RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 RAD51AP1Q96B01 352 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 ZNF514Q96K75 400 aaPredicted RBP5.43□□□□□ -1.54
PTPN4-203ENST00000430976 SLC22A4Q9H015 551 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 SLC26A1Q9H2B4 701 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 TTYH1Q9H313 450 aaPredicted RBP5.43□□□□□ -1.54
PTPN4-203ENST00000430976 WDR55Q9H6Y2 383 aaPredicted RBP5.43□□□□□ -1.54
PTPN4-203ENST00000430976 MVB12BQ9H7P6 319 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 NIT2Q9NQR4 276 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 RASSF1Q9NS23 344 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 DDX19AQ9NUU7 478 aaKnown RBP5.43□□□□□ -1.54
PTPN4-203ENST00000430976 TMEM260Q9NX78 707 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 DDX43Q9NXZ2 648 aaKnown RBP5.43□□□□□ -1.54
PTPN4-203ENST00000430976 EIF3KQ9UBQ5 218 aaKnown RBP5.43□□□□□ -1.54
PTPN4-203ENST00000430976 C19orf53Q9UNZ5 99 aaPredicted RBP5.43□□□□□ -1.54
PTPN4-203ENST00000430976 PPP2R2CQ9Y2T4 447 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 CLCA3PQ9Y6N3 262 aa5.43□□□□□ -1.54
PTPN4-203ENST00000430976 NCOA3Q9Y6Q9 1424 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 ILVBLA1L0T0 632 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 I3L4J1 428 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 AURKAO14965 403 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 VILLO15195 856 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 CALUO43852 315 aaPredicted RBP5.42□□□□□ -1.54
PTPN4-203ENST00000430976 CIAO1O76071 339 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 PCDH8O95206 1070 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 SBK2P0C263 348 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 ADRA1DP25100 572 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 SPAM1P38567 509 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 BTDP43251 543 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 HTR3AP46098 478 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 C21orf59P57076 290 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 ERVFC1P60507 584 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 LMAN2Q12907 356 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 GPS1Q13098 491 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 ARHGAP19Q14CB8 494 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 GPR68Q15743 365 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 PHKG1Q16816 387 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 TXNRD1Q16881 649 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 CTXN3Q4LDR2 81 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 C18orf63Q68DL7 685 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 KCNT2Q6UVM3 1135 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 THNSL1Q8IYQ7 743 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 ZFP82Q8N141 532 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 FBXL16Q8N461 479 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 C1orf52Q8N6N3 182 aaKnown RBP5.42□□□□□ -1.54
PTPN4-203ENST00000430976 OR5T1Q8NG75 326 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 BORCS5Q969J3 196 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 GTPBP3Q969Y2 492 aaKnown RBP5.42□□□□□ -1.54
PTPN4-203ENST00000430976 JPH4Q96JJ6 628 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 LENG8Q96PV6 779 aaPredicted RBP5.42□□□□□ -1.54
PTPN4-203ENST00000430976 TGS1Q96RS0 853 aaKnown RBP5.42□□□□□ -1.54
PTPN4-203ENST00000430976 RIT2Q99578 217 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 C17orf62Q9BQA9 187 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 FAM83CQ9BQN1 747 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 OSBPL8Q9BZF1 889 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 ANKZF1Q9H8Y5 726 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 TRPV4Q9HBA0 871 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 SRA1Q9HD15 236 aaKnown RBP5.42□□□□□ -1.54
PTPN4-203ENST00000430976 KLHL1Q9NR64 748 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 FAM212BQ9NTI7 297 aaPredicted RBP5.42□□□□□ -1.54
PTPN4-203ENST00000430976 TMLHEQ9NVH6 421 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 ARL8BQ9NVJ2 186 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.42□□□□□ -1.54
PTPN4-203ENST00000430976 ARHGAP20Q9P2F6 1191 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 POLLQ9UGP5 575 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 KCNJ14Q9UNX9 436 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 TOP2AP11388 1531 aaKnown RBP5.42□□□□□ -1.54
PTPN4-203ENST00000430976 A0A075B6Q4 140 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 A0A087X0B3 334 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 RNF103-CHMP3A0A140T963 221 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 A4D1N5 150 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 ARHGEF35A5YM69 484 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 POM121BA6NF01 834 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 CCDC154A6NI56 674 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 AQP12BA6NM10 295 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 KPNA3O00505 521 aaPredicted RBP5.42□□□□□ -1.54
PTPN4-203ENST00000430976 CUTAO60888 179 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 LGI1O95970 557 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 LYNP07948 512 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 ERCC1P07992 297 aaPredicted RBP5.42□□□□□ -1.54
PTPN4-203ENST00000430976 BMP2P12643 396 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 CYP4B1P13584 511 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 NR1D1P20393 614 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 PDCP20941 246 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 ATP6V1C1P21283 382 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 CMA1P23946 247 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 RRM2P31350 389 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 MPIP34949 423 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 THPOP40225 353 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 PIP4K2AP48426 406 aaPredicted RBP5.42□□□□□ -1.54
PTPN4-203ENST00000430976 MLF1P58340 268 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 CREMQ03060 361 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 PTPN12Q05209 780 aaKnown RBP5.42□□□□□ -1.54
PTPN4-203ENST00000430976 PWP1Q13610 501 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 PIGHQ14442 188 aaPredicted RBP5.42□□□□□ -1.54
PTPN4-203ENST00000430976 PDK2Q15119 407 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 CEBPEQ15744 281 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 NPTX1Q15818 432 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 SPRED3Q2MJR0 410 aa5.42□□□□□ -1.54
PTPN4-203ENST00000430976 AASDHQ4L235 1098 aaPredicted RBP5.42□□□□□ -1.54
PTPN4-203ENST00000430976 RNFT1Q5M7Z0 435 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms