RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 XRCC4Q13426 336 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 HNRNPDQ14103 355 aaKnown RBP3.59□□□□□ -1.83
TRIM59-202ENST00000468542 DPYSL3Q14195 570 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 KRT81Q14533 505 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 MESDQ14696 234 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 PDK1Q15118 436 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 ANGPT1Q15389 498 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 SLC14A2Q15849 920 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 CA9Q16790 459 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 SMTNL2Q2TAL5 461 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 C2orf27AQ580R0 203 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 ODF2Q5BJF6 829 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 ANKRD20A8PQ5CZ79 823 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 TFDP3Q5H9I0 405 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 PPP6R3Q5H9R7 873 aaPredicted RBP3.59□□□□□ -1.83
TRIM59-202ENST00000468542 KCNT1Q5JUK3 1230 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 C9orf64Q5T6V5 341 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 FAM46CQ5VWP2 391 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 RNF219Q5W0B1 726 aaPredicted RBP3.59□□□□□ -1.83
TRIM59-202ENST00000468542 EGFLAMQ63HQ2 1017 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 NAIF1Q69YI7 327 aaPredicted RBP3.59□□□□□ -1.83
TRIM59-202ENST00000468542 TXNRD3NBQ6F5E7 133 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 ALG1LQ6GMV1 187 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 TIGD7Q6NT04 549 aaPredicted RBP3.59□□□□□ -1.83
TRIM59-202ENST00000468542 BBS12Q6ZW61 710 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 PEX26Q7Z412 305 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 TFAP2DQ7Z6R9 452 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 NT5DC3Q86UY8 548 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 KBTBD6Q86V97 674 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 WDR5BQ86VZ2 330 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 LONP2Q86WA8 852 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 CIR1Q86X95 450 aaPredicted RBP3.59□□□□□ -1.83
TRIM59-202ENST00000468542 ARHGAP12Q8IWW6 846 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 MAML2Q8IZL2 1156 aaPredicted RBP3.59□□□□□ -1.83
TRIM59-202ENST00000468542 APCDD1Q8J025 514 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 PYROXD2Q8N2H3 581 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 BBS5Q8N3I7 341 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 SH2D3CQ8N5H7 860 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 ALLCQ8N6M5 410 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 PCDH20Q8N6Y1 951 aaKnown RBP3.59□□□□□ -1.83
TRIM59-202ENST00000468542 NPWQ8N729 165 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 PQLC3Q8N755 202 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 UBL4BQ8N7F7 174 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 TXNDC5Q8NBS9 432 aaKnown RBP3.59□□□□□ -1.83
TRIM59-202ENST00000468542 KCTD6Q8NC69 237 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 ACRBPQ8NEB7 543 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 TMIEQ8NEW7 156 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 TSTD1Q8NFU3 115 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 OR2AP1Q8NGE2 309 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 OR52K2Q8NGK3 314 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 OR2T3Q8NH03 318 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 PCDH19Q8TAB3 1148 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 TTC8Q8TAM2 541 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 WFDC5Q8TCV5 224 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 HCAR2Q8TDS4 363 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 RAPGEF5Q92565 580 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 HSPH1Q92598 858 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 ARHGEF2Q92974 986 aaKnown RBP3.59□□□□□ -1.83
TRIM59-202ENST00000468542 BHMTQ93088 406 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 HDAC11Q96DB2 347 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 HES6Q96HZ4 224 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 BTBD6Q96KE9 485 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 MRGPRX3Q96LB0 322 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 MRGPRX1Q96LB2 322 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 ZNF830Q96NB3 372 aaPredicted RBP3.59□□□□□ -1.83
TRIM59-202ENST00000468542 OLFM3Q96PB7 478 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 RNF157Q96PX1 679 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 PSKH2Q96QS6 385 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 TUBGCP5Q96RT8 1024 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 PSMB7Q99436 277 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 VAT1Q99536 393 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 DESI2Q9BSY9 194 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 CALN1Q9BXU9 219 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 OSBPL1AQ9BXW6 950 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 FRMD8P1Q9BZ68 369 aaPredicted RBP3.59□□□□□ -1.83
TRIM59-202ENST00000468542 CPEB1Q9BZB8 566 aaKnown RBP3.59□□□□□ -1.83
TRIM59-202ENST00000468542 RSPH9Q9H1X1 276 aaPredicted RBP3.59□□□□□ -1.83
TRIM59-202ENST00000468542 CARD9Q9H257 536 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 NOL6Q9H6R4 1146 aaKnown RBP3.59□□□□□ -1.83
TRIM59-202ENST00000468542 PDFQ9HBH1 243 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 ATP13A1Q9HD20 1204 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 RBM12Q9NTZ6 932 aaKnown RBP3.59□□□□□ -1.83
TRIM59-202ENST00000468542 SPATA6Q9NWH7 488 aaPredicted RBP3.59□□□□□ -1.83
TRIM59-202ENST00000468542 ZSCAN32Q9NX65 697 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 MPP6Q9NZW5 540 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 USP36Q9P275 1121 aaKnown RBP3.59□□□□□ -1.83
TRIM59-202ENST00000468542 SALL4Q9UJQ4 1053 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 SLC25A13Q9UJS0 675 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 MKL2Q9ULH7 1088 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 FZD4Q9ULV1 537 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 ERVW-1Q9UQF0 538 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 ZKSCAN5Q9Y2L8 839 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 PPP2R2CQ9Y2T4 447 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 JRKLQ9Y4A0 524 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 STON1Q9Y6Q2 735 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 DUSP10Q9Y6W6 482 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 LRRK1Q38SD2 2015 aa3.59□□□□□ -1.83
TRIM59-202ENST00000468542 PLXNA2O75051 1894 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 DOCK9Q9BZ29 2069 aa3.58□□□□□ -1.84
TRIM59-202ENST00000468542 PTPRZ1P23471 2315 aaPredicted RBP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms