RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 HESX1Q9UBX0 185 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 AFF4Q9UHB7 1163 aaKnown RBP4.95□□□□□ -1.62
RTN4-215ENST00000491592 RSPH14Q9UHP6 348 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 ANAPC5Q9UJX4 755 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 FEM1BQ9UK73 627 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 NEU2Q9Y3R4 380 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 SESN1Q9Y6P5 492 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 CRB1P82279 1406 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 ERCC6L2Q5T890 1561 aa4.95□□□□□ -1.62
RTN4-215ENST00000491592 XRN1Q8IZH2 1706 aaKnown RBP4.94□□□□□ -1.62
RTN4-215ENST00000491592 MYH15Q9Y2K3 1946 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 CYP2D7A0A087X1C5 515 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 PNMA6EA0A0J9YXQ4 647 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 RNF103-CHMP3A0A140T963 221 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 A0A1W2PS29 197 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 ARHGAP10A1A4S6 786 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 RGSL1A5PLK6 1076 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 UNC119BA6NIH7 251 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 USP27XA6NNY8 438 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 K7EPI3 171 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 RNF103O00237 685 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 BTN3A1O00481 513 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 PGRMC2O15173 223 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 VPS4BO75351 444 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 ERLIN1O75477 346 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 FAM155BO75949 473 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 SUN1O94901 812 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 TRIM16O95361 564 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 LARGE1O95461 756 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 YEATS4O95619 227 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 MLYCDO95822 493 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 PAHP00439 452 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 HNRNPA1P09651 372 aaKnown RBP eCLIP4.94□□□□□ -1.62
RTN4-215ENST00000491592 C6P13671 934 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 KELP23276 732 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 TBXAS1P24557 533 aaPredicted RBP4.94□□□□□ -1.62
RTN4-215ENST00000491592 ACSL1P33121 698 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 BMPR1AP36894 532 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 DPP6P42658 865 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 SLC11A2P49281 568 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 HNMTP50135 292 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 ETV1P50549 477 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 ANXA11P50995 505 aaKnown RBP4.94□□□□□ -1.62
RTN4-215ENST00000491592 SLC12A3P55017 1021 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 SUMO3P55854 103 aaPredicted RBP4.94□□□□□ -1.62
RTN4-215ENST00000491592 COG7P83436 770 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 KRT17Q04695 432 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 NSUN2Q08J23 767 aaKnown RBP eCLIP4.94□□□□□ -1.62
RTN4-215ENST00000491592 RALGDSQ12967 914 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 RESTQ13127 1097 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 SGCGQ13326 291 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 CYP2A13Q16696 494 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 C15orf59Q2T9L4 293 aaPredicted RBP4.94□□□□□ -1.62
RTN4-215ENST00000491592 SPDYE7PQ495Y7 208 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 PREPLQ4J6C6 727 aaPredicted RBP4.94□□□□□ -1.62
RTN4-215ENST00000491592 TIGD2Q4W5G0 525 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 XKR9Q5GH70 373 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 SLC30A9Q6PML9 568 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 SYT10Q6XYQ8 523 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 C15orf52Q6ZUT6 534 aaKnown RBP4.94□□□□□ -1.62
RTN4-215ENST00000491592 RHOUQ7L0Q8 258 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 SZRD1Q7Z422 152 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 CLNKQ7Z7G1 428 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 UNC5CLQ8IV45 518 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 DHX40Q8IX18 779 aaKnown RBP4.94□□□□□ -1.62
RTN4-215ENST00000491592 CCDC13Q8IYE1 715 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 HDDC3Q8N4P3 179 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 Q8NA96 180 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 RFWD2Q8NHY2 731 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 CEP76Q8TAP6 659 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 STT3BQ8TCJ2 826 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 THAP4Q8WY91 577 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 CASP10Q92851 521 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 MAP4K1Q92918 833 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 GTF3C6Q969F1 213 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 FAM162AQ96A26 154 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 TMEM125Q96AQ2 219 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 LENG9Q96B70 501 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 VPS50Q96JG6 964 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 PGBD1Q96JS3 809 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 DACH2Q96NX9 599 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 RAB3IPQ96QF0 476 aaPredicted RBP4.94□□□□□ -1.62
RTN4-215ENST00000491592 TXN2Q99757 166 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 ZPBPQ9BS86 351 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 TBCDQ9BTW9 1192 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 THUMPD3Q9BV44 507 aaKnown RBP4.94□□□□□ -1.62
RTN4-215ENST00000491592 SPATA5L1Q9BVQ7 753 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 SMURF2Q9HAU4 748 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 PDE11AQ9HCR9 933 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 TRPV5Q9NQA5 729 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 SERHLQ9NQF3 203 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 SLC35C2Q9NQQ7 365 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 SEPT11Q9NVA2 429 aaKnown RBP4.94□□□□□ -1.62
RTN4-215ENST00000491592 PTBP2Q9UKA9 531 aaKnown RBP4.94□□□□□ -1.62
RTN4-215ENST00000491592 FZD1Q9UP38 647 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 EXOC7Q9UPT5 735 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 CAMK2AQ9UQM7 478 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 REXO2Q9Y3B8 237 aaKnown RBP4.94□□□□□ -1.62
RTN4-215ENST00000491592 POGZQ7Z3K3 1410 aa4.94□□□□□ -1.62
RTN4-215ENST00000491592 TSPOAP1O95153 1857 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms