RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 CCDC114Q96M63 670 aa16.26■□□□□ 0.19
USP39-205ENST00000442708 GDAP1L1Q96MZ0 367 aa16.26■□□□□ 0.19
USP39-205ENST00000442708 PSKH2Q96QS6 385 aa16.26■□□□□ 0.19
USP39-205ENST00000442708 FAM118BQ9BPY3 351 aa16.26■□□□□ 0.19
USP39-205ENST00000442708 CINPQ9BW66 212 aaPredicted RBP16.26■□□□□ 0.19
USP39-205ENST00000442708 DUSP15Q9H1R2 295 aaPredicted RBP16.26■□□□□ 0.19
USP39-205ENST00000442708 NEUROG2Q9H2A3 272 aa16.26■□□□□ 0.19
USP39-205ENST00000442708 EPC1Q9H2F5 836 aa16.26■□□□□ 0.19
USP39-205ENST00000442708 WSB2Q9NYS7 404 aaPredicted RBP16.26■□□□□ 0.19
USP39-205ENST00000442708 FARP1Q9Y4F1 1045 aaPredicted RBP16.26■□□□□ 0.19
USP39-205ENST00000442708 KCNK1O00180 336 aa16.25■□□□□ 0.19
USP39-205ENST00000442708 POP4O95707 220 aaKnown RBP16.25■□□□□ 0.19
USP39-205ENST00000442708 IGSF6O95976 241 aa16.25■□□□□ 0.19
USP39-205ENST00000442708 C5AR1P21730 350 aa16.25■□□□□ 0.19
USP39-205ENST00000442708 ACSL1P33121 698 aa16.25■□□□□ 0.19
USP39-205ENST00000442708 NR2C2P49116 596 aa16.25■□□□□ 0.19
USP39-205ENST00000442708 MAXP61244 160 aa16.25■□□□□ 0.19
USP39-205ENST00000442708 CNTN1Q12860 1018 aa16.25■□□□□ 0.19
USP39-205ENST00000442708 ZBTB17Q13105 803 aa16.25■□□□□ 0.19
USP39-205ENST00000442708 SIM2Q14190 667 aaPredicted RBP16.25■□□□□ 0.19
USP39-205ENST00000442708 IHHQ14623 411 aa16.25■□□□□ 0.19
USP39-205ENST00000442708 PDK1Q15118 436 aa16.25■□□□□ 0.19
USP39-205ENST00000442708 PRKD1Q15139 912 aaPredicted RBP16.25■□□□□ 0.19
USP39-205ENST00000442708 PLK5Q496M5 336 aa16.25■□□□□ 0.19
USP39-205ENST00000442708 ZNF569Q5MCW4 686 aa16.25■□□□□ 0.19
USP39-205ENST00000442708 MARC1Q5VT66 337 aa16.25■□□□□ 0.19
USP39-205ENST00000442708 DSG4Q86SJ6 1040 aa16.25■□□□□ 0.19
USP39-205ENST00000442708 SRLQ86TD4 932 aa16.25■□□□□ 0.19
USP39-205ENST00000442708 CCDC13Q8IYE1 715 aa16.25■□□□□ 0.19
USP39-205ENST00000442708 SLC35F6Q8N357 371 aa16.25■□□□□ 0.19
USP39-205ENST00000442708 C17orf53Q8N3J3 647 aaPredicted RBP16.25■□□□□ 0.19
USP39-205ENST00000442708 HDDC3Q8N4P3 179 aa16.25■□□□□ 0.19
USP39-205ENST00000442708 DEFB119Q8N690 84 aa16.25■□□□□ 0.19
USP39-205ENST00000442708 SUMF1Q8NBK3 374 aa16.25■□□□□ 0.19
USP39-205ENST00000442708 P3H4Q92791 437 aa16.25■□□□□ 0.19
USP39-205ENST00000442708 FATE1Q969F0 183 aa16.25■□□□□ 0.19
USP39-205ENST00000442708 FAM131CQ96AQ9 280 aa16.25■□□□□ 0.19
USP39-205ENST00000442708 TOE1Q96GM8 510 aaKnown RBP16.25■□□□□ 0.19
USP39-205ENST00000442708 C10orf88Q9H8K7 445 aa16.25■□□□□ 0.19
USP39-205ENST00000442708 FBXL12Q9NXK8 326 aa16.25■□□□□ 0.19
USP39-205ENST00000442708 SEPT3Q9UH03 358 aa16.25■□□□□ 0.19
USP39-205ENST00000442708 R3HDM2Q9Y2K5 976 aaKnown RBP16.25■□□□□ 0.19
USP39-205ENST00000442708 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.24■□□□□ 0.19
USP39-205ENST00000442708 C1QTNF3-AMACRE9PGA6 284 aa16.24■□□□□ 0.19
USP39-205ENST00000442708 APOC4-APOC2K7ER74 178 aa16.24■□□□□ 0.19
USP39-205ENST00000442708 KPNA3O00505 521 aaPredicted RBP16.24■□□□□ 0.19
USP39-205ENST00000442708 ENC1O14682 589 aa16.24■□□□□ 0.19
USP39-205ENST00000442708 RNASEH2AO75792 299 aaKnown RBP16.24■□□□□ 0.19
USP39-205ENST00000442708 PIGNO95427 931 aa16.24■□□□□ 0.19
USP39-205ENST00000442708 APOC2P02655 101 aa16.24■□□□□ 0.19
USP39-205ENST00000442708 PRNPP04156 253 aa16.24■□□□□ 0.19
USP39-205ENST00000442708 CCNB1P14635 433 aa16.24■□□□□ 0.19
USP39-205ENST00000442708 CR2P20023 1033 aa16.24■□□□□ 0.19
USP39-205ENST00000442708 CD6P30203 668 aa16.24■□□□□ 0.19
USP39-205ENST00000442708 MMP13P45452 471 aa16.24■□□□□ 0.19
USP39-205ENST00000442708 CSNK1DP48730 415 aa16.24■□□□□ 0.19
USP39-205ENST00000442708 NSUN2Q08J23 767 aaKnown RBP eCLIP16.24■□□□□ 0.19
USP39-205ENST00000442708 AP1B1Q10567 949 aa16.24■□□□□ 0.19
USP39-205ENST00000442708 KLF1Q13351 362 aaPredicted RBP16.24■□□□□ 0.19
USP39-205ENST00000442708 HNRNPDQ14103 355 aaKnown RBP16.24■□□□□ 0.19
USP39-205ENST00000442708 ZNF235Q14590 738 aa16.24■□□□□ 0.19
USP39-205ENST00000442708 NOMO1Q15155 1222 aa16.24■□□□□ 0.19
USP39-205ENST00000442708 TTC31Q49AM3 519 aaPredicted RBP16.24■□□□□ 0.19
USP39-205ENST00000442708 TIGD7Q6NT04 549 aaPredicted RBP16.24■□□□□ 0.19
USP39-205ENST00000442708 PRR23BQ6ZRT6 265 aa16.24■□□□□ 0.19
USP39-205ENST00000442708 USP30Q70CQ3 517 aa16.24■□□□□ 0.19
USP39-205ENST00000442708 CEP68Q76N32 757 aa16.24■□□□□ 0.19
USP39-205ENST00000442708 ZC3H18Q86VM9 953 aaKnown RBP16.24■□□□□ 0.19
USP39-205ENST00000442708 TMEFF1Q8IYR6 380 aa16.24■□□□□ 0.19
USP39-205ENST00000442708 CNTD1Q8N815 330 aa16.24■□□□□ 0.19
USP39-205ENST00000442708 ACTL9Q8TC94 416 aa16.24■□□□□ 0.19
USP39-205ENST00000442708 GANCQ8TET4 914 aa16.24■□□□□ 0.19
USP39-205ENST00000442708 ZC3H10Q96K80 434 aaKnown RBP16.24■□□□□ 0.19
USP39-205ENST00000442708 MGME1Q9BQP7 344 aa16.24■□□□□ 0.19
USP39-205ENST00000442708 CEP41Q9BYV8 373 aa16.24■□□□□ 0.19
USP39-205ENST00000442708 NT5MQ9NPB1 228 aa16.24■□□□□ 0.19
USP39-205ENST00000442708 SCML1Q9UN30 329 aa16.24■□□□□ 0.19
USP39-205ENST00000442708 SDK1Q7Z5N4 2213 aa16.24■□□□□ 0.19
USP39-205ENST00000442708 MYO15AQ9UKN7 3530 aa16.24■□□□□ 0.19
USP39-205ENST00000442708 DOCK9Q9BZ29 2069 aa16.23■□□□□ 0.19
USP39-205ENST00000442708 PROB1E7EW31 1015 aa16.23■□□□□ 0.19
USP39-205ENST00000442708 KCNK3O14649 394 aa16.23■□□□□ 0.19
USP39-205ENST00000442708 JCHAINP01591 159 aa16.23■□□□□ 0.19
USP39-205ENST00000442708 HLA-DQB2P05538 268 aa16.23■□□□□ 0.19
USP39-205ENST00000442708 UGT2B4P06133 528 aa16.23■□□□□ 0.19
USP39-205ENST00000442708 SCNN1BP51168 640 aa16.23■□□□□ 0.19
USP39-205ENST00000442708 RENBPP51606 427 aa16.23■□□□□ 0.19
USP39-205ENST00000442708 TAS2R38P59533 333 aa16.23■□□□□ 0.19
USP39-205ENST00000442708 IFI35P80217 286 aaPredicted RBP16.23■□□□□ 0.19
USP39-205ENST00000442708 OTUD4Q01804 1114 aaKnown RBP16.23■□□□□ 0.19
USP39-205ENST00000442708 BYSLQ13895 437 aaKnown RBP16.23■□□□□ 0.19
USP39-205ENST00000442708 PIP5KL1Q5T9C9 394 aa16.23■□□□□ 0.19
USP39-205ENST00000442708 AGBL4Q5VU57 503 aa16.23■□□□□ 0.19
USP39-205ENST00000442708 FAM46CQ5VWP2 391 aa16.23■□□□□ 0.19
USP39-205ENST00000442708 PMS2CLQ68D20 193 aa16.23■□□□□ 0.19
USP39-205ENST00000442708 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.23■□□□□ 0.19
USP39-205ENST00000442708 PARS2Q7L3T8 475 aaKnown RBP16.23■□□□□ 0.19
USP39-205ENST00000442708 SPACA7Q96KW9 195 aa16.23■□□□□ 0.19
USP39-205ENST00000442708 KLHL32Q96NJ5 620 aa16.23■□□□□ 0.19
USP39-205ENST00000442708 IL12RB2Q99665 862 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms