RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 BYSLQ13895 437 aaKnown RBP13.16□□□□□ -0.3
SSR4-211ENST00000486204 DLG2Q15700 870 aa13.16□□□□□ -0.3
SSR4-211ENST00000486204 LRRC38Q5VT99 294 aa13.16□□□□□ -0.3
SSR4-211ENST00000486204 C22orf39Q6P5X5 142 aa13.16□□□□□ -0.3
SSR4-211ENST00000486204 Q6ZVU0 165 aa13.16□□□□□ -0.3
SSR4-211ENST00000486204 METTL3Q86U44 580 aaKnown RBP13.16□□□□□ -0.3
SSR4-211ENST00000486204 TMPRSS6Q8IU80 811 aa13.16□□□□□ -0.3
SSR4-211ENST00000486204 TP53INP2Q8IXH6 220 aa13.16□□□□□ -0.3
SSR4-211ENST00000486204 CCDC112Q8NEF3 446 aa13.16□□□□□ -0.3
SSR4-211ENST00000486204 PCDH19Q8TAB3 1148 aa13.16□□□□□ -0.3
SSR4-211ENST00000486204 RAPGEF5Q92565 580 aa13.16□□□□□ -0.3
SSR4-211ENST00000486204 CELF6Q96J87 481 aaKnown RBP13.16□□□□□ -0.3
SSR4-211ENST00000486204 PDLIM2Q96JY6 352 aa13.16□□□□□ -0.3
SSR4-211ENST00000486204 FAM129BQ96TA1 746 aa13.16□□□□□ -0.3
SSR4-211ENST00000486204 ZNF670Q9BS34 389 aa13.16□□□□□ -0.3
SSR4-211ENST00000486204 SLC39A8Q9C0K1 460 aa13.16□□□□□ -0.3
SSR4-211ENST00000486204 RSPH9Q9H1X1 276 aaPredicted RBP13.16□□□□□ -0.3
SSR4-211ENST00000486204 FBRSQ9HAH7 460 aa13.16□□□□□ -0.3
SSR4-211ENST00000486204 PRDM16Q9HAZ2 1276 aa13.16□□□□□ -0.3
SSR4-211ENST00000486204 USP36Q9P275 1121 aaKnown RBP13.16□□□□□ -0.3
SSR4-211ENST00000486204 BCCIPQ9P287 314 aaKnown RBP eCLIP13.16□□□□□ -0.3
SSR4-211ENST00000486204 SUN2Q9UH99 717 aa13.16□□□□□ -0.3
SSR4-211ENST00000486204 APOBEC2Q9Y235 224 aaKnown RBP13.16□□□□□ -0.3
SSR4-211ENST00000486204 ADGRG1Q9Y653 693 aa13.16□□□□□ -0.3
SSR4-211ENST00000486204 ALG6Q9Y672 507 aa13.16□□□□□ -0.3
SSR4-211ENST00000486204 TMEM131Q92545 1883 aa13.16□□□□□ -0.3
SSR4-211ENST00000486204 A0A087WV48 116 aa13.15□□□□□ -0.3
SSR4-211ENST00000486204 ATXN7O15265 892 aaPredicted RBP13.15□□□□□ -0.3
SSR4-211ENST00000486204 DAPK3O43293 454 aa13.15□□□□□ -0.3
SSR4-211ENST00000486204 BUB1O43683 1085 aa13.15□□□□□ -0.3
SSR4-211ENST00000486204 SYPP08247 313 aa13.15□□□□□ -0.3
SSR4-211ENST00000486204 KDELR1P24390 212 aa13.15□□□□□ -0.3
SSR4-211ENST00000486204 NNMTP40261 264 aa13.15□□□□□ -0.3
SSR4-211ENST00000486204 MARCKSL1P49006 195 aa13.15□□□□□ -0.3
SSR4-211ENST00000486204 CLCN6P51797 869 aa13.15□□□□□ -0.3
SSR4-211ENST00000486204 RPS14P62263 151 aaKnown RBP13.15□□□□□ -0.3
SSR4-211ENST00000486204 CYP4F3Q08477 520 aa13.15□□□□□ -0.3
SSR4-211ENST00000486204 SLC14A1Q13336 389 aa13.15□□□□□ -0.3
SSR4-211ENST00000486204 KRT81Q14533 505 aa13.15□□□□□ -0.3
SSR4-211ENST00000486204 PDK2Q15119 407 aa13.15□□□□□ -0.3
SSR4-211ENST00000486204 NCBP2-AS2Q69YL0 99 aa13.15□□□□□ -0.3
SSR4-211ENST00000486204 RETSATQ6NUM9 610 aa13.15□□□□□ -0.3
SSR4-211ENST00000486204 KIAA1324Q6UXG2 1013 aaKnown RBP13.15□□□□□ -0.3
SSR4-211ENST00000486204 KIAA1328Q86T90 577 aa13.15□□□□□ -0.3
SSR4-211ENST00000486204 SLCO6A1Q86UG4 719 aa13.15□□□□□ -0.3
SSR4-211ENST00000486204 CACUL1Q86Y37 369 aa13.15□□□□□ -0.3
SSR4-211ENST00000486204 RHOT1Q8IXI2 618 aa13.15□□□□□ -0.3
SSR4-211ENST00000486204 PGBD3Q8N328 593 aa13.15□□□□□ -0.3
SSR4-211ENST00000486204 LRRC57Q8N9N7 239 aa13.15□□□□□ -0.3
SSR4-211ENST00000486204 ATP11CQ8NB49 1132 aa13.15□□□□□ -0.3
SSR4-211ENST00000486204 VOPP1Q96AW1 172 aa13.15□□□□□ -0.3
SSR4-211ENST00000486204 PLXNB3Q9ULL4 1909 aa13.15□□□□□ -0.3
SSR4-211ENST00000486204 TRPM6Q9BX84 2022 aa13.15□□□□□ -0.3
SSR4-211ENST00000486204 IGHV1OR15-9A0A0B4J2B8 117 aa13.14□□□□□ -0.31
SSR4-211ENST00000486204 GRID2IPA4D2P6 1211 aa13.14□□□□□ -0.31
SSR4-211ENST00000486204 ZNF487B1APH4 448 aa13.14□□□□□ -0.31
SSR4-211ENST00000486204 PSTPIP1O43586 416 aa13.14□□□□□ -0.31
SSR4-211ENST00000486204 SPOPO43791 374 aa13.14□□□□□ -0.31
SSR4-211ENST00000486204 MFSD11O43934 449 aa13.14□□□□□ -0.31
SSR4-211ENST00000486204 IGLV3-19P01714 112 aa13.14□□□□□ -0.31
SSR4-211ENST00000486204 PAPOLAP51003 745 aaKnown RBP13.14□□□□□ -0.31
SSR4-211ENST00000486204 SLC20A2Q08357 652 aa13.14□□□□□ -0.31
SSR4-211ENST00000486204 ELAVL3Q14576 367 aaKnown RBP13.14□□□□□ -0.31
SSR4-211ENST00000486204 ANKRD20A8PQ5CZ79 823 aa13.14□□□□□ -0.31
SSR4-211ENST00000486204 ZNF776Q68DI1 518 aaPredicted RBP13.14□□□□□ -0.31
SSR4-211ENST00000486204 TMCO3Q6UWJ1 677 aa13.14□□□□□ -0.31
SSR4-211ENST00000486204 LEKR1Q6ZMV7 388 aa13.14□□□□□ -0.31
SSR4-211ENST00000486204 ARHGAP36Q6ZRI8 547 aa13.14□□□□□ -0.31
SSR4-211ENST00000486204 RABEPKQ7Z6M1 372 aa13.14□□□□□ -0.31
SSR4-211ENST00000486204 VSIG1Q86XK7 387 aa13.14□□□□□ -0.31
SSR4-211ENST00000486204 NAXDQ8IW45 347 aa13.14□□□□□ -0.31
SSR4-211ENST00000486204 STK40Q8N2I9 435 aa13.14□□□□□ -0.31
SSR4-211ENST00000486204 DEFB119Q8N690 84 aa13.14□□□□□ -0.31
SSR4-211ENST00000486204 PQLC3Q8N755 202 aa13.14□□□□□ -0.31
SSR4-211ENST00000486204 KCTD6Q8NC69 237 aa13.14□□□□□ -0.31
SSR4-211ENST00000486204 OR2A12Q8NGT7 310 aa13.14□□□□□ -0.31
SSR4-211ENST00000486204 PRCCQ92733 491 aaPredicted RBP13.14□□□□□ -0.31
SSR4-211ENST00000486204 SIPA1Q96FS4 1042 aa13.14□□□□□ -0.31
SSR4-211ENST00000486204 CALN1Q9BXU9 219 aa13.14□□□□□ -0.31
SSR4-211ENST00000486204 CEP44Q9C0F1 390 aa13.14□□□□□ -0.31
SSR4-211ENST00000486204 ITM2CQ9NQX7 267 aa13.14□□□□□ -0.31
SSR4-211ENST00000486204 DONSONQ9NYP3 566 aa13.14□□□□□ -0.31
SSR4-211ENST00000486204 FCF1Q9Y324 198 aaKnown RBP13.14□□□□□ -0.31
SSR4-211ENST00000486204 CAPN6Q9Y6Q1 641 aa13.14□□□□□ -0.31
SSR4-211ENST00000486204 PCDH15Q96QU1 1955 aa13.13□□□□□ -0.31
SSR4-211ENST00000486204 LRRD1A4D1F6 860 aa13.13□□□□□ -0.31
SSR4-211ENST00000486204 ZSCAN5CA6NGD5 496 aaPredicted RBP13.13□□□□□ -0.31
SSR4-211ENST00000486204 J3KR12 359 aa13.13□□□□□ -0.31
SSR4-211ENST00000486204 RNF103O00237 685 aa13.13□□□□□ -0.31
SSR4-211ENST00000486204 ALOX15BO15296 676 aa13.13□□□□□ -0.31
SSR4-211ENST00000486204 PRAMEF11O60813 436 aa13.13□□□□□ -0.31
SSR4-211ENST00000486204 KRT1P04264 644 aa13.13□□□□□ -0.31
SSR4-211ENST00000486204 CTSLP07711 333 aa13.13□□□□□ -0.31
SSR4-211ENST00000486204 TPMTP51580 245 aa13.13□□□□□ -0.31
SSR4-211ENST00000486204 METAP1P53582 386 aa13.13□□□□□ -0.31
SSR4-211ENST00000486204 GEMIN4P57678 1058 aaKnown RBP13.13□□□□□ -0.31
SSR4-211ENST00000486204 KIF5AQ12840 1032 aa13.13□□□□□ -0.31
SSR4-211ENST00000486204 PAFAH1B3Q15102 231 aaKnown RBP13.13□□□□□ -0.31
SSR4-211ENST00000486204 TAZQ16635 292 aa13.13□□□□□ -0.31
SSR4-211ENST00000486204 ACCSLQ4AC99 568 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms