RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 STIP1P31948 543 aaKnown RBP17.79■□□□□ 0.44
LINC00271-201ENST00000421378 CXCL12P48061 93 aa17.79■□□□□ 0.44
LINC00271-201ENST00000421378 SCNN1BP51168 640 aa17.79■□□□□ 0.44
LINC00271-201ENST00000421378 SATB1Q01826 763 aa17.79■□□□□ 0.44
LINC00271-201ENST00000421378 ITKQ08881 620 aa17.79■□□□□ 0.44
LINC00271-201ENST00000421378 DSG4Q86SJ6 1040 aa17.79■□□□□ 0.44
LINC00271-201ENST00000421378 ZNF567Q8N184 647 aa17.79■□□□□ 0.44
LINC00271-201ENST00000421378 TSTD1Q8NFU3 115 aa17.79■□□□□ 0.44
LINC00271-201ENST00000421378 GRIN3AQ8TCU5 1115 aa17.79■□□□□ 0.44
LINC00271-201ENST00000421378 TEKT5Q96M29 485 aa17.79■□□□□ 0.44
LINC00271-201ENST00000421378 MKRN2Q9H000 416 aaKnown RBP17.79■□□□□ 0.44
LINC00271-201ENST00000421378 ZBTB24O43167 697 aaPredicted RBP17.78■□□□□ 0.44
LINC00271-201ENST00000421378 GPR37L1O60883 481 aa17.78■□□□□ 0.44
LINC00271-201ENST00000421378 RNASEH1O60930 286 aaKnown RBP17.78■□□□□ 0.44
LINC00271-201ENST00000421378 CR2P20023 1033 aa17.78■□□□□ 0.44
LINC00271-201ENST00000421378 MAPK8P45983 427 aa17.78■□□□□ 0.44
LINC00271-201ENST00000421378 CSNK1DP48730 415 aa17.78■□□□□ 0.44
LINC00271-201ENST00000421378 COPAP53621 1224 aa17.78■□□□□ 0.44
LINC00271-201ENST00000421378 NRLP54845 237 aa17.78■□□□□ 0.44
LINC00271-201ENST00000421378 GDF10P55107 478 aa17.78■□□□□ 0.44
LINC00271-201ENST00000421378 RAD51Q06609 339 aa17.78■□□□□ 0.44
LINC00271-201ENST00000421378 FAM182AQ5T1J6 154 aa17.78■□□□□ 0.44
LINC00271-201ENST00000421378 ALG1LQ6GMV1 187 aa17.78■□□□□ 0.44
LINC00271-201ENST00000421378 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.78■□□□□ 0.44
LINC00271-201ENST00000421378 CHST14Q8NCH0 376 aa17.78■□□□□ 0.44
LINC00271-201ENST00000421378 HHIPQ96QV1 700 aa17.78■□□□□ 0.44
LINC00271-201ENST00000421378 NUDCD1Q96RS6 583 aa17.78■□□□□ 0.44
LINC00271-201ENST00000421378 HEPHQ9BQS7 1158 aa17.78■□□□□ 0.44
LINC00271-201ENST00000421378 C1QTNF1Q9BXJ1 281 aa17.78■□□□□ 0.44
LINC00271-201ENST00000421378 RSPH9Q9H1X1 276 aaPredicted RBP17.78■□□□□ 0.44
LINC00271-201ENST00000421378 ZDHHC6Q9H6R6 413 aa17.78■□□□□ 0.44
LINC00271-201ENST00000421378 IL36AQ9UHA7 158 aa17.78■□□□□ 0.44
LINC00271-201ENST00000421378 EVLQ9UI08 416 aaPredicted RBP17.78■□□□□ 0.44
LINC00271-201ENST00000421378 TRHDEQ9UKU6 1024 aa17.78■□□□□ 0.44
LINC00271-201ENST00000421378 DRG1Q9Y295 367 aaKnown RBP17.78■□□□□ 0.44
LINC00271-201ENST00000421378 ATP8A1Q9Y2Q0 1164 aa17.78■□□□□ 0.44
LINC00271-201ENST00000421378 GJB3O75712 270 aa17.77■□□□□ 0.44
LINC00271-201ENST00000421378 ALDH1A2O94788 518 aa17.77■□□□□ 0.44
LINC00271-201ENST00000421378 POP4O95707 220 aaKnown RBP17.77■□□□□ 0.44
LINC00271-201ENST00000421378 IFNB1P01574 187 aa17.77■□□□□ 0.44
LINC00271-201ENST00000421378 PRNPP04156 253 aa17.77■□□□□ 0.44
LINC00271-201ENST00000421378 AVPR2P30518 371 aa17.77■□□□□ 0.44
LINC00271-201ENST00000421378 CHRNA3P32297 505 aa17.77■□□□□ 0.44
LINC00271-201ENST00000421378 KCNJ1P48048 391 aa17.77■□□□□ 0.44
LINC00271-201ENST00000421378 FNTAP49354 379 aa17.77■□□□□ 0.44
LINC00271-201ENST00000421378 AP1S1P61966 158 aa17.77■□□□□ 0.44
LINC00271-201ENST00000421378 TUBB2AQ13885 445 aa17.77■□□□□ 0.44
LINC00271-201ENST00000421378 MYLK3Q32MK0 819 aa17.77■□□□□ 0.44
LINC00271-201ENST00000421378 RALGPS1Q5JS13 557 aa17.77■□□□□ 0.44
LINC00271-201ENST00000421378 ANO7Q6IWH7 933 aa17.77■□□□□ 0.44
LINC00271-201ENST00000421378 CCDC137Q6PK04 289 aaKnown RBP17.77■□□□□ 0.44
LINC00271-201ENST00000421378 GSTA5Q7RTV2 222 aa17.77■□□□□ 0.44
LINC00271-201ENST00000421378 PID1Q7Z2X4 250 aa17.77■□□□□ 0.44
LINC00271-201ENST00000421378 CACUL1Q86Y37 369 aa17.77■□□□□ 0.44
LINC00271-201ENST00000421378 TMPRSS6Q8IU80 811 aa17.77■□□□□ 0.44
LINC00271-201ENST00000421378 MMAAQ8IVH4 418 aaKnown RBP17.77■□□□□ 0.44
LINC00271-201ENST00000421378 CCDC89Q8N998 374 aa17.77■□□□□ 0.44
LINC00271-201ENST00000421378 HMGB4Q8WW32 186 aa17.77■□□□□ 0.44
LINC00271-201ENST00000421378 RTP4Q96DX8 246 aa17.77■□□□□ 0.44
LINC00271-201ENST00000421378 SPATA13Q96N96 652 aa17.77■□□□□ 0.44
LINC00271-201ENST00000421378 FAM129BQ96TA1 746 aa17.77■□□□□ 0.44
LINC00271-201ENST00000421378 SEMA3CQ99985 751 aa17.77■□□□□ 0.44
LINC00271-201ENST00000421378 TUBB2BQ9BVA1 445 aa17.77■□□□□ 0.44
LINC00271-201ENST00000421378 SCUBE2Q9NQ36 999 aa17.77■□□□□ 0.44
LINC00271-201ENST00000421378 MRFAP1Q9Y605 127 aa17.77■□□□□ 0.44
LINC00271-201ENST00000421378 C5orf60A6NFR6 353 aa17.76■□□□□ 0.43
LINC00271-201ENST00000421378 CCDC188H7C350 402 aa17.76■□□□□ 0.43
LINC00271-201ENST00000421378 INSIG1O15503 277 aa17.76■□□□□ 0.43
LINC00271-201ENST00000421378 OPHN1O60890 802 aa17.76■□□□□ 0.43
LINC00271-201ENST00000421378 LEFTY1O75610 366 aa17.76■□□□□ 0.43
LINC00271-201ENST00000421378 PAPSS2O95340 614 aaPredicted RBP17.76■□□□□ 0.43
LINC00271-201ENST00000421378 IL1BP01584 269 aa17.76■□□□□ 0.43
LINC00271-201ENST00000421378 CTSLP07711 333 aa17.76■□□□□ 0.43
LINC00271-201ENST00000421378 NDUFV2P19404 249 aa17.76■□□□□ 0.43
LINC00271-201ENST00000421378 CES1P23141 567 aa17.76■□□□□ 0.43
LINC00271-201ENST00000421378 GKP32189 559 aa17.76■□□□□ 0.43
LINC00271-201ENST00000421378 COILP38432 576 aaPredicted RBP17.76■□□□□ 0.43
LINC00271-201ENST00000421378 DSC2Q02487 901 aa17.76■□□□□ 0.43
LINC00271-201ENST00000421378 LMNB2Q03252 620 aa17.76■□□□□ 0.43
LINC00271-201ENST00000421378 CKAP4Q07065 602 aaKnown RBP17.76■□□□□ 0.43
LINC00271-201ENST00000421378 GRM3Q14832 879 aa17.76■□□□□ 0.43
LINC00271-201ENST00000421378 WHAMMP3Q1A5X7 153 aa17.76■□□□□ 0.43
LINC00271-201ENST00000421378 P3H1Q32P28 736 aa17.76■□□□□ 0.43
LINC00271-201ENST00000421378 TMEM31Q5JXX7 168 aa17.76■□□□□ 0.43
LINC00271-201ENST00000421378 DNTTIP2Q5QJE6 756 aaKnown RBP17.76■□□□□ 0.43
LINC00271-201ENST00000421378 ANKRD20A2Q5SQ80 823 aa17.76■□□□□ 0.43
LINC00271-201ENST00000421378 ANKRD20A1Q5TYW2 823 aa17.76■□□□□ 0.43
LINC00271-201ENST00000421378 ANKRD20A3Q5VUR7 823 aa17.76■□□□□ 0.43
LINC00271-201ENST00000421378 ZNF776Q68DI1 518 aaPredicted RBP17.76■□□□□ 0.43
LINC00271-201ENST00000421378 ITPRIPL1Q6GPH6 555 aa17.76■□□□□ 0.43
LINC00271-201ENST00000421378 TTC27Q6P3X3 843 aa17.76■□□□□ 0.43
LINC00271-201ENST00000421378 SRLQ86TD4 932 aa17.76■□□□□ 0.43
LINC00271-201ENST00000421378 C1orf210Q8IVY1 113 aa17.76■□□□□ 0.43
LINC00271-201ENST00000421378 CAMKK1Q8N5S9 505 aa17.76■□□□□ 0.43
LINC00271-201ENST00000421378 DTWD2Q8NBA8 298 aa17.76■□□□□ 0.43
LINC00271-201ENST00000421378 CCDC110Q8TBZ0 833 aa17.76■□□□□ 0.43
LINC00271-201ENST00000421378 LRIG1Q96JA1 1093 aa17.76■□□□□ 0.43
LINC00271-201ENST00000421378 MRGPRX1Q96LB2 322 aa17.76■□□□□ 0.43
LINC00271-201ENST00000421378 DDX47Q9H0S4 455 aaKnown RBP17.76■□□□□ 0.43
LINC00271-201ENST00000421378 NOD2Q9HC29 1040 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms