RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 TREX1Q9NSU2 369 aa16.09■□□□□ 0.17
HOXD3-202ENST00000410016 XPR1Q9UBH6 696 aa16.09■□□□□ 0.17
HOXD3-202ENST00000410016 AIM2O14862 343 aa16.08■□□□□ 0.17
HOXD3-202ENST00000410016 RNASEH1O60930 286 aaKnown RBP16.08■□□□□ 0.17
HOXD3-202ENST00000410016 CTSHP09668 335 aa16.08■□□□□ 0.17
HOXD3-202ENST00000410016 CNGA3Q16281 694 aa16.08■□□□□ 0.17
HOXD3-202ENST00000410016 RANBP10Q6VN20 620 aa16.08■□□□□ 0.17
HOXD3-202ENST00000410016 SNX32Q86XE0 403 aa16.08■□□□□ 0.17
HOXD3-202ENST00000410016 SPATA6LQ8N4H0 392 aa16.08■□□□□ 0.17
HOXD3-202ENST00000410016 RP9Q8TA86 221 aaKnown RBP16.08■□□□□ 0.17
HOXD3-202ENST00000410016 SCYL1Q96KG9 808 aa16.08■□□□□ 0.17
HOXD3-202ENST00000410016 TUBGCP5Q96RT8 1024 aa16.08■□□□□ 0.17
HOXD3-202ENST00000410016 FICDQ9BVA6 458 aa16.08■□□□□ 0.17
HOXD3-202ENST00000410016 STK39Q9UEW8 545 aa16.08■□□□□ 0.17
HOXD3-202ENST00000410016 TCAF1Q9Y4C2 921 aa16.08■□□□□ 0.17
HOXD3-202ENST00000410016 FAM95CA0A1B0GW59 222 aa16.08■□□□□ 0.16
HOXD3-202ENST00000410016 CASQ2O14958 399 aaPredicted RBP16.08■□□□□ 0.16
HOXD3-202ENST00000410016 SLC22A2O15244 555 aa16.08■□□□□ 0.16
HOXD3-202ENST00000410016 RAG1P15918 1043 aa16.08■□□□□ 0.16
HOXD3-202ENST00000410016 PEX2P28328 305 aa16.08■□□□□ 0.16
HOXD3-202ENST00000410016 BRMS1LQ5PSV4 323 aa16.08■□□□□ 0.16
HOXD3-202ENST00000410016 TMEM198Q66K66 360 aa16.08■□□□□ 0.16
HOXD3-202ENST00000410016 GDF6Q6KF10 455 aaPredicted RBP16.08■□□□□ 0.16
HOXD3-202ENST00000410016 DSELQ8IZU8 1212 aa16.08■□□□□ 0.16
HOXD3-202ENST00000410016 LZTR1Q8N653 840 aa16.08■□□□□ 0.16
HOXD3-202ENST00000410016 KDM1BQ8NB78 822 aa16.08■□□□□ 0.16
HOXD3-202ENST00000410016 PTCD2Q8WV60 388 aaKnown RBP16.08■□□□□ 0.16
HOXD3-202ENST00000410016 FCRL2Q96LA5 508 aaPredicted RBP16.08■□□□□ 0.16
HOXD3-202ENST00000410016 TSNARE1Q96NA8 513 aa16.08■□□□□ 0.16
HOXD3-202ENST00000410016 VTI1BQ9UEU0 232 aa16.08■□□□□ 0.16
HOXD3-202ENST00000410016 SLCO1B7G3V0H7 640 aa16.07■□□□□ 0.16
HOXD3-202ENST00000410016 HLA-DQB2P05538 268 aa16.07■□□□□ 0.16
HOXD3-202ENST00000410016 ZCCHC18P0CG32 403 aa16.07■□□□□ 0.16
HOXD3-202ENST00000410016 STMN1P16949 149 aa16.07■□□□□ 0.16
HOXD3-202ENST00000410016 ADSLP30566 484 aaPredicted RBP16.07■□□□□ 0.16
HOXD3-202ENST00000410016 SLC1A2P43004 574 aa16.07■□□□□ 0.16
HOXD3-202ENST00000410016 NUDT2P50583 147 aa16.07■□□□□ 0.16
HOXD3-202ENST00000410016 TAS2R39P59534 338 aa16.07■□□□□ 0.16
HOXD3-202ENST00000410016 AFMIDQ63HM1 303 aa16.07■□□□□ 0.16
HOXD3-202ENST00000410016 KYQ8NBH2 561 aa16.07■□□□□ 0.16
HOXD3-202ENST00000410016 C2CD4AQ8NCU7 369 aaPredicted RBP16.07■□□□□ 0.16
HOXD3-202ENST00000410016 GDPD5Q8WTR4 605 aa16.07■□□□□ 0.16
HOXD3-202ENST00000410016 MRGPRX2Q96LB1 330 aa16.07■□□□□ 0.16
HOXD3-202ENST00000410016 OMDQ99983 421 aa16.07■□□□□ 0.16
HOXD3-202ENST00000410016 KLHL4Q9C0H6 718 aa16.07■□□□□ 0.16
HOXD3-202ENST00000410016 PIDD1Q9HB75 910 aa16.07■□□□□ 0.16
HOXD3-202ENST00000410016 MRM3Q9HC36 420 aaKnown RBP16.07■□□□□ 0.16
HOXD3-202ENST00000410016 ENTPD7Q9NQZ7 604 aa16.07■□□□□ 0.16
HOXD3-202ENST00000410016 PDP2Q9P2J9 529 aa16.07■□□□□ 0.16
HOXD3-202ENST00000410016 SFMBT1Q9UHJ3 866 aa16.07■□□□□ 0.16
HOXD3-202ENST00000410016 PACSIN3Q9UKS6 424 aa16.07■□□□□ 0.16
HOXD3-202ENST00000410016 PRPF19Q9UMS4 504 aaKnown RBP16.07■□□□□ 0.16
HOXD3-202ENST00000410016 FNDC1Q4ZHG4 1894 aaPredicted RBP16.07■□□□□ 0.16
HOXD3-202ENST00000410016 ENO4A6NNW6 628 aa16.07■□□□□ 0.16
HOXD3-202ENST00000410016 M0QZQ0 153 aa16.07■□□□□ 0.16
HOXD3-202ENST00000410016 KIF3CO14782 793 aa16.07■□□□□ 0.16
HOXD3-202ENST00000410016 FGF10O15520 208 aaPredicted RBP16.07■□□□□ 0.16
HOXD3-202ENST00000410016 MSI1O43347 362 aaKnown RBP16.07■□□□□ 0.16
HOXD3-202ENST00000410016 ZNF623O75123 536 aa16.07■□□□□ 0.16
HOXD3-202ENST00000410016 POMCP01189 267 aa16.07■□□□□ 0.16
HOXD3-202ENST00000410016 FESP07332 822 aa16.07■□□□□ 0.16
HOXD3-202ENST00000410016 PPARGP37231 505 aaPredicted RBP16.07■□□□□ 0.16
HOXD3-202ENST00000410016 XIAPP98170 497 aa16.07■□□□□ 0.16
HOXD3-202ENST00000410016 PPHLN1Q8NEY8 458 aaKnown RBP16.07■□□□□ 0.16
HOXD3-202ENST00000410016 PDCD6IPQ8WUM4 868 aaKnown RBP16.07■□□□□ 0.16
HOXD3-202ENST00000410016 CASP10Q92851 521 aa16.07■□□□□ 0.16
HOXD3-202ENST00000410016 CCDC28BQ9BUN5 200 aa16.07■□□□□ 0.16
HOXD3-202ENST00000410016 TRIM62Q9BVG3 475 aa16.07■□□□□ 0.16
HOXD3-202ENST00000410016 ABCC13Q9NSE7 274 aa16.07■□□□□ 0.16
HOXD3-202ENST00000410016 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.07■□□□□ 0.16
HOXD3-202ENST00000410016 MRPL42Q9Y6G3 142 aaKnown RBP16.07■□□□□ 0.16
HOXD3-202ENST00000410016 TNFRSF10BO14763 440 aa16.06■□□□□ 0.16
HOXD3-202ENST00000410016 MGEA5O60502 916 aa16.06■□□□□ 0.16
HOXD3-202ENST00000410016 SMIM24O75264 130 aa16.06■□□□□ 0.16
HOXD3-202ENST00000410016 PMPCBO75439 489 aa16.06■□□□□ 0.16
HOXD3-202ENST00000410016 CCR1P32246 355 aa16.06■□□□□ 0.16
HOXD3-202ENST00000410016 HTR7P34969 479 aa16.06■□□□□ 0.16
HOXD3-202ENST00000410016 GEMP55040 296 aa16.06■□□□□ 0.16
HOXD3-202ENST00000410016 AQP4P55087 323 aa16.06■□□□□ 0.16
HOXD3-202ENST00000410016 CYLC2Q14093 348 aaPredicted RBP16.06■□□□□ 0.16
HOXD3-202ENST00000410016 PIGGQ5H8A4 983 aa16.06■□□□□ 0.16
HOXD3-202ENST00000410016 EP400NLQ6ZTU2 488 aa16.06■□□□□ 0.16
HOXD3-202ENST00000410016 ACAD11Q709F0 780 aa16.06■□□□□ 0.16
HOXD3-202ENST00000410016 SCD5Q86SK9 330 aa16.06■□□□□ 0.16
HOXD3-202ENST00000410016 METTL23Q86XA0 190 aa16.06■□□□□ 0.16
HOXD3-202ENST00000410016 ZNF483Q8TF39 744 aaPredicted RBP16.06■□□□□ 0.16
HOXD3-202ENST00000410016 HASPINQ8TF76 798 aa16.06■□□□□ 0.16
HOXD3-202ENST00000410016 UNKQ9C0B0 810 aaKnown RBP16.06■□□□□ 0.16
HOXD3-202ENST00000410016 UBE2OQ9C0C9 1292 aaKnown RBP16.06■□□□□ 0.16
HOXD3-202ENST00000410016 TRPV6Q9H1D0 765 aa16.06■□□□□ 0.16
HOXD3-202ENST00000410016 ATXN3LQ9H3M9 355 aa16.06■□□□□ 0.16
HOXD3-202ENST00000410016 SMOC2Q9H3U7 446 aa16.06■□□□□ 0.16
HOXD3-202ENST00000410016 CATSPERBQ9H7T0 1116 aa16.06■□□□□ 0.16
HOXD3-202ENST00000410016 RBM22Q9NW64 420 aaKnown RBP eCLIP16.06■□□□□ 0.16
HOXD3-202ENST00000410016 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.06■□□□□ 0.16
HOXD3-202ENST00000410016 VPS28Q9UK41 221 aa16.06■□□□□ 0.16
HOXD3-202ENST00000410016 G3BP2Q9UN86 482 aaKnown RBP16.06■□□□□ 0.16
HOXD3-202ENST00000410016 AURKAO14965 403 aa16.06■□□□□ 0.16
HOXD3-202ENST00000410016 CHRNA4P43681 627 aa16.06■□□□□ 0.16
HOXD3-202ENST00000410016 MGAT3Q09327 533 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms