RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 CLEC16AQ2KHT3 1053 aa11.65□□□□□ -0.54
SCFD1-206ENST00000484733 FAM72AQ5TYM5 149 aa11.65□□□□□ -0.54
SCFD1-206ENST00000484733 CDCP2Q5VXM1 449 aa11.65□□□□□ -0.54
SCFD1-206ENST00000484733 FAM72DQ6L9T8 149 aa11.65□□□□□ -0.54
SCFD1-206ENST00000484733 FAM72BQ86X60 149 aa11.65□□□□□ -0.54
SCFD1-206ENST00000484733 OR2AP1Q8NGE2 309 aa11.65□□□□□ -0.54
SCFD1-206ENST00000484733 SLC30A5Q8TAD4 765 aa11.65□□□□□ -0.54
SCFD1-206ENST00000484733 MYOCQ99972 504 aa11.65□□□□□ -0.54
SCFD1-206ENST00000484733 DUSP23Q9BVJ7 150 aa11.65□□□□□ -0.54
SCFD1-206ENST00000484733 CALN1Q9BXU9 219 aa11.65□□□□□ -0.54
SCFD1-206ENST00000484733 NLRC4Q9NPP4 1024 aa11.65□□□□□ -0.54
SCFD1-206ENST00000484733 FAM207AQ9NSI2 230 aaPredicted RBP11.65□□□□□ -0.54
SCFD1-206ENST00000484733 EVA1BQ9NVM1 165 aa11.65□□□□□ -0.54
SCFD1-206ENST00000484733 ADAM22Q9P0K1 906 aa11.65□□□□□ -0.54
SCFD1-206ENST00000484733 CLCA2Q9UQC9 943 aa11.65□□□□□ -0.54
SCFD1-206ENST00000484733 SPTY2D1-AS1A0A0U1RR47 76 aa11.65□□□□□ -0.54
SCFD1-206ENST00000484733 TCRBV5S1A1TA0A578 114 aa11.65□□□□□ -0.54
SCFD1-206ENST00000484733 LRRC10BA6NIK2 292 aa11.65□□□□□ -0.54
SCFD1-206ENST00000484733 SIGLEC16A6NMB1 481 aa11.65□□□□□ -0.54
SCFD1-206ENST00000484733 WASH4PA8MWX3 477 aa11.65□□□□□ -0.54
SCFD1-206ENST00000484733 LZTS3O60299 673 aaPredicted RBP11.65□□□□□ -0.54
SCFD1-206ENST00000484733 MT-CO3P00414 261 aa11.65□□□□□ -0.54
SCFD1-206ENST00000484733 GP1BAP07359 652 aa11.65□□□□□ -0.54
SCFD1-206ENST00000484733 GPD1P21695 349 aa11.65□□□□□ -0.54
SCFD1-206ENST00000484733 EIF2S3P41091 472 aaKnown RBP11.65□□□□□ -0.54
SCFD1-206ENST00000484733 DUSP3P51452 185 aaPredicted RBP11.65□□□□□ -0.54
SCFD1-206ENST00000484733 COPB1P53618 953 aaKnown RBP11.65□□□□□ -0.54
SCFD1-206ENST00000484733 DAB2P98082 770 aa11.65□□□□□ -0.54
SCFD1-206ENST00000484733 FZD2Q14332 565 aa11.65□□□□□ -0.54
SCFD1-206ENST00000484733 POLD3Q15054 466 aaPredicted RBP11.65□□□□□ -0.54
SCFD1-206ENST00000484733 MYLK3Q32MK0 819 aa11.65□□□□□ -0.54
SCFD1-206ENST00000484733 RWDD4Q6NW29 188 aaKnown RBP11.65□□□□□ -0.54
SCFD1-206ENST00000484733 C3orf20Q8ND61 904 aa11.65□□□□□ -0.54
SCFD1-206ENST00000484733 SNIP1Q8TAD8 396 aaKnown RBP11.65□□□□□ -0.54
SCFD1-206ENST00000484733 GPT2Q8TD30 523 aa11.65□□□□□ -0.54
SCFD1-206ENST00000484733 FAM172AQ8WUF8 416 aa11.65□□□□□ -0.54
SCFD1-206ENST00000484733 KLF6Q99612 283 aaPredicted RBP11.65□□□□□ -0.54
SCFD1-206ENST00000484733 ZDHHC6Q9H6R6 413 aa11.65□□□□□ -0.54
SCFD1-206ENST00000484733 FANCLQ9NW38 375 aa11.65□□□□□ -0.54
SCFD1-206ENST00000484733 ACTL7AQ9Y615 435 aa11.65□□□□□ -0.54
SCFD1-206ENST00000484733 TRPM6Q9BX84 2022 aa11.64□□□□□ -0.55
SCFD1-206ENST00000484733 TOR1BO14657 336 aa11.64□□□□□ -0.55
SCFD1-206ENST00000484733 FPGTO14772 594 aa11.64□□□□□ -0.55
SCFD1-206ENST00000484733 RAD51BO15315 384 aa11.64□□□□□ -0.55
SCFD1-206ENST00000484733 RAMP2O60895 175 aa11.64□□□□□ -0.55
SCFD1-206ENST00000484733 PAK4O96013 591 aaPredicted RBP11.64□□□□□ -0.55
SCFD1-206ENST00000484733 CSF2P04141 144 aa11.64□□□□□ -0.55
SCFD1-206ENST00000484733 RFC1P35251 1148 aaPredicted RBP11.64□□□□□ -0.55
SCFD1-206ENST00000484733 ABL2P42684 1182 aa11.64□□□□□ -0.55
SCFD1-206ENST00000484733 NSFP46459 744 aaKnown RBP11.64□□□□□ -0.55
SCFD1-206ENST00000484733 AIF1P55008 147 aa11.64□□□□□ -0.55
SCFD1-206ENST00000484733 YBEYP58557 167 aaPredicted RBP11.64□□□□□ -0.55
SCFD1-206ENST00000484733 C1QBPQ07021 282 aaKnown RBP11.64□□□□□ -0.55
SCFD1-206ENST00000484733 SGCGQ13326 291 aa11.64□□□□□ -0.55
SCFD1-206ENST00000484733 MAPK8IP2Q13387 824 aaPredicted RBP11.64□□□□□ -0.55
SCFD1-206ENST00000484733 INO80DQ53TQ3 878 aaPredicted RBP11.64□□□□□ -0.55
SCFD1-206ENST00000484733 WDR59Q6PJI9 974 aa11.64□□□□□ -0.55
SCFD1-206ENST00000484733 PTAR1Q7Z6K3 402 aaPredicted RBP11.64□□□□□ -0.55
SCFD1-206ENST00000484733 CCDC185Q8N715 623 aa11.64□□□□□ -0.55
SCFD1-206ENST00000484733 ARHGEF26Q96DR7 871 aa11.64□□□□□ -0.55
SCFD1-206ENST00000484733 TBATAQ96M53 351 aa11.64□□□□□ -0.55
SCFD1-206ENST00000484733 SELENOOQ9BVL4 669 aa11.64□□□□□ -0.55
SCFD1-206ENST00000484733 DNAI1Q9UI46 699 aa11.64□□□□□ -0.55
SCFD1-206ENST00000484733 MFHAS1Q9Y4C4 1052 aa11.64□□□□□ -0.55
SCFD1-206ENST00000484733 LY6G6EA0A0G2JKS1 128 aa11.64□□□□□ -0.55
SCFD1-206ENST00000484733 FAM170AA1A519 330 aa11.64□□□□□ -0.55
SCFD1-206ENST00000484733 POM121BA6NF01 834 aa11.64□□□□□ -0.55
SCFD1-206ENST00000484733 LGALS16A8MUM7 142 aa11.64□□□□□ -0.55
SCFD1-206ENST00000484733 AREL1O15033 823 aa11.64□□□□□ -0.55
SCFD1-206ENST00000484733 TLX3O43711 291 aaPredicted RBP11.64□□□□□ -0.55
SCFD1-206ENST00000484733 NME1P15531 152 aaKnown RBP11.64□□□□□ -0.55
SCFD1-206ENST00000484733 PFN3P60673 137 aa11.64□□□□□ -0.55
SCFD1-206ENST00000484733 MON1BQ7L1V2 547 aa11.64□□□□□ -0.55
SCFD1-206ENST00000484733 SLFN11Q7Z7L1 901 aa11.64□□□□□ -0.55
SCFD1-206ENST00000484733 PHLDB2Q86SQ0 1253 aa11.64□□□□□ -0.55
SCFD1-206ENST00000484733 RTL3Q8N8U3 475 aaKnown RBP11.64□□□□□ -0.55
SCFD1-206ENST00000484733 ANKRD20A12PQ8NF67 263 aa11.64□□□□□ -0.55
SCFD1-206ENST00000484733 NEK11Q8NG66 645 aa11.64□□□□□ -0.55
SCFD1-206ENST00000484733 ERGIC2Q96RQ1 377 aa11.64□□□□□ -0.55
SCFD1-206ENST00000484733 MAGEB5Q9BZ81 275 aa11.64□□□□□ -0.55
SCFD1-206ENST00000484733 TM6SF2Q9BZW4 377 aa11.64□□□□□ -0.55
SCFD1-206ENST00000484733 NOL6Q9H6R4 1146 aaKnown RBP11.64□□□□□ -0.55
SCFD1-206ENST00000484733 NCKIPSDQ9NZQ3 722 aa11.64□□□□□ -0.55
SCFD1-206ENST00000484733 DKK3Q9UBP4 350 aa11.64□□□□□ -0.55
SCFD1-206ENST00000484733 AK5Q9Y6K8 562 aa11.64□□□□□ -0.55
SCFD1-206ENST00000484733 U3KQA8 63 aa11.64□□□□□ -0.55
SCFD1-206ENST00000484733 CACNA1GO43497 2377 aa11.63□□□□□ -0.55
SCFD1-206ENST00000484733 IGLON5A6NGN9 336 aa11.63□□□□□ -0.55
SCFD1-206ENST00000484733 H3BM21 787 aa11.63□□□□□ -0.55
SCFD1-206ENST00000484733 SPINT1O43278 529 aa11.63□□□□□ -0.55
SCFD1-206ENST00000484733 OPA1O60313 960 aa11.63□□□□□ -0.55
SCFD1-206ENST00000484733 GJB6O95452 261 aa11.63□□□□□ -0.55
SCFD1-206ENST00000484733 ACTN2P35609 894 aa11.63□□□□□ -0.55
SCFD1-206ENST00000484733 ABCG1P45844 678 aa11.63□□□□□ -0.55
SCFD1-206ENST00000484733 ACAP1Q15027 740 aa11.63□□□□□ -0.55
SCFD1-206ENST00000484733 SYCP1Q15431 976 aa11.63□□□□□ -0.55
SCFD1-206ENST00000484733 PARGQ86W56 976 aa11.63□□□□□ -0.55
SCFD1-206ENST00000484733 HCAR2Q8TDS4 363 aa11.63□□□□□ -0.55
SCFD1-206ENST00000484733 APOLD1Q96LR9 279 aa11.63□□□□□ -0.55
SCFD1-206ENST00000484733 ANO10Q9NW15 660 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms