RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 TRPM6Q9BX84 2022 aa18.62■□□□□ 0.57
FXN-203ENST00000396366 ARID1BQ8NFD5 2236 aaPredicted RBP18.61■□□□□ 0.57
FXN-203ENST00000396366 A0A1B0GTH6 734 aa18.61■□□□□ 0.57
FXN-203ENST00000396366 KRIT1O00522 736 aa18.61■□□□□ 0.57
FXN-203ENST00000396366 BUB1O43683 1085 aa18.61■□□□□ 0.57
FXN-203ENST00000396366 THEGLP0DJG4 465 aa18.61■□□□□ 0.57
FXN-203ENST00000396366 SKILP12757 684 aa18.61■□□□□ 0.57
FXN-203ENST00000396366 CLDN6P56747 220 aa18.61■□□□□ 0.57
FXN-203ENST00000396366 CCDC15Q0P6D6 951 aa18.61■□□□□ 0.57
FXN-203ENST00000396366 MAPK8IP2Q13387 824 aaPredicted RBP18.61■□□□□ 0.57
FXN-203ENST00000396366 CA9Q16790 459 aa18.61■□□□□ 0.57
FXN-203ENST00000396366 INAVAQ3KP66 663 aa18.61■□□□□ 0.57
FXN-203ENST00000396366 DHRS13Q6UX07 377 aa18.61■□□□□ 0.57
FXN-203ENST00000396366 TMC6Q7Z403 805 aa18.61■□□□□ 0.57
FXN-203ENST00000396366 ARFGAP1Q8N6T3 406 aa18.61■□□□□ 0.57
FXN-203ENST00000396366 OR13H1Q8NG92 308 aa18.61■□□□□ 0.57
FXN-203ENST00000396366 OR2AP1Q8NGE2 309 aa18.61■□□□□ 0.57
FXN-203ENST00000396366 TRIM7Q9C029 511 aa18.61■□□□□ 0.57
FXN-203ENST00000396366 GGT7Q9UJ14 662 aa18.61■□□□□ 0.57
FXN-203ENST00000396366 COL5A1P20908 1838 aaPredicted RBP18.6■□□□□ 0.57
FXN-203ENST00000396366 GOLGA4Q13439 2230 aaKnown RBP18.6■□□□□ 0.57
FXN-203ENST00000396366 C16orf96A6NNT2 1141 aa18.6■□□□□ 0.57
FXN-203ENST00000396366 ENC1O14682 589 aa18.6■□□□□ 0.57
FXN-203ENST00000396366 RAD51BO15315 384 aa18.6■□□□□ 0.57
FXN-203ENST00000396366 PAK4O96013 591 aaPredicted RBP18.6■□□□□ 0.57
FXN-203ENST00000396366 ABL2P42684 1182 aa18.6■□□□□ 0.57
FXN-203ENST00000396366 OVGP1Q12889 678 aa18.6■□□□□ 0.57
FXN-203ENST00000396366 NR1I3Q14994 352 aa18.6■□□□□ 0.57
FXN-203ENST00000396366 MYLK3Q32MK0 819 aa18.6■□□□□ 0.57
FXN-203ENST00000396366 FILIP1LQ4L180 1135 aa18.6■□□□□ 0.57
FXN-203ENST00000396366 SFMBT2Q5VUG0 894 aa18.6■□□□□ 0.57
FXN-203ENST00000396366 PLEKHA7Q6IQ23 1121 aa18.6■□□□□ 0.57
FXN-203ENST00000396366 KDM7AQ6ZMT4 941 aa18.6■□□□□ 0.57
FXN-203ENST00000396366 GCNT7Q6ZNI0 430 aa18.6■□□□□ 0.57
FXN-203ENST00000396366 PLPP6Q8IY26 295 aa18.6■□□□□ 0.57
FXN-203ENST00000396366 SLC25A45Q8N413 288 aa18.6■□□□□ 0.57
FXN-203ENST00000396366 HMCESQ96FZ2 354 aa18.6■□□□□ 0.57
FXN-203ENST00000396366 VCPIP1Q96JH7 1222 aa18.6■□□□□ 0.57
FXN-203ENST00000396366 SLC17A9Q9BYT1 436 aa18.6■□□□□ 0.57
FXN-203ENST00000396366 AIPL1Q9NZN9 384 aa18.6■□□□□ 0.57
FXN-203ENST00000396366 ITM2BQ9Y287 266 aa18.6■□□□□ 0.57
FXN-203ENST00000396366 TDRD6O60522 2096 aaKnown RBP18.6■□□□□ 0.57
FXN-203ENST00000396366 CXorf51AA0A1B0GTR3 108 aa18.59■□□□□ 0.57
FXN-203ENST00000396366 RASA4BC9J798 803 aa18.59■□□□□ 0.57
FXN-203ENST00000396366 DDX3XO00571 662 aaKnown RBP eCLIP18.59■□□□□ 0.573e-36■■■■■ 27.3
FXN-203ENST00000396366 YKT6O15498 198 aa18.59■□□□□ 0.57
FXN-203ENST00000396366 SPINT1O43278 529 aa18.59■□□□□ 0.57
FXN-203ENST00000396366 RASA4O43374 803 aa18.59■□□□□ 0.57
FXN-203ENST00000396366 MAGEC1O60732 1142 aa18.59■□□□□ 0.57
FXN-203ENST00000396366 TMCC1O94876 653 aa18.59■□□□□ 0.57
FXN-203ENST00000396366 GSRP00390 522 aa18.59■□□□□ 0.57
FXN-203ENST00000396366 FTLP02792 175 aaPredicted RBP18.59■□□□□ 0.57
FXN-203ENST00000396366 UGT2B4P06133 528 aa18.59■□□□□ 0.57
FXN-203ENST00000396366 ITIH2P19823 946 aa18.59■□□□□ 0.57
FXN-203ENST00000396366 HNRNPA2B1P22626 353 aaKnown RBP18.59■□□□□ 0.57
FXN-203ENST00000396366 PSMA2P25787 234 aa18.59■□□□□ 0.57
FXN-203ENST00000396366 AKT2P31751 481 aa18.59■□□□□ 0.57
FXN-203ENST00000396366 GEMIN4P57678 1058 aaKnown RBP18.59■□□□□ 0.57
FXN-203ENST00000396366 ZNF805Q5CZA5 627 aa18.59■□□□□ 0.57
FXN-203ENST00000396366 LRRC73Q5JTD7 316 aa18.59■□□□□ 0.57
FXN-203ENST00000396366 SLC22A18ASQ8N1D0 253 aa18.59■□□□□ 0.57
FXN-203ENST00000396366 OXR1Q8N573 874 aa18.59■□□□□ 0.57
FXN-203ENST00000396366 FEM1CQ96JP0 617 aa18.59■□□□□ 0.57
FXN-203ENST00000396366 BMFQ96LC9 184 aa18.59■□□□□ 0.57
FXN-203ENST00000396366 KLHL32Q96NJ5 620 aa18.59■□□□□ 0.57
FXN-203ENST00000396366 PEBP4Q96S96 227 aa18.59■□□□□ 0.57
FXN-203ENST00000396366 EPAS1Q99814 870 aa18.59■□□□□ 0.57
FXN-203ENST00000396366 CALN1Q9BXU9 219 aa18.59■□□□□ 0.57
FXN-203ENST00000396366 TTYH3Q9C0H2 523 aa18.59■□□□□ 0.57
FXN-203ENST00000396366 PARVAQ9NVD7 372 aa18.59■□□□□ 0.57
FXN-203ENST00000396366 UCKL1Q9NWZ5 548 aa18.59■□□□□ 0.57
FXN-203ENST00000396366 PCSK1NQ9UHG2 260 aa18.59■□□□□ 0.57
FXN-203ENST00000396366 LAMA5O15230 3695 aa18.59■□□□□ 0.57
FXN-203ENST00000396366 PKD1L2Q7Z442 2459 aa18.59■□□□□ 0.57
FXN-203ENST00000396366 ANKRD11Q6UB99 2663 aaPredicted RBP18.58■□□□□ 0.57
FXN-203ENST00000396366 A0A1W2PQC6 194 aa18.58■□□□□ 0.56
FXN-203ENST00000396366 SYCE3A1L190 88 aa18.58■□□□□ 0.56
FXN-203ENST00000396366 POM121BA6NF01 834 aa18.58■□□□□ 0.56
FXN-203ENST00000396366 TMEM191CA6NGB0 347 aa18.58■□□□□ 0.56
FXN-203ENST00000396366 IGLON5A6NGN9 336 aa18.58■□□□□ 0.56
FXN-203ENST00000396366 WASH4PA8MWX3 477 aa18.58■□□□□ 0.56
FXN-203ENST00000396366 TRIM38O00635 465 aa18.58■□□□□ 0.56
FXN-203ENST00000396366 INSIG1O15503 277 aa18.58■□□□□ 0.56
FXN-203ENST00000396366 POP4O95707 220 aaKnown RBP18.58■□□□□ 0.56
FXN-203ENST00000396366 SNRPD1P62314 119 aaKnown RBP18.58■□□□□ 0.56
FXN-203ENST00000396366 RPS21P63220 83 aaKnown RBP18.58■□□□□ 0.56
FXN-203ENST00000396366 SERINC3Q13530 473 aa18.58■□□□□ 0.56
FXN-203ENST00000396366 CYTH1Q15438 398 aa18.58■□□□□ 0.56
FXN-203ENST00000396366 ZNF542PQ5EBM4 170 aa18.58■□□□□ 0.56
FXN-203ENST00000396366 Q6ZSR6 202 aa18.58■□□□□ 0.56
FXN-203ENST00000396366 MDM1Q8TC05 714 aa18.58■□□□□ 0.56
FXN-203ENST00000396366 CELF6Q96J87 481 aaKnown RBP18.58■□□□□ 0.56
FXN-203ENST00000396366 CBX8Q9HC52 389 aa18.58■□□□□ 0.56
FXN-203ENST00000396366 J3KR12 359 aa18.57■□□□□ 0.56
FXN-203ENST00000396366 AP1G1O43747 822 aa18.57■□□□□ 0.56
FXN-203ENST00000396366 SERPINC1P01008 464 aa18.57■□□□□ 0.56
FXN-203ENST00000396366 PRKCIP41743 596 aa18.57■□□□□ 0.56
FXN-203ENST00000396366 AIF1P55008 147 aa18.57■□□□□ 0.56
FXN-203ENST00000396366 YBEYP58557 167 aaPredicted RBP18.57■□□□□ 0.56
FXN-203ENST00000396366 TPI1P60174 286 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms