RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 EXOC2Q96KP1 924 aa17.1■□□□□ 0.33
CCM2-205ENST00000472223 NUDCD1Q96RS6 583 aa17.1■□□□□ 0.33
CCM2-205ENST00000472223 ACOX2Q99424 681 aa17.1■□□□□ 0.33
CCM2-205ENST00000472223 GABRG3Q99928 467 aa17.1■□□□□ 0.33
CCM2-205ENST00000472223 MGME1Q9BQP7 344 aa17.1■□□□□ 0.33
CCM2-205ENST00000472223 HEPHQ9BQS7 1158 aa17.1■□□□□ 0.33
CCM2-205ENST00000472223 CEP41Q9BYV8 373 aa17.1■□□□□ 0.33
CCM2-205ENST00000472223 ZDHHC4Q9NPG8 344 aa17.1■□□□□ 0.33
CCM2-205ENST00000472223 MMP17Q9ULZ9 603 aa17.1■□□□□ 0.33
CCM2-205ENST00000472223 ATP8A1Q9Y2Q0 1164 aa17.1■□□□□ 0.33
CCM2-205ENST00000472223 AAR2Q9Y312 384 aaKnown RBP17.1■□□□□ 0.33
CCM2-205ENST00000472223 WASH3PC4AMC7 463 aa17.09■□□□□ 0.33
CCM2-205ENST00000472223 E7EVH7 732 aa17.09■□□□□ 0.33
CCM2-205ENST00000472223 C1QTNF3-AMACRE9PGA6 284 aa17.09■□□□□ 0.33
CCM2-205ENST00000472223 TNFRSF10AO00220 468 aa17.09■□□□□ 0.33
CCM2-205ENST00000472223 ALOX15BO15296 676 aa17.09■□□□□ 0.33
CCM2-205ENST00000472223 INSIG1O15503 277 aa17.09■□□□□ 0.33
CCM2-205ENST00000472223 PSMD3O43242 534 aa17.09■□□□□ 0.33
CCM2-205ENST00000472223 ANXA9O76027 345 aa17.09■□□□□ 0.33
CCM2-205ENST00000472223 ALDH1A2O94788 518 aa17.09■□□□□ 0.33
CCM2-205ENST00000472223 KRT14P02533 472 aa17.09■□□□□ 0.33
CCM2-205ENST00000472223 PRNPP04156 253 aa17.09■□□□□ 0.33
CCM2-205ENST00000472223 HLA-DQB2P05538 268 aa17.09■□□□□ 0.33
CCM2-205ENST00000472223 PRKCHP24723 683 aa17.09■□□□□ 0.33
CCM2-205ENST00000472223 CLCN5P51795 746 aa17.09■□□□□ 0.33
CCM2-205ENST00000472223 MAXP61244 160 aa17.09■□□□□ 0.33
CCM2-205ENST00000472223 AP1S1P61966 158 aa17.09■□□□□ 0.33
CCM2-205ENST00000472223 ENPP2Q13822 863 aa17.09■□□□□ 0.33
CCM2-205ENST00000472223 PARP6Q2NL67 630 aa17.09■□□□□ 0.33
CCM2-205ENST00000472223 FAM46CQ5VWP2 391 aa17.09■□□□□ 0.33
CCM2-205ENST00000472223 TTC27Q6P3X3 843 aa17.09■□□□□ 0.33
CCM2-205ENST00000472223 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.09■□□□□ 0.33
CCM2-205ENST00000472223 ZNF366Q8N895 744 aa17.09■□□□□ 0.33
CCM2-205ENST00000472223 CCDC110Q8TBZ0 833 aa17.09■□□□□ 0.33
CCM2-205ENST00000472223 FRS2Q8WU20 508 aa17.09■□□□□ 0.33
CCM2-205ENST00000472223 PTPRN2Q92932 1015 aa17.09■□□□□ 0.33
CCM2-205ENST00000472223 PBXIP1Q96AQ6 731 aa17.09■□□□□ 0.33
CCM2-205ENST00000472223 CLDN23Q96B33 292 aa17.09■□□□□ 0.33
CCM2-205ENST00000472223 RTP4Q96DX8 246 aa17.09■□□□□ 0.33
CCM2-205ENST00000472223 MYO19Q96H55 970 aa17.09■□□□□ 0.33
CCM2-205ENST00000472223 LRIG1Q96JA1 1093 aa17.09■□□□□ 0.33
CCM2-205ENST00000472223 SEMA3CQ99985 751 aa17.09■□□□□ 0.33
CCM2-205ENST00000472223 CARD6Q9BX69 1037 aa17.09■□□□□ 0.33
CCM2-205ENST00000472223 OSBPL1AQ9BXW6 950 aa17.09■□□□□ 0.33
CCM2-205ENST00000472223 SLC25A51Q9H1U9 297 aa17.09■□□□□ 0.33
CCM2-205ENST00000472223 ATP13A3Q9H7F0 1226 aa17.09■□□□□ 0.33
CCM2-205ENST00000472223 GLOD4Q9HC38 313 aa17.09■□□□□ 0.33
CCM2-205ENST00000472223 DYRK4Q9NR20 520 aa17.09■□□□□ 0.33
CCM2-205ENST00000472223 LHX3Q9UBR4 397 aa17.09■□□□□ 0.33
CCM2-205ENST00000472223 IL36AQ9UHA7 158 aa17.09■□□□□ 0.33
CCM2-205ENST00000472223 NDC80O14777 642 aa17.08■□□□□ 0.32
CCM2-205ENST00000472223 SIN3BO75182 1162 aa17.08■□□□□ 0.32
CCM2-205ENST00000472223 SERPINA4P29622 427 aa17.08■□□□□ 0.32
CCM2-205ENST00000472223 FDFT1P37268 417 aa17.08■□□□□ 0.32
CCM2-205ENST00000472223 CCNHP51946 323 aaPredicted RBP17.08■□□□□ 0.32
CCM2-205ENST00000472223 DGKEP52429 567 aa17.08■□□□□ 0.32
CCM2-205ENST00000472223 TUBB4BP68371 445 aa17.08■□□□□ 0.32
CCM2-205ENST00000472223 BCL2L1Q07817 233 aa17.08■□□□□ 0.32
CCM2-205ENST00000472223 CCDC15Q0P6D6 951 aa17.08■□□□□ 0.32
CCM2-205ENST00000472223 ATXN7L2Q5T6C5 722 aaPredicted RBP17.08■□□□□ 0.32
CCM2-205ENST00000472223 C8orf74Q6P047 294 aa17.08■□□□□ 0.32
CCM2-205ENST00000472223 DPY19L3Q6ZPD9 716 aa17.08■□□□□ 0.32
CCM2-205ENST00000472223 SYT13Q7L8C5 426 aa17.08■□□□□ 0.32
CCM2-205ENST00000472223 SPEM1Q8N4L4 309 aa17.08■□□□□ 0.32
CCM2-205ENST00000472223 OR2A12Q8NGT7 310 aa17.08■□□□□ 0.32
CCM2-205ENST00000472223 SLCO2A1Q92959 643 aa17.08■□□□□ 0.32
CCM2-205ENST00000472223 TUBGCP5Q96RT8 1024 aa17.08■□□□□ 0.32
CCM2-205ENST00000472223 CHRDQ9H2X0 955 aa17.08■□□□□ 0.32
CCM2-205ENST00000472223 ZDHHC6Q9H6R6 413 aa17.08■□□□□ 0.32
CCM2-205ENST00000472223 PCDH9Q9HC56 1237 aa17.08■□□□□ 0.32
CCM2-205ENST00000472223 ASIC3Q9UHC3 531 aa17.08■□□□□ 0.32
CCM2-205ENST00000472223 EVLQ9UI08 416 aaPredicted RBP17.08■□□□□ 0.32
CCM2-205ENST00000472223 NCOR1O75376 2440 aa17.08■□□□□ 0.32
CCM2-205ENST00000472223 A0A1W2PQ67 120 aa17.07■□□□□ 0.32
CCM2-205ENST00000472223 FAM187AA6NFU0 413 aa17.07■□□□□ 0.32
CCM2-205ENST00000472223 IL1BP01584 269 aa17.07■□□□□ 0.32
CCM2-205ENST00000472223 DCNP07585 359 aaKnown RBP17.07■□□□□ 0.32
CCM2-205ENST00000472223 AOC1P19801 751 aa17.07■□□□□ 0.32
CCM2-205ENST00000472223 NFKB1P19838 968 aa17.07■□□□□ 0.32
CCM2-205ENST00000472223 NFKBIAP25963 317 aa17.07■□□□□ 0.32
CCM2-205ENST00000472223 ADCY8P40145 1251 aa17.07■□□□□ 0.32
CCM2-205ENST00000472223 GEMP55040 296 aa17.07■□□□□ 0.32
CCM2-205ENST00000472223 GDF10P55107 478 aa17.07■□□□□ 0.32
CCM2-205ENST00000472223 CAMK2GQ13555 558 aaPredicted RBP17.07■□□□□ 0.32
CCM2-205ENST00000472223 C9orf64Q5T6V5 341 aa17.07■□□□□ 0.32
CCM2-205ENST00000472223 Q6ZS52 159 aa17.07■□□□□ 0.32
CCM2-205ENST00000472223 NDUFAF2Q8N183 169 aa17.07■□□□□ 0.32
CCM2-205ENST00000472223 ZNF687Q8N1G0 1237 aa17.07■□□□□ 0.32
CCM2-205ENST00000472223 STK40Q8N2I9 435 aa17.07■□□□□ 0.32
CCM2-205ENST00000472223 PGBD3Q8N328 593 aa17.07■□□□□ 0.32
CCM2-205ENST00000472223 PGBD5Q8N414 524 aa17.07■□□□□ 0.32
CCM2-205ENST00000472223 CNTD1Q8N815 330 aa17.07■□□□□ 0.32
CCM2-205ENST00000472223 OR2T3Q8NH03 318 aa17.07■□□□□ 0.32
CCM2-205ENST00000472223 IFT43Q96FT9 208 aa17.07■□□□□ 0.32
CCM2-205ENST00000472223 PPP1R16AQ96I34 528 aa17.07■□□□□ 0.32
CCM2-205ENST00000472223 FCRL5Q96RD9 977 aa17.07■□□□□ 0.32
CCM2-205ENST00000472223 CPEB1Q9BZB8 566 aaKnown RBP17.07■□□□□ 0.32
CCM2-205ENST00000472223 RAB17Q9H0T7 212 aa17.07■□□□□ 0.32
CCM2-205ENST00000472223 GBA3Q9H227 469 aa17.07■□□□□ 0.32
CCM2-205ENST00000472223 L2HGDHQ9H9P8 463 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms