RNA–Protein interactions for RNA: ENST00000390846.1

SNORA40.19-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.19-201ENST00000390846 SELENONQ9NZV5 590 aa2.29□□□□□ -2.04
SNORA40.19-201ENST00000390846 HSPB7Q9UBY9 170 aa2.29□□□□□ -2.04
SNORA40.19-201ENST00000390846 XPO7Q9UIA9 1087 aaKnown RBP2.29□□□□□ -2.04
SNORA40.19-201ENST00000390846 CA14Q9ULX7 337 aa2.29□□□□□ -2.04
SNORA40.19-201ENST00000390846 TMEM5Q9Y2B1 443 aa2.29□□□□□ -2.04
SNORA40.19-201ENST00000390846 PTRH2Q9Y3E5 179 aaKnown RBP2.29□□□□□ -2.04
SNORA40.19-201ENST00000390846 LYVE1Q9Y5Y7 322 aa2.29□□□□□ -2.04
SNORA40.19-201ENST00000390846 CDY1Q9Y6F8 540 aa2.29□□□□□ -2.04
SNORA40.19-201ENST00000390846 A0A0U1RQK1 487 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 ZNF320A2RRD8 509 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 OR2A25A4D2G3 310 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 SH2D7A6NKC9 451 aaPredicted RBP2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 PRR23D1E9PI22 279 aaPredicted RBP2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 SNAP23O00161 211 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 PLOD2O00469 737 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 CAPN9O14815 690 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 FYB1O15117 783 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 ZSCAN9O15535 394 aaPredicted RBP2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 TRIAP1O43715 76 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 SYNCRIPO60506 623 aaKnown RBP2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 DIAPH2O60879 1101 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 COQ9O75208 318 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 SLCO2B1O94956 709 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 SEC31AO94979 1220 aaKnown RBP2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 BMP15O95972 392 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 TOMM40O96008 361 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 VIPP01282 170 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 AFPP02771 609 aaKnown RBP2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 SPARCP09486 303 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 HMOX1P09601 288 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 PRR23D2P0DMB1 279 aaPredicted RBP2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 HSPA1AP0DMV8 641 aaKnown RBP2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 HSPA1BP0DMV9 641 aaKnown RBP2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 CYP2A6P11509 494 aaPredicted RBP2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 PRF1P14222 555 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 PTPN2P17706 415 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 GABRB1P18505 474 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 TNFRSF1BP20333 461 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 EDN2P20800 178 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 CPT2P23786 658 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 YY1P25490 414 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 PSMA4P25789 261 aaKnown RBP2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 NFKBIAP25963 317 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 ATP5DP30049 168 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 ARL3P36405 182 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 PSMB10P40306 273 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 PBX1P40424 430 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 PAFAH1B1P43034 410 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 CDK7P50613 346 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 ZNF132P52740 706 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 CDH15P55291 814 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 WNT3P56703 355 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 EEFSECP57772 596 aaKnown RBP2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 FOXL2P58012 376 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 LILRA4P59901 499 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 POLR2FP61218 127 aaKnown RBP2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 HOXA4Q00056 320 aaPredicted RBP2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 PSG6Q00889 435 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 BFSP1Q12934 665 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 COASYQ13057 564 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 CAMK2DQ13557 499 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 LY6KQ17RY6 165 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 ZNF260Q3ZCT1 412 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 FBXO43Q4G163 708 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 KRBOX4Q5JUW0 171 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 DEPDC1Q5TB30 811 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 LIPMQ5VYY2 423 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 GPR139Q6DWJ6 353 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 GRHL2Q6ISB3 625 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 KLHL35Q6PF15 583 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 KLHL24Q6TFL4 600 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 KIRREL2Q6UWL6 708 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 C16orf89Q6UX73 402 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 TMEM108Q6UXF1 575 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 NAPRTQ6XQN6 538 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 Q6ZWC4 215 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 CHST9Q7L1S5 443 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 SDCCAG8Q86SQ7 713 aaPredicted RBP2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 SLC9B2Q86UD5 537 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 TRABD2AQ86V40 505 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 NLRP14Q86W24 1093 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 SCN4BQ8IWT1 228 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 FAM217AQ8IXS0 508 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 RPAP2Q8IXW5 612 aaPredicted RBP2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 USP38Q8NB14 1042 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 ZNF540Q8NDQ6 660 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 GABPB2Q8TAK5 448 aaPredicted RBP2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 DNAJB14Q8TBM8 379 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 BPIFB1Q8TDL5 484 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 DENND1AQ8TEH3 1009 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 TMEM171Q8WVE6 324 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 MR1Q95460 341 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 PPP2R3CQ969Q6 453 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 KAZALD1Q96I82 304 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 PPP1R13BQ96KQ4 1090 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 CMTM3Q96MX0 182 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 SLC46A1Q96NT5 459 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 HGH1Q9BTY7 390 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 ACAT2Q9BWD1 397 aa2.28□□□□□ -2.04
SNORA40.19-201ENST00000390846 TTYH3Q9C0H2 523 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms