RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 PPP1R12AO14974 1030 aaPredicted RBP11.02□□□□□ -0.65
CCDC12-204ENST00000460035 MATN3O15232 486 aa11.02□□□□□ -0.65
CCDC12-204ENST00000460035 MID1O15344 667 aa11.02□□□□□ -0.65
CCDC12-204ENST00000460035 RNASEH2AO75792 299 aaKnown RBP11.02□□□□□ -0.65
CCDC12-204ENST00000460035 TJP3O95049 919 aa11.02□□□□□ -0.65
CCDC12-204ENST00000460035 PEX11BO96011 259 aa11.02□□□□□ -0.65
CCDC12-204ENST00000460035 ADH1BP00325 375 aa11.02□□□□□ -0.65
CCDC12-204ENST00000460035 PRNPP04156 253 aa11.02□□□□□ -0.65
CCDC12-204ENST00000460035 PECAM1P16284 738 aaPredicted RBP11.02□□□□□ -0.65
CCDC12-204ENST00000460035 C5AR1P21730 350 aa11.02□□□□□ -0.65
CCDC12-204ENST00000460035 MSNP26038 577 aaKnown RBP11.02□□□□□ -0.65
CCDC12-204ENST00000460035 OXTRP30559 389 aa11.02□□□□□ -0.65
CCDC12-204ENST00000460035 GKP32189 559 aa11.02□□□□□ -0.65
CCDC12-204ENST00000460035 TPMTP51580 245 aa11.02□□□□□ -0.65
CCDC12-204ENST00000460035 RENBPP51606 427 aa11.02□□□□□ -0.65
CCDC12-204ENST00000460035 CCNHP51946 323 aaPredicted RBP11.02□□□□□ -0.65
CCDC12-204ENST00000460035 ZBTB16Q05516 673 aa11.02□□□□□ -0.65
CCDC12-204ENST00000460035 MAP7D1Q3KQU3 841 aa11.02□□□□□ -0.65
CCDC12-204ENST00000460035 SEL1L2Q5TEA6 688 aa11.02□□□□□ -0.65
CCDC12-204ENST00000460035 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.02□□□□□ -0.65
CCDC12-204ENST00000460035 SRLQ86TD4 932 aa11.02□□□□□ -0.65
CCDC12-204ENST00000460035 HDDC3Q8N4P3 179 aa11.02□□□□□ -0.65
CCDC12-204ENST00000460035 DEFB119Q8N690 84 aa11.02□□□□□ -0.65
CCDC12-204ENST00000460035 PAF1Q8N7H5 531 aa11.02□□□□□ -0.65
CCDC12-204ENST00000460035 TSEN2Q8NCE0 465 aaKnown RBP11.02□□□□□ -0.65
CCDC12-204ENST00000460035 TMIEQ8NEW7 156 aa11.02□□□□□ -0.65
CCDC12-204ENST00000460035 HDAC11Q96DB2 347 aa11.02□□□□□ -0.65
CCDC12-204ENST00000460035 EXOC2Q96KP1 924 aa11.02□□□□□ -0.65
CCDC12-204ENST00000460035 OLFM3Q96PB7 478 aa11.02□□□□□ -0.65
CCDC12-204ENST00000460035 PABPC3Q9H361 631 aaKnown RBP11.02□□□□□ -0.65
CCDC12-204ENST00000460035 CD93Q9NPY3 652 aa11.02□□□□□ -0.65
CCDC12-204ENST00000460035 DYRK4Q9NR20 520 aa11.02□□□□□ -0.65
CCDC12-204ENST00000460035 RBM22Q9NW64 420 aaKnown RBP eCLIP11.02□□□□□ -0.651e-7■■■■■ 31.6
CCDC12-204ENST00000460035 SEPT10Q9P0V9 454 aa11.02□□□□□ -0.65
CCDC12-204ENST00000460035 USP36Q9P275 1121 aaKnown RBP11.02□□□□□ -0.65
CCDC12-204ENST00000460035 LHX3Q9UBR4 397 aa11.02□□□□□ -0.65
CCDC12-204ENST00000460035 SCML1Q9UN30 329 aa11.02□□□□□ -0.65
CCDC12-204ENST00000460035 CABIN1Q9Y6J0 2220 aa11.01□□□□□ -0.65
CCDC12-204ENST00000460035 TTC24A2A3L6 582 aaPredicted RBP11.01□□□□□ -0.65
CCDC12-204ENST00000460035 H7C0C1 242 aa11.01□□□□□ -0.65
CCDC12-204ENST00000460035 PLK4O00444 970 aa11.01□□□□□ -0.65
CCDC12-204ENST00000460035 ENC1O14682 589 aa11.01□□□□□ -0.65
CCDC12-204ENST00000460035 INSIG1O15503 277 aa11.01□□□□□ -0.65
CCDC12-204ENST00000460035 LEFTY1O75610 366 aa11.01□□□□□ -0.65
CCDC12-204ENST00000460035 JCHAINP01591 159 aa11.01□□□□□ -0.65
CCDC12-204ENST00000460035 IGLV3-19P01714 112 aa11.01□□□□□ -0.65
CCDC12-204ENST00000460035 CTSLP07711 333 aa11.01□□□□□ -0.65
CCDC12-204ENST00000460035 CCNB1P14635 433 aa11.01□□□□□ -0.65
CCDC12-204ENST00000460035 CD6P30203 668 aa11.01□□□□□ -0.65
CCDC12-204ENST00000460035 P2RY2P41231 377 aa11.01□□□□□ -0.65
CCDC12-204ENST00000460035 MMP13P45452 471 aa11.01□□□□□ -0.65
CCDC12-204ENST00000460035 ATP5OP48047 213 aa11.01□□□□□ -0.65
CCDC12-204ENST00000460035 SCNN1BP51168 640 aa11.01□□□□□ -0.65
CCDC12-204ENST00000460035 METAP1P53582 386 aa11.01□□□□□ -0.65
CCDC12-204ENST00000460035 ZNF33AQ06730 810 aa11.01□□□□□ -0.65
CCDC12-204ENST00000460035 PPIDQ08752 370 aaKnown RBP11.01□□□□□ -0.65
CCDC12-204ENST00000460035 NSUN2Q08J23 767 aaKnown RBP eCLIP11.01□□□□□ -0.65
CCDC12-204ENST00000460035 HNRNPDQ14103 355 aaKnown RBP11.01□□□□□ -0.65
CCDC12-204ENST00000460035 LPAL2Q16609 132 aa11.01□□□□□ -0.65
CCDC12-204ENST00000460035 DCAF12L1Q5VU92 463 aa11.01□□□□□ -0.65
CCDC12-204ENST00000460035 SLC36A4Q6YBV0 504 aa11.01□□□□□ -0.65
CCDC12-204ENST00000460035 ZC3H18Q86VM9 953 aaKnown RBP11.01□□□□□ -0.65
CCDC12-204ENST00000460035 SLC35F6Q8N357 371 aa11.01□□□□□ -0.65
CCDC12-204ENST00000460035 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.01□□□□□ -0.65
CCDC12-204ENST00000460035 TFB1MQ8WVM0 346 aaKnown RBP11.01□□□□□ -0.65
CCDC12-204ENST00000460035 TOE1Q96GM8 510 aaKnown RBP11.01□□□□□ -0.65
CCDC12-204ENST00000460035 PSKH2Q96QS6 385 aa11.01□□□□□ -0.65
CCDC12-204ENST00000460035 HERPUD2Q9BSE4 406 aa11.01□□□□□ -0.65
CCDC12-204ENST00000460035 TLR10Q9BXR5 811 aa11.01□□□□□ -0.65
CCDC12-204ENST00000460035 BRD8Q9H0E9 1235 aa11.01□□□□□ -0.65
CCDC12-204ENST00000460035 NEUROG2Q9H2A3 272 aa11.01□□□□□ -0.65
CCDC12-204ENST00000460035 NT5MQ9NPB1 228 aa11.01□□□□□ -0.65
CCDC12-204ENST00000460035 RAB23Q9ULC3 237 aa11.01□□□□□ -0.65
CCDC12-204ENST00000460035 TTLL3Q9Y4R7 772 aa11.01□□□□□ -0.65
CCDC12-204ENST00000460035 WASF2Q9Y6W5 498 aa11.01□□□□□ -0.65
CCDC12-204ENST00000460035 ADAMTS9Q9P2N4 1935 aa11□□□□□ -0.65
CCDC12-204ENST00000460035 PTPRZ1P23471 2315 aaPredicted RBP11□□□□□ -0.65
CCDC12-204ENST00000460035 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11□□□□□ -0.65
CCDC12-204ENST00000460035 IGHV1OR15-9A0A0B4J2B8 117 aa11□□□□□ -0.65
CCDC12-204ENST00000460035 FAM47DPA6NHR8 397 aa11□□□□□ -0.65
CCDC12-204ENST00000460035 APOC4-APOC2K7ER74 178 aa11□□□□□ -0.65
CCDC12-204ENST00000460035 KCNK1O00180 336 aa11□□□□□ -0.65
CCDC12-204ENST00000460035 RNF103O00237 685 aa11□□□□□ -0.65
CCDC12-204ENST00000460035 MUSKO15146 869 aa11□□□□□ -0.65
CCDC12-204ENST00000460035 CEP104O60308 925 aa11□□□□□ -0.65
CCDC12-204ENST00000460035 APOC2P02655 101 aa11□□□□□ -0.65
CCDC12-204ENST00000460035 UGT2B4P06133 528 aa11□□□□□ -0.65
CCDC12-204ENST00000460035 BCKDHBP21953 392 aa11□□□□□ -0.65
CCDC12-204ENST00000460035 HSPA9P38646 679 aaKnown RBP11□□□□□ -0.65
CCDC12-204ENST00000460035 RGRP47804 291 aa11□□□□□ -0.65
CCDC12-204ENST00000460035 CSNK1DP48730 415 aa11□□□□□ -0.65
CCDC12-204ENST00000460035 MAXP61244 160 aa11□□□□□ -0.65
CCDC12-204ENST00000460035 GNG11P61952 73 aa11□□□□□ -0.65
CCDC12-204ENST00000460035 RPL6Q02878 288 aaKnown RBP11□□□□□ -0.65
CCDC12-204ENST00000460035 CCDC15Q0P6D6 951 aa11□□□□□ -0.65
CCDC12-204ENST00000460035 CNTN1Q12860 1018 aa11□□□□□ -0.65
CCDC12-204ENST00000460035 DARS2Q6PI48 645 aaKnown RBP11□□□□□ -0.65
CCDC12-204ENST00000460035 GDPD4Q6W3E5 623 aa11□□□□□ -0.65
CCDC12-204ENST00000460035 USP30Q70CQ3 517 aa11□□□□□ -0.65
CCDC12-204ENST00000460035 LPCAT2Q7L5N7 544 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms