RNA–Protein interactions for RNA: ENST00000482582.5

TRAIP-208, Transcript of TRAF interacting protein, humanhuman

TSL 5

Gene TRAIP, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-208ENST00000482582 MKRN2Q9H000 416 aaKnown RBP11.97□□□□□ -0.49
TRAIP-208ENST00000482582 BRD8Q9H0E9 1235 aa11.97□□□□□ -0.49
TRAIP-208ENST00000482582 USP29Q9HBJ7 922 aa11.97□□□□□ -0.49
TRAIP-208ENST00000482582 NT5MQ9NPB1 228 aa11.97□□□□□ -0.49
TRAIP-208ENST00000482582 PARD6AQ9NPB6 346 aa11.97□□□□□ -0.49
TRAIP-208ENST00000482582 SPATA6Q9NWH7 488 aaPredicted RBP11.97□□□□□ -0.49
TRAIP-208ENST00000482582 SEPT10Q9P0V9 454 aa11.97□□□□□ -0.49
TRAIP-208ENST00000482582 TPRP12270 2363 aaKnown RBP11.97□□□□□ -0.49
TRAIP-208ENST00000482582 SDK1Q7Z5N4 2213 aa11.96□□□□□ -0.49
TRAIP-208ENST00000482582 ABCA7Q8IZY2 2146 aa11.96□□□□□ -0.49
TRAIP-208ENST00000482582 DOCK9Q9BZ29 2069 aa11.96□□□□□ -0.49
TRAIP-208ENST00000482582 TARSL2A2RTX5 802 aaKnown RBP11.96□□□□□ -0.49
TRAIP-208ENST00000482582 HACD1B0YJ81 288 aa11.96□□□□□ -0.49
TRAIP-208ENST00000482582 K7ESF4 209 aa11.96□□□□□ -0.49
TRAIP-208ENST00000482582 PGRMC1O00264 195 aaKnown RBP11.96□□□□□ -0.49
TRAIP-208ENST00000482582 LIASO43766 372 aa11.96□□□□□ -0.49
TRAIP-208ENST00000482582 HLA-DQB2P05538 268 aa11.96□□□□□ -0.49
TRAIP-208ENST00000482582 CTSLP07711 333 aa11.96□□□□□ -0.49
TRAIP-208ENST00000482582 GABRG2P18507 467 aa11.96□□□□□ -0.49
TRAIP-208ENST00000482582 PTPN3P26045 913 aa11.96□□□□□ -0.49
TRAIP-208ENST00000482582 MMP13P45452 471 aa11.96□□□□□ -0.49
TRAIP-208ENST00000482582 CXCL12P48061 93 aa11.96□□□□□ -0.49
TRAIP-208ENST00000482582 METAP1P53582 386 aa11.96□□□□□ -0.49
TRAIP-208ENST00000482582 MAXP61244 160 aa11.96□□□□□ -0.49
TRAIP-208ENST00000482582 RHOAP61586 193 aa11.96□□□□□ -0.49
TRAIP-208ENST00000482582 IFI35P80217 286 aaPredicted RBP11.96□□□□□ -0.49
TRAIP-208ENST00000482582 ZNF33AQ06730 810 aa11.96□□□□□ -0.49
TRAIP-208ENST00000482582 SNX1Q13596 522 aa11.96□□□□□ -0.49
TRAIP-208ENST00000482582 HNRNPDQ14103 355 aaKnown RBP11.96□□□□□ -0.49
TRAIP-208ENST00000482582 RFTN1Q14699 578 aaPredicted RBP11.96□□□□□ -0.49
TRAIP-208ENST00000482582 E2F5Q15329 346 aa11.96□□□□□ -0.49
TRAIP-208ENST00000482582 OASLQ15646 514 aaKnown RBP11.96□□□□□ -0.49
TRAIP-208ENST00000482582 KCTD19Q17RG1 926 aaPredicted RBP11.96□□□□□ -0.49
TRAIP-208ENST00000482582 CARD16Q5EG05 197 aa11.96□□□□□ -0.49
TRAIP-208ENST00000482582 MARC1Q5VT66 337 aa11.96□□□□□ -0.49
TRAIP-208ENST00000482582 TIGD7Q6NT04 549 aaPredicted RBP11.96□□□□□ -0.49
TRAIP-208ENST00000482582 DARS2Q6PI48 645 aaKnown RBP11.96□□□□□ -0.49
TRAIP-208ENST00000482582 PCDH20Q8N6Y1 951 aaKnown RBP11.96□□□□□ -0.49
TRAIP-208ENST00000482582 TTC13Q8NBP0 860 aa11.96□□□□□ -0.49
TRAIP-208ENST00000482582 OR6K2Q8NGY2 324 aa11.96□□□□□ -0.49
TRAIP-208ENST00000482582 RUBCNQ92622 972 aa11.96□□□□□ -0.49
TRAIP-208ENST00000482582 PSKH2Q96QS6 385 aa11.96□□□□□ -0.49
TRAIP-208ENST00000482582 CINPQ9BW66 212 aaPredicted RBP11.96□□□□□ -0.49
TRAIP-208ENST00000482582 RBM22Q9NW64 420 aaKnown RBP eCLIP11.96□□□□□ -0.49
TRAIP-208ENST00000482582 SEPT3Q9UH03 358 aa11.96□□□□□ -0.49
TRAIP-208ENST00000482582 EVLQ9UI08 416 aaPredicted RBP11.96□□□□□ -0.49
TRAIP-208ENST00000482582 SARDHQ9UL12 918 aa11.96□□□□□ -0.49
TRAIP-208ENST00000482582 TCRBV21S2A2A0A5A6 115 aa11.95□□□□□ -0.5
TRAIP-208ENST00000482582 BCLAF3A2AJT9 711 aaKnown RBP11.95□□□□□ -0.5
TRAIP-208ENST00000482582 DCDC2BA2VCK2 349 aa11.95□□□□□ -0.5
TRAIP-208ENST00000482582 MCF2LO15068 1137 aa11.95□□□□□ -0.5
TRAIP-208ENST00000482582 SYNCRIPO60506 623 aaKnown RBP11.95□□□□□ -0.5
TRAIP-208ENST00000482582 GSRP00390 522 aa11.95□□□□□ -0.5
TRAIP-208ENST00000482582 TDGF1P13385 188 aa11.95□□□□□ -0.5
TRAIP-208ENST00000482582 NDUFV2P19404 249 aa11.95□□□□□ -0.5
TRAIP-208ENST00000482582 CR2P20023 1033 aa11.95□□□□□ -0.5
TRAIP-208ENST00000482582 KCNJ1P48048 391 aa11.95□□□□□ -0.5
TRAIP-208ENST00000482582 PXNP49023 591 aaPredicted RBP11.95□□□□□ -0.5
TRAIP-208ENST00000482582 RENBPP51606 427 aa11.95□□□□□ -0.5
TRAIP-208ENST00000482582 CCNHP51946 323 aaPredicted RBP11.95□□□□□ -0.5
TRAIP-208ENST00000482582 DGKEP52429 567 aa11.95□□□□□ -0.5
TRAIP-208ENST00000482582 GDF10P55107 478 aa11.95□□□□□ -0.5
TRAIP-208ENST00000482582 DMWDQ09019 674 aa11.95□□□□□ -0.5
TRAIP-208ENST00000482582 NIPAL4Q0D2K0 466 aa11.95□□□□□ -0.5
TRAIP-208ENST00000482582 ZNF235Q14590 738 aa11.95□□□□□ -0.5
TRAIP-208ENST00000482582 STARD3Q14849 445 aa11.95□□□□□ -0.5
TRAIP-208ENST00000482582 CCNG2Q16589 344 aa11.95□□□□□ -0.5
TRAIP-208ENST00000482582 LPAL2Q16609 132 aa11.95□□□□□ -0.5
TRAIP-208ENST00000482582 MYLK3Q32MK0 819 aa11.95□□□□□ -0.5
TRAIP-208ENST00000482582 CACUL1Q86Y37 369 aa11.95□□□□□ -0.5
TRAIP-208ENST00000482582 PLPP6Q8IY26 295 aa11.95□□□□□ -0.5
TRAIP-208ENST00000482582 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.95□□□□□ -0.5
TRAIP-208ENST00000482582 OR2AP1Q8NGE2 309 aa11.95□□□□□ -0.5
TRAIP-208ENST00000482582 OR2T3Q8NH03 318 aa11.95□□□□□ -0.5
TRAIP-208ENST00000482582 HMGB4Q8WW32 186 aa11.95□□□□□ -0.5
TRAIP-208ENST00000482582 HTR3CQ8WXA8 447 aa11.95□□□□□ -0.5
TRAIP-208ENST00000482582 ZNF592Q92610 1267 aa11.95□□□□□ -0.5
TRAIP-208ENST00000482582 TMEM121Q9BTD3 319 aa11.95□□□□□ -0.5
TRAIP-208ENST00000482582 IER2Q9BTL4 223 aa11.95□□□□□ -0.5
TRAIP-208ENST00000482582 RSPH9Q9H1X1 276 aaPredicted RBP11.95□□□□□ -0.5
TRAIP-208ENST00000482582 HECAQ9UBI9 543 aaPredicted RBP11.95□□□□□ -0.5
TRAIP-208ENST00000482582 SLC8A2Q9UPR5 921 aa11.95□□□□□ -0.5
TRAIP-208ENST00000482582 ATP8A1Q9Y2Q0 1164 aa11.95□□□□□ -0.5
TRAIP-208ENST00000482582 WASF2Q9Y6W5 498 aa11.95□□□□□ -0.5
TRAIP-208ENST00000482582 CACNA1BQ00975 2339 aa11.95□□□□□ -0.5
TRAIP-208ENST00000482582 KCNN4O15554 427 aa11.94□□□□□ -0.5
TRAIP-208ENST00000482582 ZBTB24O43167 697 aaPredicted RBP11.94□□□□□ -0.5
TRAIP-208ENST00000482582 PAPSS2O95340 614 aaPredicted RBP11.94□□□□□ -0.5
TRAIP-208ENST00000482582 CHRNA3P32297 505 aa11.94□□□□□ -0.5
TRAIP-208ENST00000482582 CD68P34810 354 aaPredicted RBP11.94□□□□□ -0.5
TRAIP-208ENST00000482582 SCNN1BP51168 640 aa11.94□□□□□ -0.5
TRAIP-208ENST00000482582 CCR3P51677 355 aa11.94□□□□□ -0.5
TRAIP-208ENST00000482582 RPS14P62263 151 aaKnown RBP11.94□□□□□ -0.5
TRAIP-208ENST00000482582 SNRPD1P62314 119 aaKnown RBP11.94□□□□□ -0.5
TRAIP-208ENST00000482582 DSC2Q02487 901 aa11.94□□□□□ -0.5
TRAIP-208ENST00000482582 NSUN2Q08J23 767 aaKnown RBP eCLIP11.94□□□□□ -0.5
TRAIP-208ENST00000482582 BYSLQ13895 437 aaKnown RBP11.94□□□□□ -0.5
TRAIP-208ENST00000482582 ELAVL3Q14576 367 aaKnown RBP11.94□□□□□ -0.5
TRAIP-208ENST00000482582 PUM1Q14671 1186 aaKnown RBP eCLIP11.94□□□□□ -0.5
TRAIP-208ENST00000482582 POM121L1PQ3SYA9 428 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms