RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 ZKSCAN8Q15776 578 aaPredicted RBP26.85■■□□□ 1.89
LDB1-202ENST00000425280 ELMOD1Q8N336 334 aa26.85■■□□□ 1.89
LDB1-202ENST00000425280 SPPL3Q8TCT6 385 aa26.85■■□□□ 1.89
LDB1-202ENST00000425280 FAM111AQ96PZ2 611 aa26.85■■□□□ 1.89
LDB1-202ENST00000425280 PCMTD2Q9NV79 361 aa26.85■■□□□ 1.89
LDB1-202ENST00000425280 GGA2Q9UJY4 613 aa26.85■■□□□ 1.89
LDB1-202ENST00000425280 DHRS4L1P0CG22 281 aa26.85■■□□□ 1.89
LDB1-202ENST00000425280 STRA8Q7Z7C7 330 aa26.85■■□□□ 1.89
LDB1-202ENST00000425280 SLC22A17Q8WUG5 538 aa26.85■■□□□ 1.89
LDB1-202ENST00000425280 POF1BQ8WVV4 589 aa26.85■■□□□ 1.89
LDB1-202ENST00000425280 SPOCK2Q92563 424 aa26.85■■□□□ 1.89
LDB1-202ENST00000425280 ACE2Q9BYF1 805 aaPredicted RBP26.85■■□□□ 1.89
LDB1-202ENST00000425280 PRKAG3Q9UGI9 489 aa26.85■■□□□ 1.89
LDB1-202ENST00000425280 GFRA2O00451 464 aa26.84■■□□□ 1.89
LDB1-202ENST00000425280 ALDOAP04075 364 aaKnown RBP26.84■■□□□ 1.89
LDB1-202ENST00000425280 PDPK2PQ6A1A2 396 aa26.84■■□□□ 1.89
LDB1-202ENST00000425280 NDUFAF2Q8N183 169 aa26.84■■□□□ 1.89
LDB1-202ENST00000425280 RBBP8Q99708 897 aa26.84■■□□□ 1.89
LDB1-202ENST00000425280 SLC13A1Q9BZW2 595 aa26.84■■□□□ 1.89
LDB1-202ENST00000425280 IARS2Q9NSE4 1012 aaKnown RBP26.84■■□□□ 1.89
LDB1-202ENST00000425280 UBA2Q9UBT2 640 aaPredicted RBP26.84■■□□□ 1.89
LDB1-202ENST00000425280 CCL16O15467 120 aa26.83■■□□□ 1.89
LDB1-202ENST00000425280 TBL1XO60907 577 aa26.83■■□□□ 1.89
LDB1-202ENST00000425280 RNF219Q5W0B1 726 aaPredicted RBP26.83■■□□□ 1.89
LDB1-202ENST00000425280 ALG1LQ6GMV1 187 aa26.83■■□□□ 1.89
LDB1-202ENST00000425280 SPATS2Q86XZ4 545 aaKnown RBP26.83■■□□□ 1.89
LDB1-202ENST00000425280 CORO1BQ9BR76 489 aa26.83■■□□□ 1.89
LDB1-202ENST00000425280 C17orf80Q9BSJ5 609 aa26.83■■□□□ 1.89
LDB1-202ENST00000425280 IQCGQ9H095 443 aaKnown RBP26.83■■□□□ 1.89
LDB1-202ENST00000425280 A0A1W2PRU2 124 aa26.83■■□□□ 1.89
LDB1-202ENST00000425280 LINC01553A4QN01 128 aa26.83■■□□□ 1.89
LDB1-202ENST00000425280 CKMP06732 381 aa26.83■■□□□ 1.89
LDB1-202ENST00000425280 F7P08709 466 aaPredicted RBP26.83■■□□□ 1.89
LDB1-202ENST00000425280 GJA1P17302 382 aa26.83■■□□□ 1.89
LDB1-202ENST00000425280 SERPINH1P50454 418 aaKnown RBP26.83■■□□□ 1.89
LDB1-202ENST00000425280 SLC7A9P82251 487 aa26.83■■□□□ 1.89
LDB1-202ENST00000425280 SF3A3Q12874 501 aaKnown RBP eCLIP26.83■■□□□ 1.89
LDB1-202ENST00000425280 ESRP1Q6NXG1 681 aaKnown RBP26.83■■□□□ 1.89
LDB1-202ENST00000425280 SPRED2Q7Z698 418 aa26.83■■□□□ 1.89
LDB1-202ENST00000425280 VPS11Q9H270 941 aa26.83■■□□□ 1.89
LDB1-202ENST00000425280 SLC2A6Q9UGQ3 507 aa26.83■■□□□ 1.89
LDB1-202ENST00000425280 SEPT3Q9UH03 358 aa26.83■■□□□ 1.89
LDB1-202ENST00000425280 PLLPQ9Y342 182 aa26.83■■□□□ 1.89
LDB1-202ENST00000425280 LOC285095A0A1B0GVY8 99 aa26.82■■□□□ 1.88
LDB1-202ENST00000425280 GOLGA8TH3BQL2 631 aa26.82■■□□□ 1.88
LDB1-202ENST00000425280 TPP1O14773 563 aa26.82■■□□□ 1.88
LDB1-202ENST00000425280 MYL4P12829 197 aa26.82■■□□□ 1.88
LDB1-202ENST00000425280 CDC25CP30307 473 aa26.82■■□□□ 1.88
LDB1-202ENST00000425280 CLCN4P51793 760 aa26.82■■□□□ 1.88
LDB1-202ENST00000425280 MSLNQ13421 630 aaPredicted RBP26.82■■□□□ 1.88
LDB1-202ENST00000425280 SEPT6Q14141 434 aa26.82■■□□□ 1.88
LDB1-202ENST00000425280 STXBP5Q5T5C0 1151 aa26.82■■□□□ 1.88
LDB1-202ENST00000425280 FAM217AQ8IXS0 508 aa26.82■■□□□ 1.88
LDB1-202ENST00000425280 CNPY4Q8N129 248 aa26.82■■□□□ 1.88
LDB1-202ENST00000425280 HJURPQ8NCD3 748 aaPredicted RBP26.82■■□□□ 1.88
LDB1-202ENST00000425280 CCDC197Q8NCU1 140 aa26.82■■□□□ 1.88
LDB1-202ENST00000425280 LRRC8CQ8TDW0 803 aa26.82■■□□□ 1.88
LDB1-202ENST00000425280 ACMSDQ8TDX5 336 aa26.82■■□□□ 1.88
LDB1-202ENST00000425280 ZNF75CPQ92670 426 aaPredicted RBP26.82■■□□□ 1.88
LDB1-202ENST00000425280 MGME1Q9BQP7 344 aa26.82■■□□□ 1.88
LDB1-202ENST00000425280 TLR9Q9NR96 1032 aa26.82■■□□□ 1.88
LDB1-202ENST00000425280 TREX1Q9NSU2 369 aa26.82■■□□□ 1.88
LDB1-202ENST00000425280 WDR91A4D1P6 747 aa26.81■■□□□ 1.88
LDB1-202ENST00000425280 SNX3O60493 162 aa26.81■■□□□ 1.88
LDB1-202ENST00000425280 C1RP00736 705 aa26.81■■□□□ 1.88
LDB1-202ENST00000425280 CRHR1P34998 444 aa26.81■■□□□ 1.88
LDB1-202ENST00000425280 PPM1LQ5SGD2 360 aa26.81■■□□□ 1.88
LDB1-202ENST00000425280 C6orf89Q6UWU4 347 aa26.81■■□□□ 1.88
LDB1-202ENST00000425280 MICALCLQ6ZW33 695 aa26.81■■□□□ 1.88
LDB1-202ENST00000425280 BBS5Q8N3I7 341 aa26.81■■□□□ 1.88
LDB1-202ENST00000425280 TTC16Q8NEE8 873 aa26.81■■□□□ 1.88
LDB1-202ENST00000425280 MUC3BQ9H195 1237 aa26.81■■□□□ 1.88
LDB1-202ENST00000425280 ASAH2Q9NR71 780 aa26.81■■□□□ 1.88
LDB1-202ENST00000425280 MTCL1Q9Y4B5 1905 aaKnown RBP26.81■■□□□ 1.88
LDB1-202ENST00000425280 ATXN1LP0C7T5 689 aaKnown RBP26.81■■□□□ 1.88
LDB1-202ENST00000425280 SPRP35270 261 aaPredicted RBP26.81■■□□□ 1.88
LDB1-202ENST00000425280 ARCN1P48444 511 aaKnown RBP26.81■■□□□ 1.88
LDB1-202ENST00000425280 LIMK2P53671 638 aa26.81■■□□□ 1.88
LDB1-202ENST00000425280 PDE1BQ01064 536 aa26.81■■□□□ 1.88
LDB1-202ENST00000425280 FSCBQ5H9T9 825 aa26.81■■□□□ 1.88
LDB1-202ENST00000425280 SIRPB2Q5JXA9 342 aa26.81■■□□□ 1.88
LDB1-202ENST00000425280 FAM47EQ6ZV65 393 aa26.81■■□□□ 1.88
LDB1-202ENST00000425280 CARNMT1Q8N4J0 409 aa26.81■■□□□ 1.88
LDB1-202ENST00000425280 TMA16Q96EY4 203 aaKnown RBP26.81■■□□□ 1.88
LDB1-202ENST00000425280 GCNAQ96QF7 691 aa26.81■■□□□ 1.88
LDB1-202ENST00000425280 PSKH2Q96QS6 385 aa26.81■■□□□ 1.88
LDB1-202ENST00000425280 MCMBPQ9BTE3 642 aa26.81■■□□□ 1.88
LDB1-202ENST00000425280 CINPQ9BW66 212 aaPredicted RBP26.81■■□□□ 1.88
LDB1-202ENST00000425280 CFAP97Q9P2B7 532 aa26.81■■□□□ 1.88
LDB1-202ENST00000425280 LSM7Q9UK45 103 aaKnown RBP26.81■■□□□ 1.88
LDB1-202ENST00000425280 TRAV19A0A0A6YYK7 116 aa26.8■■□□□ 1.88
LDB1-202ENST00000425280 CBX4O00257 560 aa26.8■■□□□ 1.88
LDB1-202ENST00000425280 ARNTP27540 789 aa26.8■■□□□ 1.88
LDB1-202ENST00000425280 RFTN1Q14699 578 aaPredicted RBP26.8■■□□□ 1.88
LDB1-202ENST00000425280 ARMC3Q5W041 872 aa26.8■■□□□ 1.88
LDB1-202ENST00000425280 CGB2Q6NT52 195 aa26.8■■□□□ 1.88
LDB1-202ENST00000425280 ZNF783Q6ZMS7 281 aa26.8■■□□□ 1.88
LDB1-202ENST00000425280 ATP2A3Q93084 1043 aa26.8■■□□□ 1.88
LDB1-202ENST00000425280 CABS1Q96KC9 395 aa26.8■■□□□ 1.88
LDB1-202ENST00000425280 RANBP9Q96S59 729 aa26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms