RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 TIGD7Q6NT04 549 aaPredicted RBP27.2■■□□□ 1.94
CCM2-211ENST00000478582 BBS12Q6ZW61 710 aa27.2■■□□□ 1.94
CCM2-211ENST00000478582 BZW1Q7L1Q6 419 aaKnown RBP27.2■■□□□ 1.94
CCM2-211ENST00000478582 LPCAT2Q7L5N7 544 aa27.2■■□□□ 1.94
CCM2-211ENST00000478582 CHST14Q8NCH0 376 aa27.2■■□□□ 1.94
CCM2-211ENST00000478582 OLFM3Q96PB7 478 aa27.2■■□□□ 1.94
CCM2-211ENST00000478582 HEPHQ9BQS7 1158 aa27.2■■□□□ 1.94
CCM2-211ENST00000478582 OSBPL8Q9BZF1 889 aa27.2■■□□□ 1.94
CCM2-211ENST00000478582 TM6SF2Q9BZW4 377 aa27.2■■□□□ 1.94
CCM2-211ENST00000478582 VPS45Q9NRW7 570 aa27.2■■□□□ 1.94
CCM2-211ENST00000478582 HECAQ9UBI9 543 aaPredicted RBP27.2■■□□□ 1.94
CCM2-211ENST00000478582 HEY1Q9Y5J3 304 aa27.2■■□□□ 1.94
CCM2-211ENST00000478582 MAP3K6O95382 1288 aa27.19■■□□□ 1.94
CCM2-211ENST00000478582 PRNPP04156 253 aa27.19■■□□□ 1.94
CCM2-211ENST00000478582 C5AR1P21730 350 aa27.19■■□□□ 1.94
CCM2-211ENST00000478582 SLC8A1P32418 973 aa27.19■■□□□ 1.94
CCM2-211ENST00000478582 CCNHP51946 323 aaPredicted RBP27.19■■□□□ 1.94
CCM2-211ENST00000478582 DYNLT1P63172 113 aa27.19■■□□□ 1.94
CCM2-211ENST00000478582 ZNF33AQ06730 810 aa27.19■■□□□ 1.94
CCM2-211ENST00000478582 FAM46CQ5VWP2 391 aa27.19■■□□□ 1.94
CCM2-211ENST00000478582 USP30Q70CQ3 517 aa27.19■■□□□ 1.94
CCM2-211ENST00000478582 LRIG1Q96JA1 1093 aa27.19■■□□□ 1.94
CCM2-211ENST00000478582 GDAP1L1Q96MZ0 367 aa27.19■■□□□ 1.94
CCM2-211ENST00000478582 BRD8Q9H0E9 1235 aa27.19■■□□□ 1.94
CCM2-211ENST00000478582 SEPT3Q9UH03 358 aa27.19■■□□□ 1.94
CCM2-211ENST00000478582 IL36AQ9UHA7 158 aa27.19■■□□□ 1.94
CCM2-211ENST00000478582 CDV3Q9UKY7 258 aaKnown RBP27.19■■□□□ 1.94
CCM2-211ENST00000478582 SARDHQ9UL12 918 aa27.19■■□□□ 1.94
CCM2-211ENST00000478582 WASF2Q9Y6W5 498 aa27.19■■□□□ 1.94
CCM2-211ENST00000478582 IGHV1OR15-9A0A0B4J2B8 117 aa27.18■■□□□ 1.94
CCM2-211ENST00000478582 C1QTNF3-AMACRE9PGA6 284 aa27.18■■□□□ 1.94
CCM2-211ENST00000478582 MATN3O15232 486 aa27.18■■□□□ 1.94
CCM2-211ENST00000478582 POP4O95707 220 aaKnown RBP27.18■■□□□ 1.94
CCM2-211ENST00000478582 IGSF6O95976 241 aa27.18■■□□□ 1.94
CCM2-211ENST00000478582 IL1BP01584 269 aa27.18■■□□□ 1.94
CCM2-211ENST00000478582 CTSLP07711 333 aa27.18■■□□□ 1.94
CCM2-211ENST00000478582 OXTRP30559 389 aa27.18■■□□□ 1.94
CCM2-211ENST00000478582 CSNK1DP48730 415 aa27.18■■□□□ 1.94
CCM2-211ENST00000478582 DHPSP49366 369 aaPredicted RBP27.18■■□□□ 1.94
CCM2-211ENST00000478582 PPIDQ08752 370 aaKnown RBP27.18■■□□□ 1.94
CCM2-211ENST00000478582 NSUN2Q08J23 767 aaKnown RBP eCLIP27.18■■□□□ 1.94
CCM2-211ENST00000478582 SLC10A7Q0GE19 358 aa27.18■■□□□ 1.94
CCM2-211ENST00000478582 HNRNPDQ14103 355 aaKnown RBP27.18■■□□□ 1.94
CCM2-211ENST00000478582 PDK1Q15118 436 aa27.18■■□□□ 1.94
CCM2-211ENST00000478582 LLGL1Q15334 1064 aa27.18■■□□□ 1.94
CCM2-211ENST00000478582 SF3A2Q15428 464 aaKnown RBP27.18■■□□□ 1.94
CCM2-211ENST00000478582 MYLK3Q32MK0 819 aa27.18■■□□□ 1.94
CCM2-211ENST00000478582 TTC31Q49AM3 519 aaPredicted RBP27.18■■□□□ 1.94
CCM2-211ENST00000478582 SPDYCQ5MJ68 293 aa27.18■■□□□ 1.94
CCM2-211ENST00000478582 NPNTQ6UXI9 565 aa27.18■■□□□ 1.94
CCM2-211ENST00000478582 SLC36A4Q6YBV0 504 aa27.18■■□□□ 1.94
CCM2-211ENST00000478582 ERMP1Q7Z2K6 904 aa27.18■■□□□ 1.94
CCM2-211ENST00000478582 TEX26Q8N6G2 289 aa27.18■■□□□ 1.94
CCM2-211ENST00000478582 C12orf50Q8NA57 414 aaPredicted RBP27.18■■□□□ 1.94
CCM2-211ENST00000478582 PIP4K2CQ8TBX8 421 aa27.18■■□□□ 1.94
CCM2-211ENST00000478582 NETO1Q8TDF5 533 aa27.18■■□□□ 1.94
CCM2-211ENST00000478582 NSMCE1Q8WV22 266 aa27.18■■□□□ 1.94
CCM2-211ENST00000478582 MAML1Q92585 1016 aa27.18■■□□□ 1.94
CCM2-211ENST00000478582 VOPP1Q96AW1 172 aa27.18■■□□□ 1.94
CCM2-211ENST00000478582 PSKH2Q96QS6 385 aa27.18■■□□□ 1.94
CCM2-211ENST00000478582 PYCARDQ9ULZ3 195 aa27.18■■□□□ 1.94
CCM2-211ENST00000478582 CYP8B1Q9UNU6 501 aa27.18■■□□□ 1.94
CCM2-211ENST00000478582 LOC105378220A0A1B0GUY1 285 aaPredicted RBP27.17■■□□□ 1.94
CCM2-211ENST00000478582 MID1O15344 667 aa27.17■■□□□ 1.94
CCM2-211ENST00000478582 PSMD8P48556 350 aa27.17■■□□□ 1.94
CCM2-211ENST00000478582 RENBPP51606 427 aa27.17■■□□□ 1.94
CCM2-211ENST00000478582 RPS6KA1Q15418 735 aa27.17■■□□□ 1.94
CCM2-211ENST00000478582 ATXN7L2Q5T6C5 722 aaPredicted RBP27.17■■□□□ 1.94
CCM2-211ENST00000478582 DCAF12L1Q5VU92 463 aa27.17■■□□□ 1.94
CCM2-211ENST00000478582 CACUL1Q86Y37 369 aa27.17■■□□□ 1.94
CCM2-211ENST00000478582 FAM131CQ96AQ9 280 aa27.17■■□□□ 1.94
CCM2-211ENST00000478582 HERPUD2Q9BSE4 406 aa27.17■■□□□ 1.94
CCM2-211ENST00000478582 CINPQ9BW66 212 aaPredicted RBP27.17■■□□□ 1.94
CCM2-211ENST00000478582 HEMGNQ9BXL5 484 aa27.17■■□□□ 1.94
CCM2-211ENST00000478582 CD93Q9NPY3 652 aa27.17■■□□□ 1.94
CCM2-211ENST00000478582 TRMT1Q9NXH9 659 aaKnown RBP27.17■■□□□ 1.94
CCM2-211ENST00000478582 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa27.16■■□□□ 1.94
CCM2-211ENST00000478582 APOC4-APOC2K7ER74 178 aa27.16■■□□□ 1.94
CCM2-211ENST00000478582 APOC2P02655 101 aa27.16■■□□□ 1.94
CCM2-211ENST00000478582 HSPA9P38646 679 aaKnown RBP27.16■■□□□ 1.94
CCM2-211ENST00000478582 AASDHQ4L235 1098 aaPredicted RBP27.16■■□□□ 1.94
CCM2-211ENST00000478582 ARSIQ5FYB1 569 aa27.16■■□□□ 1.94
CCM2-211ENST00000478582 MARC1Q5VT66 337 aa27.16■■□□□ 1.94
CCM2-211ENST00000478582 CYP2U1Q7Z449 544 aa27.16■■□□□ 1.94
CCM2-211ENST00000478582 CCDC13Q8IYE1 715 aa27.16■■□□□ 1.94
CCM2-211ENST00000478582 TMEFF1Q8IYR6 380 aa27.16■■□□□ 1.94
CCM2-211ENST00000478582 BBS5Q8N3I7 341 aa27.16■■□□□ 1.94
CCM2-211ENST00000478582 TSEN2Q8NCE0 465 aaKnown RBP27.16■■□□□ 1.94
CCM2-211ENST00000478582 CCNYQ8ND76 341 aa27.16■■□□□ 1.94
CCM2-211ENST00000478582 P3H4Q92791 437 aa27.16■■□□□ 1.94
CCM2-211ENST00000478582 RTKNQ9BST9 563 aa27.16■■□□□ 1.94
CCM2-211ENST00000478582 CPEB1Q9BZB8 566 aaKnown RBP27.16■■□□□ 1.94
CCM2-211ENST00000478582 SMOC1Q9H4F8 434 aa27.16■■□□□ 1.94
CCM2-211ENST00000478582 WSB2Q9NYS7 404 aaPredicted RBP27.16■■□□□ 1.94
CCM2-211ENST00000478582 NCKAP1Q9Y2A7 1128 aa27.16■■□□□ 1.94
CCM2-211ENST00000478582 DCHS1Q96JQ0 3298 aa27.15■■□□□ 1.94
CCM2-211ENST00000478582 GOLGA6L9A6NEM1 432 aa27.15■■□□□ 1.94
CCM2-211ENST00000478582 PPP1R12AO14974 1030 aaPredicted RBP27.15■■□□□ 1.94
CCM2-211ENST00000478582 GDF9O60383 454 aa27.15■■□□□ 1.94
CCM2-211ENST00000478582 LEFTY1O75610 366 aa27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms