RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 DNAAF5Q86Y56 855 aa9.28□□□□□ -0.92
SF3A1-206ENST00000471037 ATP6V0D2Q8N8Y2 350 aa9.28□□□□□ -0.92
SF3A1-206ENST00000471037 TMEM145Q8NBT3 493 aa9.28□□□□□ -0.92
SF3A1-206ENST00000471037 ARHGEF26Q96DR7 871 aa9.28□□□□□ -0.92
SF3A1-206ENST00000471037 ALG14Q96F25 216 aa9.28□□□□□ -0.92
SF3A1-206ENST00000471037 LZTFL1Q9NQ48 299 aa9.28□□□□□ -0.92
SF3A1-206ENST00000471037 PARVAQ9NVD7 372 aa9.28□□□□□ -0.92
SF3A1-206ENST00000471037 MYO1AQ9UBC5 1043 aa9.28□□□□□ -0.92
SF3A1-206ENST00000471037 LCMT1Q9UIC8 334 aa9.28□□□□□ -0.92
SF3A1-206ENST00000471037 SARDHQ9UL12 918 aa9.28□□□□□ -0.92
SF3A1-206ENST00000471037 PPM1HQ9ULR3 514 aa9.28□□□□□ -0.92
SF3A1-206ENST00000471037 TFR2Q9UP52 801 aa9.28□□□□□ -0.92
SF3A1-206ENST00000471037 RAI2Q9Y5P3 530 aa9.28□□□□□ -0.92
SF3A1-206ENST00000471037 PTPRQQ9UMZ3 2332 aa9.28□□□□□ -0.92
SF3A1-206ENST00000471037 ASXL3Q9C0F0 2248 aa9.27□□□□□ -0.93
SF3A1-206ENST00000471037 A0A0U1RQJ8 604 aa9.27□□□□□ -0.93
SF3A1-206ENST00000471037 TCRBV5S1A1TA0A578 114 aa9.27□□□□□ -0.93
SF3A1-206ENST00000471037 C1QTNF3-AMACRE9PGA6 284 aa9.27□□□□□ -0.93
SF3A1-206ENST00000471037 PRAMEF26H0Y7S4 382 aa9.27□□□□□ -0.93
SF3A1-206ENST00000471037 TRIM38O00635 465 aa9.27□□□□□ -0.93
SF3A1-206ENST00000471037 MCF2LO15068 1137 aa9.27□□□□□ -0.93
SF3A1-206ENST00000471037 ATMINO43313 823 aaPredicted RBP9.27□□□□□ -0.93
SF3A1-206ENST00000471037 SIGLEC6O43699 453 aa9.27□□□□□ -0.93
SF3A1-206ENST00000471037 KIF5CO60282 957 aa9.27□□□□□ -0.93
SF3A1-206ENST00000471037 GLI1P08151 1106 aa9.27□□□□□ -0.93
SF3A1-206ENST00000471037 MAT2AP31153 395 aaKnown RBP9.27□□□□□ -0.93
SF3A1-206ENST00000471037 NOP2P46087 812 aaKnown RBP9.27□□□□□ -0.93
SF3A1-206ENST00000471037 NAP1L1P55209 391 aaKnown RBP9.27□□□□□ -0.93
SF3A1-206ENST00000471037 PITX1P78337 314 aaPredicted RBP9.27□□□□□ -0.93
SF3A1-206ENST00000471037 E2F1Q01094 437 aa9.27□□□□□ -0.93
SF3A1-206ENST00000471037 TLE3Q04726 772 aa9.27□□□□□ -0.93
SF3A1-206ENST00000471037 CNTN1Q12860 1018 aa9.27□□□□□ -0.93
SF3A1-206ENST00000471037 MTA1Q13330 715 aa9.27□□□□□ -0.93
SF3A1-206ENST00000471037 MAMLD1Q13495 774 aa9.27□□□□□ -0.93
SF3A1-206ENST00000471037 C2CD6Q53TS8 623 aa9.27□□□□□ -0.93
SF3A1-206ENST00000471037 RABGAP1LQ5R372 815 aa9.27□□□□□ -0.93
SF3A1-206ENST00000471037 OR6B2Q6IFH4 312 aa9.27□□□□□ -0.93
SF3A1-206ENST00000471037 FBXL22Q6P050 247 aa9.27□□□□□ -0.93
SF3A1-206ENST00000471037 OLFML1Q6UWY5 402 aa9.27□□□□□ -0.93
SF3A1-206ENST00000471037 FAM183BPQ6ZVS7 135 aa9.27□□□□□ -0.93
SF3A1-206ENST00000471037 ARCQ7LC44 396 aa9.27□□□□□ -0.93
SF3A1-206ENST00000471037 CIR1Q86X95 450 aaPredicted RBP9.27□□□□□ -0.93
SF3A1-206ENST00000471037 C17orf53Q8N3J3 647 aaPredicted RBP9.27□□□□□ -0.93
SF3A1-206ENST00000471037 SLC25A45Q8N413 288 aa9.27□□□□□ -0.93
SF3A1-206ENST00000471037 OR4C6Q8NH72 309 aa9.27□□□□□ -0.93
SF3A1-206ENST00000471037 SLC35G2Q8TBE7 412 aa9.27□□□□□ -0.93
SF3A1-206ENST00000471037 ZNF564Q8TBZ8 553 aaPredicted RBP9.27□□□□□ -0.93
SF3A1-206ENST00000471037 SELENOOQ9BVL4 669 aa9.27□□□□□ -0.93
SF3A1-206ENST00000471037 NUP85Q9BW27 656 aa9.27□□□□□ -0.93
SF3A1-206ENST00000471037 PREBQ9HCU5 417 aa9.27□□□□□ -0.93
SF3A1-206ENST00000471037 ASNSD1Q9NWL6 643 aa9.27□□□□□ -0.93
SF3A1-206ENST00000471037 CTTNBP2NLQ9P2B4 639 aa9.27□□□□□ -0.93
SF3A1-206ENST00000471037 TRIM10Q9UDY6 481 aa9.27□□□□□ -0.93
SF3A1-206ENST00000471037 SLC12A6Q9UHW9 1150 aa9.27□□□□□ -0.93
SF3A1-206ENST00000471037 SLC25A13Q9UJS0 675 aa9.27□□□□□ -0.93
SF3A1-206ENST00000471037 GUCA1BQ9UMX6 200 aa9.27□□□□□ -0.93
SF3A1-206ENST00000471037 ARID1BQ8NFD5 2236 aaPredicted RBP9.26□□□□□ -0.93
SF3A1-206ENST00000471037 FAM170AA1A519 330 aa9.26□□□□□ -0.93
SF3A1-206ENST00000471037 MACROD2A1Z1Q3 448 aa9.26□□□□□ -0.93
SF3A1-206ENST00000471037 SIGLEC16A6NMB1 481 aa9.26□□□□□ -0.93
SF3A1-206ENST00000471037 GOLGA8SH3BPF8 625 aa9.26□□□□□ -0.93
SF3A1-206ENST00000471037 KIF2AO00139 706 aaPredicted RBP9.26□□□□□ -0.93
SF3A1-206ENST00000471037 ZNF500O60304 480 aaPredicted RBP9.26□□□□□ -0.93
SF3A1-206ENST00000471037 SDC3O75056 442 aa9.26□□□□□ -0.93
SF3A1-206ENST00000471037 TUBB4AP04350 444 aa9.26□□□□□ -0.93
SF3A1-206ENST00000471037 KRT3P12035 628 aa9.26□□□□□ -0.93
SF3A1-206ENST00000471037 CCR1P32246 355 aa9.26□□□□□ -0.93
SF3A1-206ENST00000471037 TAS2R38P59533 333 aa9.26□□□□□ -0.93
SF3A1-206ENST00000471037 SLC6A3Q01959 620 aa9.26□□□□□ -0.93
SF3A1-206ENST00000471037 DLG2Q15700 870 aa9.26□□□□□ -0.93
SF3A1-206ENST00000471037 EFHC1Q5JVL4 640 aa9.26□□□□□ -0.93
SF3A1-206ENST00000471037 PPP1R15BQ5SWA1 713 aa9.26□□□□□ -0.93
SF3A1-206ENST00000471037 FAM102AQ5T9C2 384 aaPredicted RBP9.26□□□□□ -0.93
SF3A1-206ENST00000471037 PIP5KL1Q5T9C9 394 aa9.26□□□□□ -0.93
SF3A1-206ENST00000471037 NEK5Q6P3R8 708 aa9.26□□□□□ -0.93
SF3A1-206ENST00000471037 DCUN1D2Q6PH85 259 aa9.26□□□□□ -0.93
SF3A1-206ENST00000471037 Q6ZVU0 165 aa9.26□□□□□ -0.93
SF3A1-206ENST00000471037 SLC26A9Q7LBE3 791 aa9.26□□□□□ -0.93
SF3A1-206ENST00000471037 GPR155Q7Z3F1 870 aa9.26□□□□□ -0.93
SF3A1-206ENST00000471037 SPACA3Q8IXA5 215 aa9.26□□□□□ -0.93
SF3A1-206ENST00000471037 SH2D3CQ8N5H7 860 aa9.26□□□□□ -0.93
SF3A1-206ENST00000471037 TRIM58Q8NG06 486 aa9.26□□□□□ -0.93
SF3A1-206ENST00000471037 OR52K2Q8NGK3 314 aa9.26□□□□□ -0.93
SF3A1-206ENST00000471037 FNIP1Q8TF40 1166 aa9.26□□□□□ -0.93
SF3A1-206ENST00000471037 UBE2Q2Q8WVN8 375 aa9.26□□□□□ -0.93
SF3A1-206ENST00000471037 KLHDC7BQ96G42 594 aa9.26□□□□□ -0.93
SF3A1-206ENST00000471037 RPRD1AQ96P16 312 aaPredicted RBP9.26□□□□□ -0.93
SF3A1-206ENST00000471037 ALS2CR12Q96Q35 445 aa9.26□□□□□ -0.93
SF3A1-206ENST00000471037 SLC2A13Q96QE2 648 aa9.26□□□□□ -0.93
SF3A1-206ENST00000471037 FEM1AQ9BSK4 669 aa9.26□□□□□ -0.93
SF3A1-206ENST00000471037 FAM204AQ9H8W3 233 aa9.26□□□□□ -0.93
SF3A1-206ENST00000471037 KLHL11Q9NVR0 708 aa9.26□□□□□ -0.93
SF3A1-206ENST00000471037 DDIT4Q9NX09 232 aa9.26□□□□□ -0.93
SF3A1-206ENST00000471037 SALL4Q9UJQ4 1053 aa9.26□□□□□ -0.93
SF3A1-206ENST00000471037 HS3ST2Q9Y278 367 aa9.26□□□□□ -0.93
SF3A1-206ENST00000471037 TBC1D30Q9Y2I9 924 aa9.26□□□□□ -0.93
SF3A1-206ENST00000471037 OR51B4Q9Y5P0 310 aa9.26□□□□□ -0.93
SF3A1-206ENST00000471037 DUSP10Q9Y6W6 482 aa9.26□□□□□ -0.93
SF3A1-206ENST00000471037 MYLKQ15746 1914 aa9.26□□□□□ -0.93
SF3A1-206ENST00000471037 KALRNO60229 2985 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms