RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 CA9Q16790 459 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 GPIHBP1Q8IV16 184 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 NIM1KQ8IY84 436 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 HEPHQ9BQS7 1158 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 SETD4Q9NVD3 440 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 KCNH4Q9UQ05 1017 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 RPRD2Q5VT52 1461 aaKnown RBP6.69□□□□□ -1.34
UBR4-204ENST00000375254 CCNT2O60583 730 aaKnown RBP6.69□□□□□ -1.34
UBR4-204ENST00000375254 GUCY1A2P33402 732 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 ZNF283Q8N7M2 679 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 UNC93B1Q9H1C4 597 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 IFT22Q9H7X7 185 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 TBC1D22BQ9NU19 505 aa6.69□□□□□ -1.34
UBR4-204ENST00000375254 RUVBL1Q9Y265 456 aaKnown RBP6.69□□□□□ -1.34
UBR4-204ENST00000375254 RRM1P23921 792 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 CHMP24386 653 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 PON3Q15166 354 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 CLPPQ16740 277 aaPredicted RBP6.68□□□□□ -1.34
UBR4-204ENST00000375254 MOB2Q70IA6 237 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 SEC14L1Q92503 715 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 A0A087X1B8 175 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 FAM237BA0A1B0GVD1 139 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 ADAM12O43184 909 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 FBXO21O94952 628 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 NPPAP01160 153 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 PON1P27169 355 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 FOXD4Q12950 439 aaPredicted RBP6.68□□□□□ -1.34
UBR4-204ENST00000375254 SH3D19Q5HYK7 790 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 NKAPLQ5M9Q1 402 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 UNC5CLQ8IV45 518 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 KATNAL2Q8IYT4 538 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 ZBED3Q96IU2 234 aaPredicted RBP6.68□□□□□ -1.34
UBR4-204ENST00000375254 EIF2AK1Q9BQI3 630 aaKnown RBP6.68□□□□□ -1.34
UBR4-204ENST00000375254 TRHDEQ9UKU6 1024 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 RPS6KL1Q9Y6S9 549 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 MAU2Q9Y6X3 613 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 NEURL1BA8MQ27 555 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 STX16O14662 325 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 GALEQ14376 348 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 TICAM1Q8IUC6 712 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 CARNMT1Q8N4J0 409 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 FBXO36Q8NEA4 188 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 ANGPTL6Q8NI99 470 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 TMEM246Q9BRR3 403 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 CD274Q9NZQ7 290 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 MAGEL2Q9UJ55 1249 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 PCDHGB1Q9Y5G3 927 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 ALDH6A1Q02252 535 aaKnown RBP6.68□□□□□ -1.34
UBR4-204ENST00000375254 GNA12Q03113 381 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 PTF1AQ7RTS3 328 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 CPXM1Q96SM3 734 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.68□□□□□ -1.34
UBR4-204ENST00000375254 AP4E1Q9UPM8 1137 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 RAP2CQ9Y3L5 183 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 NR2E1Q9Y466 385 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 HERVK_113P62684 666 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 PSMD5Q16401 504 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 ZNF517Q6ZMY9 492 aaPredicted RBP6.68□□□□□ -1.34
UBR4-204ENST00000375254 CDH1P12830 882 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 NAT1P18440 290 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 DNAJB1P25685 340 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 ZNF135P52742 658 aaPredicted RBP6.68□□□□□ -1.34
UBR4-204ENST00000375254 NSUN2Q08J23 767 aaKnown RBP eCLIP6.68□□□□□ -1.34
UBR4-204ENST00000375254 ADGRE1Q14246 886 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 SNAPC1Q16533 368 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 CARTPTQ16568 116 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 TXNRD1Q16881 649 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 N4BP2L1Q5TBK1 243 aaPredicted RBP6.68□□□□□ -1.34
UBR4-204ENST00000375254 CATSPER4Q7RTX7 472 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 METTL3Q86U44 580 aaKnown RBP6.68□□□□□ -1.34
UBR4-204ENST00000375254 GRAMD2AQ8IUY3 354 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 SEMA6AQ9H2E6 1030 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 ASXL1Q8IXJ9 1541 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 CYP2C8P10632 490 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 PIK3R6Q5UE93 754 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 PPP1R14AQ96A00 147 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 C9IYK1 514 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 ITGB1P05556 798 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 CRHR1P34998 444 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 CHI3L1P36222 383 aaPredicted RBP6.68□□□□□ -1.34
UBR4-204ENST00000375254 TTLL9Q3SXZ7 439 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 PRKD2Q9BZL6 878 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 RPL17P18621 184 aaKnown RBP6.68□□□□□ -1.34
UBR4-204ENST00000375254 TFEBP19484 476 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 GABRB2P47870 512 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 EZH2Q15910 746 aaKnown RBP6.68□□□□□ -1.34
UBR4-204ENST00000375254 ZNF699Q32M78 642 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 SPANXN3Q5MJ09 141 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 KCNV1Q6PIU1 500 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 ZNF773Q6PK81 442 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 MARVELD2Q8N4S9 558 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 SEPHS2Q99611 448 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 MTMR12Q9C0I1 747 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 NGRNQ9NPE2 291 aaKnown RBP6.68□□□□□ -1.34
UBR4-204ENST00000375254 SPASTQ9UBP0 616 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 PRKAG3Q9UGI9 489 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 GINS2Q9Y248 185 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 BLMP54132 1417 aaPredicted RBP6.68□□□□□ -1.34
UBR4-204ENST00000375254 SLITRK5O94991 958 aa6.68□□□□□ -1.34
UBR4-204ENST00000375254 SLC25A3Q00325 362 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms