RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 ZNF839A8K0R7 811 aa17■□□□□ 0.31
PMS1-213ENST00000441310 C9IYK1 514 aa17■□□□□ 0.31
PMS1-213ENST00000441310 NRP1O14786 923 aa17■□□□□ 0.31
PMS1-213ENST00000441310 CHRNGP07510 517 aa17■□□□□ 0.31
PMS1-213ENST00000441310 F7P08709 466 aaPredicted RBP17■□□□□ 0.31
PMS1-213ENST00000441310 MATN1P21941 496 aa17■□□□□ 0.31
PMS1-213ENST00000441310 TYK2P29597 1187 aa17■□□□□ 0.31
PMS1-213ENST00000441310 OPRL1P41146 370 aa17■□□□□ 0.31
PMS1-213ENST00000441310 PRKCQQ04759 706 aa17■□□□□ 0.31
PMS1-213ENST00000441310 GPR162Q16538 588 aa17■□□□□ 0.31
PMS1-213ENST00000441310 ZNF699Q32M78 642 aa17■□□□□ 0.31
PMS1-213ENST00000441310 CBR4Q8N4T8 237 aa17■□□□□ 0.31
PMS1-213ENST00000441310 SERBP1Q8NC51 408 aaKnown RBP eCLIP17■□□□□ 0.31
PMS1-213ENST00000441310 GPRC5AQ8NFJ5 357 aa17■□□□□ 0.31
PMS1-213ENST00000441310 EFHD2Q96C19 240 aaPredicted RBP17■□□□□ 0.31
PMS1-213ENST00000441310 APBA2Q99767 749 aa17■□□□□ 0.31
PMS1-213ENST00000441310 CPSF3Q9UKF6 684 aaKnown RBP17■□□□□ 0.31
PMS1-213ENST00000441310 TCRBV5S1A1TA0A578 114 aa17■□□□□ 0.31
PMS1-213ENST00000441310 TRIM64CA6NLI5 447 aa17■□□□□ 0.31
PMS1-213ENST00000441310 PLPPR4Q7Z2D5 763 aa17■□□□□ 0.31
PMS1-213ENST00000441310 CMC1Q7Z7K0 106 aa17■□□□□ 0.31
PMS1-213ENST00000441310 CDT1Q9H211 546 aa17■□□□□ 0.31
PMS1-213ENST00000441310 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17■□□□□ 0.31
PMS1-213ENST00000441310 PAK5Q9P286 719 aa17■□□□□ 0.31
PMS1-213ENST00000441310 PSAT1Q9Y617 370 aa17■□□□□ 0.31
PMS1-213ENST00000441310 DGKBQ9Y6T7 804 aa17■□□□□ 0.31
PMS1-213ENST00000441310 FAM149AA5PLN7 773 aa17■□□□□ 0.31
PMS1-213ENST00000441310 CLPXO76031 633 aa17■□□□□ 0.31
PMS1-213ENST00000441310 LGALS2P05162 132 aa17■□□□□ 0.31
PMS1-213ENST00000441310 NFICP08651 508 aa17■□□□□ 0.31
PMS1-213ENST00000441310 HOXC6P09630 235 aa17■□□□□ 0.31
PMS1-213ENST00000441310 RBL1P28749 1068 aa17■□□□□ 0.31
PMS1-213ENST00000441310 HPCAL1P37235 193 aa17■□□□□ 0.31
PMS1-213ENST00000441310 BFSP2Q13515 415 aa17■□□□□ 0.31
PMS1-213ENST00000441310 MPZL3Q6UWV2 235 aa17■□□□□ 0.31
PMS1-213ENST00000441310 RNF19BQ6ZMZ0 732 aa17■□□□□ 0.31
PMS1-213ENST00000441310 TIFABQ6ZNK6 161 aa17■□□□□ 0.31
PMS1-213ENST00000441310 DSG4Q86SJ6 1040 aa17■□□□□ 0.31
PMS1-213ENST00000441310 WDR49Q8IV35 697 aa17■□□□□ 0.31
PMS1-213ENST00000441310 EBNA1BP2Q99848 306 aaKnown RBP17■□□□□ 0.31
PMS1-213ENST00000441310 MROQ9BYG7 248 aa17■□□□□ 0.31
PMS1-213ENST00000441310 PCDH12Q9NPG4 1184 aa17■□□□□ 0.31
PMS1-213ENST00000441310 CCL15-CCL14A0A0B4J2E2 113 aa16.99■□□□□ 0.31
PMS1-213ENST00000441310 IGKV6-21A0A0C4DH24 114 aa16.99■□□□□ 0.31
PMS1-213ENST00000441310 ACKR2O00590 384 aa16.99■□□□□ 0.31
PMS1-213ENST00000441310 HBP1O60381 514 aa16.99■□□□□ 0.31
PMS1-213ENST00000441310 TPST1O60507 370 aa16.99■□□□□ 0.31
PMS1-213ENST00000441310 TBXAS1P24557 533 aaPredicted RBP16.99■□□□□ 0.31
PMS1-213ENST00000441310 EEF1DP29692 281 aaKnown RBP16.99■□□□□ 0.31
PMS1-213ENST00000441310 RHDQ02161 417 aa16.99■□□□□ 0.31
PMS1-213ENST00000441310 ARHGAP1Q07960 439 aa16.99■□□□□ 0.31
PMS1-213ENST00000441310 SELENBP1Q13228 472 aa16.99■□□□□ 0.31
PMS1-213ENST00000441310 TRIM25Q14258 630 aaKnown RBP16.99■□□□□ 0.31
PMS1-213ENST00000441310 CCL15Q16663 113 aa16.99■□□□□ 0.31
PMS1-213ENST00000441310 BPIFB6Q8NFQ5 453 aa16.99■□□□□ 0.31
PMS1-213ENST00000441310 ASB9Q96DX5 294 aa16.99■□□□□ 0.31
PMS1-213ENST00000441310 SIGLEC10Q96LC7 697 aa16.99■□□□□ 0.31
PMS1-213ENST00000441310 ADI1Q9BV57 179 aa16.99■□□□□ 0.31
PMS1-213ENST00000441310 TDRD1Q9BXT4 1180 aaKnown RBP16.99■□□□□ 0.31
PMS1-213ENST00000441310 MUC3BQ9H195 1237 aa16.99■□□□□ 0.31
PMS1-213ENST00000441310 NANOGQ9H9S0 305 aa16.99■□□□□ 0.31
PMS1-213ENST00000441310 ERAP1Q9NZ08 941 aa16.99■□□□□ 0.31
PMS1-213ENST00000441310 PTBP2Q9UKA9 531 aaKnown RBP16.99■□□□□ 0.31
PMS1-213ENST00000441310 B3GNT3Q9Y2A9 372 aa16.99■□□□□ 0.31
PMS1-213ENST00000441310 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.99■□□□□ 0.31
PMS1-213ENST00000441310 FAM155AB1AL88 458 aaPredicted RBP16.99■□□□□ 0.31
PMS1-213ENST00000441310 E7ENX8 843 aa16.99■□□□□ 0.31
PMS1-213ENST00000441310 CHEK2O96017 543 aa16.99■□□□□ 0.31
PMS1-213ENST00000441310 TFE3P19532 575 aaPredicted RBP16.99■□□□□ 0.31
PMS1-213ENST00000441310 TTKP33981 857 aa16.99■□□□□ 0.31
PMS1-213ENST00000441310 PSME3P61289 254 aa16.99■□□□□ 0.31
PMS1-213ENST00000441310 ADAMTS16Q8TE57 1224 aa16.99■□□□□ 0.31
PMS1-213ENST00000441310 SEPT3Q9UH03 358 aa16.99■□□□□ 0.31
PMS1-213ENST00000441310 KRT75O95678 551 aa16.98■□□□□ 0.31
PMS1-213ENST00000441310 KRT3P12035 628 aa16.98■□□□□ 0.31
PMS1-213ENST00000441310 NOMO1Q15155 1222 aa16.98■□□□□ 0.31
PMS1-213ENST00000441310 EML3Q32P44 896 aa16.98■□□□□ 0.31
PMS1-213ENST00000441310 FAM209AQ5JX71 171 aa16.98■□□□□ 0.31
PMS1-213ENST00000441310 DPP9Q86TI2 863 aa16.98■□□□□ 0.31
PMS1-213ENST00000441310 ZNF354CQ86Y25 554 aa16.98■□□□□ 0.31
PMS1-213ENST00000441310 ZC3H15Q8WU90 426 aaKnown RBP16.98■□□□□ 0.31
PMS1-213ENST00000441310 IPO11Q9UI26 975 aaKnown RBP16.98■□□□□ 0.31
PMS1-213ENST00000441310 NOTOA8MTQ0 251 aa16.98■□□□□ 0.31
PMS1-213ENST00000441310 RAD23AP54725 363 aa16.98■□□□□ 0.31
PMS1-213ENST00000441310 MBTD1Q05BQ5 628 aa16.98■□□□□ 0.31
PMS1-213ENST00000441310 NDUFA5Q16718 116 aa16.98■□□□□ 0.31
PMS1-213ENST00000441310 STXBP5Q5T5C0 1151 aa16.98■□□□□ 0.31
PMS1-213ENST00000441310 GK5Q6ZS86 529 aa16.98■□□□□ 0.31
PMS1-213ENST00000441310 TERB1Q8NA31 727 aa16.98■□□□□ 0.31
PMS1-213ENST00000441310 TMEM35BQ8NCS4 154 aa16.98■□□□□ 0.31
PMS1-213ENST00000441310 PDZD8Q8NEN9 1154 aa16.98■□□□□ 0.31
PMS1-213ENST00000441310 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.98■□□□□ 0.31
PMS1-213ENST00000441310 NIF3L1Q9GZT8 377 aa16.98■□□□□ 0.31
PMS1-213ENST00000441310 RPF1Q9H9Y2 349 aaKnown RBP16.98■□□□□ 0.31
PMS1-213ENST00000441310 TRAF6Q9Y4K3 522 aa16.98■□□□□ 0.31
PMS1-213ENST00000441310 SNX9Q9Y5X1 595 aa16.98■□□□□ 0.31
PMS1-213ENST00000441310 RNF103-CHMP3A0A140T963 221 aa16.98■□□□□ 0.31
PMS1-213ENST00000441310 KCNU1A8MYU2 1149 aa16.98■□□□□ 0.31
PMS1-213ENST00000441310 C22orf31O95567 290 aa16.98■□□□□ 0.31
PMS1-213ENST00000441310 TNNC2P02585 160 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms