RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 HIBCHQ6NVY1 386 aaPredicted RBP14.55□□□□□ -0.08
COL6A1-202ENST00000463060 C22orf39Q6P5X5 142 aa14.55□□□□□ -0.08
COL6A1-202ENST00000463060 KDELC1Q6UW63 502 aa14.55□□□□□ -0.08
COL6A1-202ENST00000463060 NUDT18Q6ZVK8 323 aa14.55□□□□□ -0.08
COL6A1-202ENST00000463060 BBS5Q8N3I7 341 aa14.55□□□□□ -0.08
COL6A1-202ENST00000463060 GPR161Q8N6U8 529 aaKnown RBP14.55□□□□□ -0.08
COL6A1-202ENST00000463060 NAT8LQ8N9F0 302 aa14.55□□□□□ -0.08
COL6A1-202ENST00000463060 SPATA22Q8NHS9 363 aa14.55□□□□□ -0.08
COL6A1-202ENST00000463060 KCNV2Q8TDN2 545 aa14.55□□□□□ -0.08
COL6A1-202ENST00000463060 RUBCNQ92622 972 aa14.55□□□□□ -0.08
COL6A1-202ENST00000463060 PTPRN2Q92932 1015 aa14.55□□□□□ -0.08
COL6A1-202ENST00000463060 SNF8Q96H20 258 aa14.55□□□□□ -0.08
COL6A1-202ENST00000463060 SEMA3CQ99985 751 aa14.55□□□□□ -0.08
COL6A1-202ENST00000463060 CINPQ9BW66 212 aaPredicted RBP14.55□□□□□ -0.08
COL6A1-202ENST00000463060 TRIM31Q9BZY9 425 aa14.55□□□□□ -0.08
COL6A1-202ENST00000463060 DPH5Q9H2P9 285 aa14.55□□□□□ -0.08
COL6A1-202ENST00000463060 ZDHHC18Q9NUE0 388 aa14.55□□□□□ -0.08
COL6A1-202ENST00000463060 RSPH14Q9UHP6 348 aa14.55□□□□□ -0.08
COL6A1-202ENST00000463060 TPX2Q9ULW0 747 aaKnown RBP14.55□□□□□ -0.08
COL6A1-202ENST00000463060 PLA2G4CQ9UP65 541 aa14.55□□□□□ -0.08
COL6A1-202ENST00000463060 ESYT3A0FGR9 886 aa14.54□□□□□ -0.08
COL6A1-202ENST00000463060 KRBA1A5PL33 1030 aa14.54□□□□□ -0.08
COL6A1-202ENST00000463060 WASH3PC4AMC7 463 aa14.54□□□□□ -0.08
COL6A1-202ENST00000463060 MAN2B1O00754 1011 aa14.54□□□□□ -0.08
COL6A1-202ENST00000463060 NPC1O15118 1278 aa14.54□□□□□ -0.08
COL6A1-202ENST00000463060 INSIG1O15503 277 aa14.54□□□□□ -0.08
COL6A1-202ENST00000463060 ANXA9O76027 345 aa14.54□□□□□ -0.08
COL6A1-202ENST00000463060 SUN1O94901 812 aa14.54□□□□□ -0.08
COL6A1-202ENST00000463060 EGFP01133 1207 aa14.54□□□□□ -0.08
COL6A1-202ENST00000463060 TPSB2P20231 275 aa14.54□□□□□ -0.08
COL6A1-202ENST00000463060 TNFRSF8P28908 595 aa14.54□□□□□ -0.08
COL6A1-202ENST00000463060 ECHS1P30084 290 aa14.54□□□□□ -0.08
COL6A1-202ENST00000463060 ADRA1AP35348 466 aa14.54□□□□□ -0.08
COL6A1-202ENST00000463060 CARSP49589 748 aaKnown RBP14.54□□□□□ -0.08
COL6A1-202ENST00000463060 STARD6P59095 220 aa14.54□□□□□ -0.08
COL6A1-202ENST00000463060 RHOAP61586 193 aa14.54□□□□□ -0.08
COL6A1-202ENST00000463060 CCINQ13939 588 aa14.54□□□□□ -0.08
COL6A1-202ENST00000463060 TPSAB1Q15661 275 aa14.54□□□□□ -0.08
COL6A1-202ENST00000463060 HNRNPA1L2Q32P51 320 aaKnown RBP14.54□□□□□ -0.08
COL6A1-202ENST00000463060 CARD16Q5EG05 197 aa14.54□□□□□ -0.08
COL6A1-202ENST00000463060 ATXN7L2Q5T6C5 722 aaPredicted RBP14.54□□□□□ -0.08
COL6A1-202ENST00000463060 ANKRD22Q5VYY1 191 aa14.54□□□□□ -0.08
COL6A1-202ENST00000463060 IZUMO3Q5VZ72 239 aa14.54□□□□□ -0.08
COL6A1-202ENST00000463060 EGFLAMQ63HQ2 1017 aa14.54□□□□□ -0.08
COL6A1-202ENST00000463060 WDR93Q6P2C0 686 aa14.54□□□□□ -0.08
COL6A1-202ENST00000463060 NCEH1Q6PIU2 408 aa14.54□□□□□ -0.08
COL6A1-202ENST00000463060 TPRG1Q6ZUI0 275 aa14.54□□□□□ -0.08
COL6A1-202ENST00000463060 SRLQ86TD4 932 aa14.54□□□□□ -0.08
COL6A1-202ENST00000463060 IFT20Q8IY31 132 aa14.54□□□□□ -0.08
COL6A1-202ENST00000463060 UBALD2Q8IYN6 164 aa14.54□□□□□ -0.08
COL6A1-202ENST00000463060 GJD3Q8N144 294 aa14.54□□□□□ -0.08
COL6A1-202ENST00000463060 TAB3Q8N5C8 712 aaPredicted RBP14.54□□□□□ -0.08
COL6A1-202ENST00000463060 EIF1ADQ8N9N8 165 aaKnown RBP14.54□□□□□ -0.08
COL6A1-202ENST00000463060 OR2AP1Q8NGE2 309 aa14.54□□□□□ -0.08
COL6A1-202ENST00000463060 OR2A12Q8NGT7 310 aa14.54□□□□□ -0.08
COL6A1-202ENST00000463060 UCMAQ8WVF2 138 aa14.54□□□□□ -0.08
COL6A1-202ENST00000463060 FAM3CQ92520 227 aa14.54□□□□□ -0.08
COL6A1-202ENST00000463060 ART4Q93070 314 aa14.54□□□□□ -0.08
COL6A1-202ENST00000463060 EXOC4Q96A65 974 aa14.54□□□□□ -0.08
COL6A1-202ENST00000463060 ACOX2Q99424 681 aa14.54□□□□□ -0.08
COL6A1-202ENST00000463060 NOD2Q9HC29 1040 aa14.54□□□□□ -0.08
COL6A1-202ENST00000463060 EIF2B3Q9NR50 452 aaKnown RBP14.54□□□□□ -0.08
COL6A1-202ENST00000463060 VPS45Q9NRW7 570 aa14.54□□□□□ -0.08
COL6A1-202ENST00000463060 FAM114A2Q9NRY5 505 aa14.54□□□□□ -0.08
COL6A1-202ENST00000463060 TRIOO75962 3097 aa14.53□□□□□ -0.08
COL6A1-202ENST00000463060 AP2A1O95782 977 aa14.53□□□□□ -0.08
COL6A1-202ENST00000463060 MT-CYBP00156 380 aaPredicted RBP14.53□□□□□ -0.08
COL6A1-202ENST00000463060 NNMTP40261 264 aa14.53□□□□□ -0.08
COL6A1-202ENST00000463060 CD86P42081 329 aa14.53□□□□□ -0.08
COL6A1-202ENST00000463060 IL12RB1P42701 662 aa14.53□□□□□ -0.08
COL6A1-202ENST00000463060 ITGA8P53708 1063 aa14.53□□□□□ -0.08
COL6A1-202ENST00000463060 CDK16Q00536 496 aa14.53□□□□□ -0.08
COL6A1-202ENST00000463060 GRSF1Q12849 480 aaKnown RBP eCLIP14.53□□□□□ -0.08
COL6A1-202ENST00000463060 FZD5Q13467 585 aa14.53□□□□□ -0.08
COL6A1-202ENST00000463060 MORF4L2Q15014 288 aa14.53□□□□□ -0.08
COL6A1-202ENST00000463060 MYLK3Q32MK0 819 aa14.53□□□□□ -0.08
COL6A1-202ENST00000463060 C9orf64Q5T6V5 341 aa14.53□□□□□ -0.08
COL6A1-202ENST00000463060 CCNI2Q6ZMN8 369 aaPredicted RBP14.53□□□□□ -0.08
COL6A1-202ENST00000463060 PCGF5Q86SE9 256 aa14.53□□□□□ -0.08
COL6A1-202ENST00000463060 HOOK3Q86VS8 718 aa14.53□□□□□ -0.08
COL6A1-202ENST00000463060 PPIL6Q8IXY8 311 aa14.53□□□□□ -0.08
COL6A1-202ENST00000463060 PDCD7Q8N8D1 485 aaKnown RBP14.53□□□□□ -0.08
COL6A1-202ENST00000463060 BBOF1Q8ND07 529 aa14.53□□□□□ -0.08
COL6A1-202ENST00000463060 PRCCQ92733 491 aaPredicted RBP14.53□□□□□ -0.08
COL6A1-202ENST00000463060 EXOC2Q96KP1 924 aa14.53□□□□□ -0.08
COL6A1-202ENST00000463060 MRGPRX2Q96LB1 330 aa14.53□□□□□ -0.08
COL6A1-202ENST00000463060 PPP1R2P1Q96PQ5 205 aa14.53□□□□□ -0.08
COL6A1-202ENST00000463060 RBM15Q96T37 977 aaKnown RBP eCLIP14.53□□□□□ -0.08
COL6A1-202ENST00000463060 TM6SF2Q9BZW4 377 aa14.53□□□□□ -0.08
COL6A1-202ENST00000463060 NEUROG2Q9H2A3 272 aa14.53□□□□□ -0.08
COL6A1-202ENST00000463060 TNKS2Q9H2K2 1166 aa14.53□□□□□ -0.08
COL6A1-202ENST00000463060 MTG2Q9H4K7 406 aa14.53□□□□□ -0.08
COL6A1-202ENST00000463060 HAUS2Q9NVX0 235 aa14.53□□□□□ -0.08
COL6A1-202ENST00000463060 FAM153AQ9UHL3 310 aa14.53□□□□□ -0.08
COL6A1-202ENST00000463060 RAB21Q9UL25 225 aa14.53□□□□□ -0.08
COL6A1-202ENST00000463060 AAR2Q9Y312 384 aaKnown RBP14.53□□□□□ -0.08
COL6A1-202ENST00000463060 LOC285095A0A1B0GVY8 99 aa14.52□□□□□ -0.09
COL6A1-202ENST00000463060 ERI2A8K979 691 aaKnown RBP14.52□□□□□ -0.09
COL6A1-202ENST00000463060 F5H423 210 aaPredicted RBP14.52□□□□□ -0.09
COL6A1-202ENST00000463060 SMAPO00193 183 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms