RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 ZNF805Q5CZA5 627 aa14.86□□□□□ -0.03
LIMS1-206ENST00000414829 MARC1Q5VT66 337 aa14.86□□□□□ -0.03
LIMS1-206ENST00000414829 NEK5Q6P3R8 708 aa14.86□□□□□ -0.03
LIMS1-206ENST00000414829 SPOCD1Q6ZMY3 1216 aa14.86□□□□□ -0.03
LIMS1-206ENST00000414829 ASCL5Q7RTU5 278 aa14.86□□□□□ -0.03
LIMS1-206ENST00000414829 FAM124AQ86V42 546 aa14.86□□□□□ -0.03
LIMS1-206ENST00000414829 SYT12Q8IV01 421 aa14.86□□□□□ -0.03
LIMS1-206ENST00000414829 CEP76Q8TAP6 659 aa14.86□□□□□ -0.03
LIMS1-206ENST00000414829 FAM131CQ96AQ9 280 aa14.86□□□□□ -0.03
LIMS1-206ENST00000414829 RNF25Q96BH1 459 aaPredicted RBP14.86□□□□□ -0.03
LIMS1-206ENST00000414829 ZNF419Q96HQ0 510 aaPredicted RBP14.86□□□□□ -0.03
LIMS1-206ENST00000414829 HSPA12BQ96MM6 686 aa14.86□□□□□ -0.03
LIMS1-206ENST00000414829 ZNF641Q96N77 438 aaPredicted RBP14.86□□□□□ -0.03
LIMS1-206ENST00000414829 TSGA13Q96PP4 275 aa14.86□□□□□ -0.03
LIMS1-206ENST00000414829 FERMT1Q9BQL6 677 aa14.86□□□□□ -0.03
LIMS1-206ENST00000414829 GPR174Q9BXC1 333 aa14.86□□□□□ -0.03
LIMS1-206ENST00000414829 CPEB1Q9BZB8 566 aaKnown RBP14.86□□□□□ -0.03
LIMS1-206ENST00000414829 GOLPH3Q9H4A6 298 aa14.86□□□□□ -0.03
LIMS1-206ENST00000414829 ATP13A3Q9H7F0 1226 aa14.86□□□□□ -0.03
LIMS1-206ENST00000414829 PREBQ9HCU5 417 aa14.86□□□□□ -0.03
LIMS1-206ENST00000414829 VPS45Q9NRW7 570 aa14.86□□□□□ -0.03
LIMS1-206ENST00000414829 MYO18AQ92614 2054 aaKnown RBP14.85□□□□□ -0.03
LIMS1-206ENST00000414829 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.85□□□□□ -0.03
LIMS1-206ENST00000414829 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.85□□□□□ -0.03
LIMS1-206ENST00000414829 BCLAF3A2AJT9 711 aaKnown RBP14.85□□□□□ -0.03
LIMS1-206ENST00000414829 PRR5-ARHGAP8B1AHC4 643 aa14.85□□□□□ -0.03
LIMS1-206ENST00000414829 MTSS1O43312 755 aa14.85□□□□□ -0.03
LIMS1-206ENST00000414829 CES1P23141 567 aa14.85□□□□□ -0.03
LIMS1-206ENST00000414829 SERPINA4P29622 427 aa14.85□□□□□ -0.03
LIMS1-206ENST00000414829 PTPN7P35236 360 aa14.85□□□□□ -0.03
LIMS1-206ENST00000414829 ADPRHP54922 357 aa14.85□□□□□ -0.03
LIMS1-206ENST00000414829 CREB5Q02930 508 aa14.85□□□□□ -0.03
LIMS1-206ENST00000414829 ARSIQ5FYB1 569 aa14.85□□□□□ -0.03
LIMS1-206ENST00000414829 CCDC181Q5TID7 509 aa14.85□□□□□ -0.03
LIMS1-206ENST00000414829 FBXL19Q6PCT2 694 aa14.85□□□□□ -0.03
LIMS1-206ENST00000414829 BRAT1Q6PJG6 821 aa14.85□□□□□ -0.03
LIMS1-206ENST00000414829 LEKR1Q6ZMV7 388 aa14.85□□□□□ -0.03
LIMS1-206ENST00000414829 ERN2Q76MJ5 926 aaKnown RBP14.85□□□□□ -0.03
LIMS1-206ENST00000414829 NT5DC3Q86UY8 548 aa14.85□□□□□ -0.03
LIMS1-206ENST00000414829 TMEFF1Q8IYR6 380 aa14.85□□□□□ -0.03
LIMS1-206ENST00000414829 AADATQ8N5Z0 425 aa14.85□□□□□ -0.03
LIMS1-206ENST00000414829 PQLC3Q8N755 202 aa14.85□□□□□ -0.03
LIMS1-206ENST00000414829 CHST14Q8NCH0 376 aa14.85□□□□□ -0.03
LIMS1-206ENST00000414829 TRIM58Q8NG06 486 aa14.85□□□□□ -0.03
LIMS1-206ENST00000414829 OR14C36Q8NHC7 312 aa14.85□□□□□ -0.03
LIMS1-206ENST00000414829 HCAR2Q8TDS4 363 aa14.85□□□□□ -0.03
LIMS1-206ENST00000414829 P3H4Q92791 437 aa14.85□□□□□ -0.03
LIMS1-206ENST00000414829 PDLIM2Q96JY6 352 aa14.85□□□□□ -0.03
LIMS1-206ENST00000414829 PHOX2BQ99453 314 aa14.85□□□□□ -0.03
LIMS1-206ENST00000414829 NEUROG2Q9H2A3 272 aa14.85□□□□□ -0.03
LIMS1-206ENST00000414829 DTLQ9NZJ0 730 aa14.85□□□□□ -0.03
LIMS1-206ENST00000414829 DKK3Q9UBP4 350 aa14.85□□□□□ -0.03
LIMS1-206ENST00000414829 LHX3Q9UBR4 397 aa14.85□□□□□ -0.03
LIMS1-206ENST00000414829 GUCA1BQ9UMX6 200 aa14.85□□□□□ -0.03
LIMS1-206ENST00000414829 WASF2Q9Y6W5 498 aa14.85□□□□□ -0.03
LIMS1-206ENST00000414829 FANCMQ8IYD8 2048 aa14.84□□□□□ -0.03
LIMS1-206ENST00000414829 METTL12A8MUP2 240 aa14.84□□□□□ -0.03
LIMS1-206ENST00000414829 MATN3O15232 486 aa14.84□□□□□ -0.03
LIMS1-206ENST00000414829 ZSCAN12O43309 604 aa14.84□□□□□ -0.03
LIMS1-206ENST00000414829 PLRG1O43660 514 aaKnown RBP14.84□□□□□ -0.03
LIMS1-206ENST00000414829 CTSLP07711 333 aa14.84□□□□□ -0.03
LIMS1-206ENST00000414829 CA4P22748 312 aa14.84□□□□□ -0.03
LIMS1-206ENST00000414829 MSNP26038 577 aaKnown RBP14.84□□□□□ -0.03
LIMS1-206ENST00000414829 DRD3P35462 400 aa14.84□□□□□ -0.03
LIMS1-206ENST00000414829 MMP13P45452 471 aa14.84□□□□□ -0.03
LIMS1-206ENST00000414829 CCR5P51681 352 aa14.84□□□□□ -0.03
LIMS1-206ENST00000414829 GBE1Q04446 702 aa14.84□□□□□ -0.03
LIMS1-206ENST00000414829 CYTH1Q15438 398 aa14.84□□□□□ -0.03
LIMS1-206ENST00000414829 AGBL4Q5VU57 503 aa14.84□□□□□ -0.03
LIMS1-206ENST00000414829 PEAR1Q5VY43 1037 aaPredicted RBP14.84□□□□□ -0.03
LIMS1-206ENST00000414829 KIAA0895LQ68EN5 471 aa14.84□□□□□ -0.03
LIMS1-206ENST00000414829 MFSD7Q6UXD7 560 aa14.84□□□□□ -0.03
LIMS1-206ENST00000414829 GDPD4Q6W3E5 623 aa14.84□□□□□ -0.03
LIMS1-206ENST00000414829 PAF1Q8N7H5 531 aa14.84□□□□□ -0.03
LIMS1-206ENST00000414829 PLD5Q8N7P1 536 aa14.84□□□□□ -0.03
LIMS1-206ENST00000414829 C12orf50Q8NA57 414 aaPredicted RBP14.84□□□□□ -0.03
LIMS1-206ENST00000414829 CCNYQ8ND76 341 aa14.84□□□□□ -0.03
LIMS1-206ENST00000414829 MGME1Q9BQP7 344 aa14.84□□□□□ -0.03
LIMS1-206ENST00000414829 POLR1EQ9GZS1 481 aaKnown RBP14.84□□□□□ -0.03
LIMS1-206ENST00000414829 TRIM10Q9UDY6 481 aa14.84□□□□□ -0.03
LIMS1-206ENST00000414829 SARDHQ9UL12 918 aa14.84□□□□□ -0.03
LIMS1-206ENST00000414829 HEY1Q9Y5J3 304 aa14.84□□□□□ -0.03
LIMS1-206ENST00000414829 ATG2BQ96BY7 2078 aa14.84□□□□□ -0.03
LIMS1-206ENST00000414829 hCG_1818297A0A087WSY0 165 aa14.83□□□□□ -0.04
LIMS1-206ENST00000414829 GOLGA6L9A6NEM1 432 aa14.83□□□□□ -0.04
LIMS1-206ENST00000414829 AP1G1O43747 822 aa14.83□□□□□ -0.04
LIMS1-206ENST00000414829 CST8O60676 142 aa14.83□□□□□ -0.04
LIMS1-206ENST00000414829 SOCS5O75159 536 aa14.83□□□□□ -0.04
LIMS1-206ENST00000414829 TJP3O95049 919 aa14.83□□□□□ -0.04
LIMS1-206ENST00000414829 UGT2B4P06133 528 aa14.83□□□□□ -0.04
LIMS1-206ENST00000414829 ADRB3P13945 408 aa14.83□□□□□ -0.04
LIMS1-206ENST00000414829 XPAP23025 273 aaPredicted RBP14.83□□□□□ -0.04
LIMS1-206ENST00000414829 ACSL1P33121 698 aa14.83□□□□□ -0.04
LIMS1-206ENST00000414829 PTGER3P43115 390 aa14.83□□□□□ -0.04
LIMS1-206ENST00000414829 LMNB2Q03252 620 aa14.83□□□□□ -0.04
LIMS1-206ENST00000414829 BCL2L1Q07817 233 aa14.83□□□□□ -0.04
LIMS1-206ENST00000414829 PPIDQ08752 370 aaKnown RBP14.83□□□□□ -0.04
LIMS1-206ENST00000414829 CNTN1Q12860 1018 aa14.83□□□□□ -0.04
LIMS1-206ENST00000414829 CSRP2Q16527 193 aa14.83□□□□□ -0.04
LIMS1-206ENST00000414829 ATXN7L2Q5T6C5 722 aaPredicted RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms