RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 GCAP28676 217 aa13.92□□□□□ -0.18
TRAF4-210ENST00000475329 SKOR1P84550 965 aa13.92□□□□□ -0.18
TRAF4-210ENST00000475329 CRYMQ14894 314 aa13.92□□□□□ -0.18
TRAF4-210ENST00000475329 EFTUD2Q15029 972 aaKnown RBP eCLIP13.92□□□□□ -0.184e-8■■■■■ 34.9
TRAF4-210ENST00000475329 TMED2Q15363 201 aa13.92□□□□□ -0.18
TRAF4-210ENST00000475329 CYTH1Q15438 398 aa13.92□□□□□ -0.18
TRAF4-210ENST00000475329 INO80DQ53TQ3 878 aaPredicted RBP13.92□□□□□ -0.18
TRAF4-210ENST00000475329 POTEHQ6S545 545 aa13.92□□□□□ -0.18
TRAF4-210ENST00000475329 GET4Q7L5D6 327 aaPredicted RBP13.92□□□□□ -0.18
TRAF4-210ENST00000475329 TMEM25Q86YD3 366 aa13.92□□□□□ -0.18
TRAF4-210ENST00000475329 IRF7Q92985 503 aa13.92□□□□□ -0.18
TRAF4-210ENST00000475329 ACDQ96AP0 544 aa13.92□□□□□ -0.18
TRAF4-210ENST00000475329 PAFAH2Q99487 392 aa13.92□□□□□ -0.18
TRAF4-210ENST00000475329 APOL5Q9BWW9 433 aa13.92□□□□□ -0.18
TRAF4-210ENST00000475329 PLAC1Q9HBJ0 212 aa13.92□□□□□ -0.18
TRAF4-210ENST00000475329 EURLQ9NYK6 297 aa13.92□□□□□ -0.18
TRAF4-210ENST00000475329 CTNNAL1Q9UBT7 734 aa13.92□□□□□ -0.18
TRAF4-210ENST00000475329 ACTL7AQ9Y615 435 aa13.92□□□□□ -0.18
TRAF4-210ENST00000475329 WNT6Q9Y6F9 365 aa13.92□□□□□ -0.18
TRAF4-210ENST00000475329 CXorf51AA0A1B0GTR3 108 aa13.91□□□□□ -0.18
TRAF4-210ENST00000475329 FAM237BA0A1B0GVD1 139 aa13.91□□□□□ -0.18
TRAF4-210ENST00000475329 MAGEB16A2A368 324 aa13.91□□□□□ -0.18
TRAF4-210ENST00000475329 ATP9BO43861 1147 aa13.91□□□□□ -0.18
TRAF4-210ENST00000475329 SERPINF2P08697 491 aa13.91□□□□□ -0.18
TRAF4-210ENST00000475329 HOXB8P17481 243 aaPredicted RBP13.91□□□□□ -0.18
TRAF4-210ENST00000475329 PLK1P53350 603 aa13.91□□□□□ -0.18
TRAF4-210ENST00000475329 MAGOHP61326 146 aaKnown RBP13.91□□□□□ -0.18
TRAF4-210ENST00000475329 NR1H3Q13133 447 aa13.91□□□□□ -0.18
TRAF4-210ENST00000475329 PLEKHG6Q3KR16 790 aa13.91□□□□□ -0.18
TRAF4-210ENST00000475329 KBTBD12Q3ZCT8 623 aa13.91□□□□□ -0.18
TRAF4-210ENST00000475329 TNFAIP8L3Q5GJ75 292 aa13.91□□□□□ -0.18
TRAF4-210ENST00000475329 FAM78AQ5JUQ0 283 aa13.91□□□□□ -0.18
TRAF4-210ENST00000475329 CERCAMQ5T4B2 595 aa13.91□□□□□ -0.18
TRAF4-210ENST00000475329 ARMC3Q5W041 872 aa13.91□□□□□ -0.18
TRAF4-210ENST00000475329 DENND5AQ6IQ26 1287 aa13.91□□□□□ -0.18
TRAF4-210ENST00000475329 RETSATQ6NUM9 610 aa13.91□□□□□ -0.18
TRAF4-210ENST00000475329 SYCE2Q6PIF2 218 aa13.91□□□□□ -0.18
TRAF4-210ENST00000475329 LINGO4Q6UY18 593 aa13.91□□□□□ -0.18
TRAF4-210ENST00000475329 RANBP10Q6VN20 620 aa13.91□□□□□ -0.18
TRAF4-210ENST00000475329 METTL3Q86U44 580 aaKnown RBP13.91□□□□□ -0.18
TRAF4-210ENST00000475329 APCDD1Q8J025 514 aa13.91□□□□□ -0.18
TRAF4-210ENST00000475329 ARFGAP2Q8N6H7 521 aa13.91□□□□□ -0.18
TRAF4-210ENST00000475329 PPHLN1Q8NEY8 458 aaKnown RBP13.91□□□□□ -0.18
TRAF4-210ENST00000475329 PTCD2Q8WV60 388 aaKnown RBP13.91□□□□□ -0.18
TRAF4-210ENST00000475329 FGF13Q92913 245 aa13.91□□□□□ -0.18
TRAF4-210ENST00000475329 SMARCD2Q92925 531 aa13.91□□□□□ -0.18
TRAF4-210ENST00000475329 ZNF669Q96BR6 464 aaPredicted RBP13.91□□□□□ -0.18
TRAF4-210ENST00000475329 IFT43Q96FT9 208 aa13.91□□□□□ -0.18
TRAF4-210ENST00000475329 FEM1CQ96JP0 617 aa13.91□□□□□ -0.18
TRAF4-210ENST00000475329 ASB16Q96NS5 453 aa13.91□□□□□ -0.18
TRAF4-210ENST00000475329 DHRS4Q9BTZ2 278 aa13.91□□□□□ -0.18
TRAF4-210ENST00000475329 ZNF576Q9H609 170 aa13.91□□□□□ -0.18
TRAF4-210ENST00000475329 ARNT2Q9HBZ2 717 aa13.91□□□□□ -0.18
TRAF4-210ENST00000475329 SCUBE2Q9NQ36 999 aa13.91□□□□□ -0.18
TRAF4-210ENST00000475329 GDE1Q9NZC3 331 aa13.91□□□□□ -0.18
TRAF4-210ENST00000475329 LMCD1Q9NZU5 365 aa13.91□□□□□ -0.18
TRAF4-210ENST00000475329 MARK1Q9P0L2 795 aa13.91□□□□□ -0.18
TRAF4-210ENST00000475329 CLEC4EQ9ULY5 219 aa13.91□□□□□ -0.18
TRAF4-210ENST00000475329 SOX13Q9UN79 622 aa13.91□□□□□ -0.18
TRAF4-210ENST00000475329 IKBKGQ9Y6K9 419 aa13.91□□□□□ -0.18
TRAF4-210ENST00000475329 RPS6KL1Q9Y6S9 549 aa13.91□□□□□ -0.18
TRAF4-210ENST00000475329 TTC24A2A3L6 582 aaPredicted RBP13.9□□□□□ -0.18
TRAF4-210ENST00000475329 FAM159BA6NKW6 160 aa13.9□□□□□ -0.18
TRAF4-210ENST00000475329 USP1O94782 785 aa13.9□□□□□ -0.18
TRAF4-210ENST00000475329 C1QAP02745 245 aa13.9□□□□□ -0.18
TRAF4-210ENST00000475329 INHBAP08476 426 aa13.9□□□□□ -0.18
TRAF4-210ENST00000475329 TYRP14679 529 aa13.9□□□□□ -0.18
TRAF4-210ENST00000475329 TPH1P17752 444 aa13.9□□□□□ -0.18
TRAF4-210ENST00000475329 CR2P20023 1033 aa13.9□□□□□ -0.18
TRAF4-210ENST00000475329 HPDP32754 393 aaPredicted RBP13.9□□□□□ -0.18
TRAF4-210ENST00000475329 CD70P32970 193 aa13.9□□□□□ -0.18
TRAF4-210ENST00000475329 MSH2P43246 934 aa13.9□□□□□ -0.18
TRAF4-210ENST00000475329 RGRP47804 291 aa13.9□□□□□ -0.18
TRAF4-210ENST00000475329 RHOAP61586 193 aa13.9□□□□□ -0.18
TRAF4-210ENST00000475329 NAB1Q13506 487 aa13.9□□□□□ -0.18
TRAF4-210ENST00000475329 FRG1Q14331 258 aaKnown RBP13.9□□□□□ -0.18
TRAF4-210ENST00000475329 DMC1Q14565 340 aa13.9□□□□□ -0.18
TRAF4-210ENST00000475329 PITRM1Q5JRX3 1037 aa13.9□□□□□ -0.18
TRAF4-210ENST00000475329 PCID2Q5JVF3 399 aa13.9□□□□□ -0.18
TRAF4-210ENST00000475329 LY6G5CQ5SRR4 150 aa13.9□□□□□ -0.18
TRAF4-210ENST00000475329 ZNF449Q6P9G9 518 aa13.9□□□□□ -0.18
TRAF4-210ENST00000475329 KDM7AQ6ZMT4 941 aa13.9□□□□□ -0.18
TRAF4-210ENST00000475329 CYS1Q717R9 158 aa13.9□□□□□ -0.18
TRAF4-210ENST00000475329 TAOK1Q7L7X3 1001 aa13.9□□□□□ -0.18
TRAF4-210ENST00000475329 SLC25A41Q8N5S1 370 aa13.9□□□□□ -0.18
TRAF4-210ENST00000475329 PPM1NQ8N819 430 aa13.9□□□□□ -0.18
TRAF4-210ENST00000475329 BPIFB1Q8TDL5 484 aa13.9□□□□□ -0.18
TRAF4-210ENST00000475329 SLC44A1Q8WWI5 657 aa13.9□□□□□ -0.18
TRAF4-210ENST00000475329 TTC17Q96AE7 1141 aa13.9□□□□□ -0.18
TRAF4-210ENST00000475329 RSPRY1Q96DX4 576 aa13.9□□□□□ -0.18
TRAF4-210ENST00000475329 MRRFQ96E11 262 aaKnown RBP13.9□□□□□ -0.18
TRAF4-210ENST00000475329 LMLNQ96KR4 655 aa13.9□□□□□ -0.18
TRAF4-210ENST00000475329 NUDCD1Q96RS6 583 aa13.9□□□□□ -0.18
TRAF4-210ENST00000475329 TRIM56Q9BRZ2 755 aaKnown RBP13.9□□□□□ -0.18
TRAF4-210ENST00000475329 KIFC1Q9BW19 673 aa13.9□□□□□ -0.18
TRAF4-210ENST00000475329 SLC2A11Q9BYW1 496 aa13.9□□□□□ -0.18
TRAF4-210ENST00000475329 LINC00597Q9H2U6 94 aa13.9□□□□□ -0.18
TRAF4-210ENST00000475329 MRM3Q9HC36 420 aaKnown RBP13.9□□□□□ -0.18
TRAF4-210ENST00000475329 ABCB8Q9NUT2 735 aa13.9□□□□□ -0.18
TRAF4-210ENST00000475329 DUS2Q9NX74 493 aaKnown RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms