RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 NPFFR1Q9GZQ6 430 aa4.23□□□□□ -1.73
LINC00397-201ENST00000422074 CXorf56Q9H5V9 222 aa4.23□□□□□ -1.73
LINC00397-201ENST00000422074 MVB12BQ9H7P6 319 aa4.23□□□□□ -1.73
LINC00397-201ENST00000422074 DDX31Q9H8H2 851 aaKnown RBP4.23□□□□□ -1.73
LINC00397-201ENST00000422074 CHODLQ9H9P2 273 aa4.23□□□□□ -1.73
LINC00397-201ENST00000422074 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.22□□□□□ -1.73
LINC00397-201ENST00000422074 hCG_1642624A0A1W2PR95 340 aa4.22□□□□□ -1.73
LINC00397-201ENST00000422074 SMTNL1A8MU46 457 aa4.22□□□□□ -1.73
LINC00397-201ENST00000422074 SLC16A5O15375 505 aa4.22□□□□□ -1.73
LINC00397-201ENST00000422074 ZBTB11O95625 1053 aaPredicted RBP4.22□□□□□ -1.73
LINC00397-201ENST00000422074 SERPINC1P01008 464 aa4.22□□□□□ -1.73
LINC00397-201ENST00000422074 CHKAP35790 457 aa4.22□□□□□ -1.73
LINC00397-201ENST00000422074 PTPN9P43378 593 aa4.22□□□□□ -1.73
LINC00397-201ENST00000422074 TUBA1BP68363 451 aa4.22□□□□□ -1.73
LINC00397-201ENST00000422074 FAM27E3Q08E93 113 aa4.22□□□□□ -1.73
LINC00397-201ENST00000422074 PRKG1Q13976 671 aa4.22□□□□□ -1.73
LINC00397-201ENST00000422074 MYBPC2Q14324 1141 aa4.22□□□□□ -1.73
LINC00397-201ENST00000422074 C9orf50Q5SZB4 431 aa4.22□□□□□ -1.73
LINC00397-201ENST00000422074 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.22□□□□□ -1.73
LINC00397-201ENST00000422074 CREB3L2Q70SY1 520 aa4.22□□□□□ -1.73
LINC00397-201ENST00000422074 CUZD1Q86UP6 607 aa4.22□□□□□ -1.73
LINC00397-201ENST00000422074 HERC6Q8IVU3 1022 aa4.22□□□□□ -1.73
LINC00397-201ENST00000422074 TMEM170AQ8WVE7 144 aa4.22□□□□□ -1.73
LINC00397-201ENST00000422074 RUBCNQ92622 972 aa4.22□□□□□ -1.73
LINC00397-201ENST00000422074 SH3KBP1Q96B97 665 aa4.22□□□□□ -1.73
LINC00397-201ENST00000422074 RTP4Q96DX8 246 aa4.22□□□□□ -1.73
LINC00397-201ENST00000422074 RNFT2Q96EX2 444 aa4.22□□□□□ -1.73
LINC00397-201ENST00000422074 PAGR1Q9BTK6 254 aa4.22□□□□□ -1.73
LINC00397-201ENST00000422074 CTDSP1Q9GZU7 261 aa4.22□□□□□ -1.73
LINC00397-201ENST00000422074 CLK4Q9HAZ1 481 aaKnown RBP4.22□□□□□ -1.73
LINC00397-201ENST00000422074 WDR6Q9NNW5 1121 aaKnown RBP4.22□□□□□ -1.73
LINC00397-201ENST00000422074 RIPOR2Q9Y4F9 1068 aa4.22□□□□□ -1.73
LINC00397-201ENST00000422074 PCDHGB1Q9Y5G3 927 aa4.22□□□□□ -1.73
LINC00397-201ENST00000422074 A0A0U1RQJ8 604 aa4.21□□□□□ -1.74
LINC00397-201ENST00000422074 IFITM10A6NMD0 228 aa4.21□□□□□ -1.74
LINC00397-201ENST00000422074 B9A039 149 aa4.21□□□□□ -1.74
LINC00397-201ENST00000422074 CHL1O00533 1208 aa4.21□□□□□ -1.74
LINC00397-201ENST00000422074 ITM2AO43736 263 aa4.21□□□□□ -1.74
LINC00397-201ENST00000422074 HBP1O60381 514 aa4.21□□□□□ -1.74
LINC00397-201ENST00000422074 CTPS1P17812 591 aa4.21□□□□□ -1.74
LINC00397-201ENST00000422074 ITGB8P26012 769 aa4.21□□□□□ -1.74
LINC00397-201ENST00000422074 TTKP33981 857 aa4.21□□□□□ -1.74
LINC00397-201ENST00000422074 GRK6P43250 576 aa4.21□□□□□ -1.74
LINC00397-201ENST00000422074 MXI1P50539 228 aa4.21□□□□□ -1.74
LINC00397-201ENST00000422074 RHBDL3P58872 404 aa4.21□□□□□ -1.74
LINC00397-201ENST00000422074 KRTAP10-7P60409 375 aaPredicted RBP4.21□□□□□ -1.74
LINC00397-201ENST00000422074 HYAL1Q12794 435 aa4.21□□□□□ -1.74
LINC00397-201ENST00000422074 CTTNQ14247 550 aaKnown RBP4.21□□□□□ -1.74
LINC00397-201ENST00000422074 LPIN1Q14693 890 aa4.21□□□□□ -1.74
LINC00397-201ENST00000422074 HLFQ16534 295 aa4.21□□□□□ -1.74
LINC00397-201ENST00000422074 ME3Q16798 604 aa4.21□□□□□ -1.74
LINC00397-201ENST00000422074 KIF19Q2TAC6 998 aa4.21□□□□□ -1.74
LINC00397-201ENST00000422074 PLEKHO1Q53GL0 409 aaPredicted RBP4.21□□□□□ -1.74
LINC00397-201ENST00000422074 DCAF6Q58WW2 860 aa4.21□□□□□ -1.74
LINC00397-201ENST00000422074 NAPEPLDQ6IQ20 393 aa4.21□□□□□ -1.74
LINC00397-201ENST00000422074 SPSB3Q6PJ21 355 aa4.21□□□□□ -1.74
LINC00397-201ENST00000422074 TMEM57Q8N5G2 664 aa4.21□□□□□ -1.74
LINC00397-201ENST00000422074 MYCT1Q8N699 235 aa4.21□□□□□ -1.74
LINC00397-201ENST00000422074 MIGA1Q8NAN2 632 aa4.21□□□□□ -1.74
LINC00397-201ENST00000422074 DUX5Q96PT3 197 aa4.21□□□□□ -1.74
LINC00397-201ENST00000422074 FIZ1Q96SL8 496 aa4.21□□□□□ -1.74
LINC00397-201ENST00000422074 LHPPQ9H008 270 aa4.21□□□□□ -1.74
LINC00397-201ENST00000422074 KCNG2Q9UJ96 466 aa4.21□□□□□ -1.74
LINC00397-201ENST00000422074 DNAJC16Q9Y2G8 782 aa4.21□□□□□ -1.74
LINC00397-201ENST00000422074 A0A1B0GVM2 712 aa4.2□□□□□ -1.74
LINC00397-201ENST00000422074 DENND3A2RUS2 1198 aa4.2□□□□□ -1.74
LINC00397-201ENST00000422074 STX16-NPEPL1H3BU86 382 aa4.2□□□□□ -1.74
LINC00397-201ENST00000422074 STX16O14662 325 aa4.2□□□□□ -1.74
LINC00397-201ENST00000422074 CBX6O95503 412 aa4.2□□□□□ -1.74
LINC00397-201ENST00000422074 ADAP00813 363 aa4.2□□□□□ -1.74
LINC00397-201ENST00000422074 IL1AP01583 271 aa4.2□□□□□ -1.74
LINC00397-201ENST00000422074 CNPP09543 421 aaKnown RBP4.2□□□□□ -1.74
LINC00397-201ENST00000422074 CKMT1AP12532 417 aa4.2□□□□□ -1.74
LINC00397-201ENST00000422074 MYF6P23409 242 aa4.2□□□□□ -1.74
LINC00397-201ENST00000422074 ERVFC1-1P60608 527 aa4.2□□□□□ -1.74
LINC00397-201ENST00000422074 POU5F1BQ06416 359 aa4.2□□□□□ -1.74
LINC00397-201ENST00000422074 ILF3Q12906 894 aaKnown RBP eCLIP4.2□□□□□ -1.74
LINC00397-201ENST00000422074 COASYQ13057 564 aa4.2□□□□□ -1.74
LINC00397-201ENST00000422074 IZUMO4Q1ZYL8 232 aa4.2□□□□□ -1.74
LINC00397-201ENST00000422074 H1FNTQ75WM6 255 aaPredicted RBP4.2□□□□□ -1.74
LINC00397-201ENST00000422074 FJX1Q86VR8 437 aa4.2□□□□□ -1.74
LINC00397-201ENST00000422074 USP38Q8NB14 1042 aa4.2□□□□□ -1.74
LINC00397-201ENST00000422074 GPT2Q8TD30 523 aa4.2□□□□□ -1.74
LINC00397-201ENST00000422074 TBC1D22AQ8WUA7 517 aa4.2□□□□□ -1.74
LINC00397-201ENST00000422074 ATOH1Q92858 354 aaPredicted RBP4.2□□□□□ -1.74
LINC00397-201ENST00000422074 RBM17Q96I25 401 aaKnown RBP4.2□□□□□ -1.74
LINC00397-201ENST00000422074 LMLNQ96KR4 655 aa4.2□□□□□ -1.74
LINC00397-201ENST00000422074 C1QTNF4Q9BXJ3 329 aa4.2□□□□□ -1.74
LINC00397-201ENST00000422074 GAREM1Q9H706 876 aa4.2□□□□□ -1.74
LINC00397-201ENST00000422074 TTC12Q9H892 705 aaPredicted RBP4.2□□□□□ -1.74
LINC00397-201ENST00000422074 FEM1BQ9UK73 627 aa4.2□□□□□ -1.74
LINC00397-201ENST00000422074 TAF1P21675 1872 aa4.2□□□□□ -1.74
LINC00397-201ENST00000422074 EBAG9O00559 213 aa4.19□□□□□ -1.74
LINC00397-201ENST00000422074 SERPINI2O75830 405 aa4.19□□□□□ -1.74
LINC00397-201ENST00000422074 DAOP14920 347 aa4.19□□□□□ -1.74
LINC00397-201ENST00000422074 COMPP49747 757 aaPredicted RBP4.19□□□□□ -1.74
LINC00397-201ENST00000422074 ARSFP54793 590 aa4.19□□□□□ -1.74
LINC00397-201ENST00000422074 ARL4CP56559 192 aa4.19□□□□□ -1.74
LINC00397-201ENST00000422074 GOLGA8FQ08AF8 430 aa4.19□□□□□ -1.74
LINC00397-201ENST00000422074 GRSF1Q12849 480 aaKnown RBP eCLIP4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms