC1	Q96S38	1066 aa		6.21	□□□□□ -1.42
TARDBP-210	ENST00000496840	ZNF556	Q9HAH1	456 aa		6.21	□□□□□ -1.42
TARDBP-210	ENST00000496840	CLK4	Q9HAZ1	481 aa	Known RBP	6.21	□□□□□ -1.42
TARDBP-210	ENST00000496840	NOD2	Q9HC29	1040 aa		6.21	□□□□□ -1.42
TARDBP-210	ENST00000496840	SUFU	Q9UMX1	484 aa		6.21	□□□□□ -1.42
TARDBP-210	ENST00000496840	COMMD10	Q9Y6G5	202 aa		6.21	□□□□□ -1.42
TARDBP-210	ENST00000496840	SMTNL1	A8MU46	457 aa		6.2	□□□□□ -1.42
TARDBP-210	ENST00000496840	KRT86	O43790	486 aa		6.2	□□□□□ -1.42
TARDBP-210	ENST00000496840	CNP	P09543	421 aa	Known RBP	6.2	□□□□□ -1.42
TARDBP-210	ENST00000496840	ARL4C	P56559	192 aa		6.2	□□□□□ -1.42
TARDBP-210	ENST00000496840	TUBA1B	P68363	451 aa		6.2	□□□□□ -1.42
TARDBP-210	ENST00000496840	KRT81	Q14533	505 aa		6.2	□□□□□ -1.42
TARDBP-210	ENST00000496840	LPIN1	Q14693	890 aa		6.2	□□□□□ -1.42
TARDBP-210	ENST00000496840	SLC18A3	Q16572	532 aa		6.2	□□□□□ -1.42
TARDBP-210	ENST00000496840	PLEKHO1	Q53GL0	409 aa	Predicted RBP	6.2	□□□□□ -1.42
TARDBP-210	ENST00000496840	SPSB3	Q6PJ21	355 aa		6.2	□□□□□ -1.42
TARDBP-210	ENST00000496840		Q6ZTC4	211 aa		6.2	□□□□□ -1.42
TARDBP-210	ENST00000496840	CEP70	Q8NHQ1	597 aa		6.2	□□□□□ -1.42
TARDBP-210	ENST00000496840	HSPH1	Q92598	858 aa		6.2	□□□□□ -1.42
TARDBP-210	ENST00000496840	RNF183	Q96D59	192 aa		6.2	□□□□□ -1.42

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