RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 SETSIPP0DME0 302 aa10.73□□□□□ -0.69
SMC3-201ENST00000361804 ETFBP38117 255 aa10.73□□□□□ -0.69
SMC3-201ENST00000361804 FBXO48Q5FWF7 155 aa10.73□□□□□ -0.69
SMC3-201ENST00000361804 RBM20Q5T481 1227 aaKnown RBP10.73□□□□□ -0.69
SMC3-201ENST00000361804 MYO1HQ8N1T3 1032 aa10.73□□□□□ -0.69
SMC3-201ENST00000361804 PHF21BQ96EK2 531 aa10.73□□□□□ -0.69
SMC3-201ENST00000361804 LRCH3Q96II8 777 aa10.73□□□□□ -0.69
SMC3-201ENST00000361804 IL1RL2Q9HB29 575 aa10.73□□□□□ -0.69
SMC3-201ENST00000361804 FBRSL1Q9HCM7 1045 aaKnown RBP10.73□□□□□ -0.69
SMC3-201ENST00000361804 WDR6Q9NNW5 1121 aaKnown RBP10.73□□□□□ -0.69
SMC3-201ENST00000361804 NDFIP2Q9NV92 336 aa10.73□□□□□ -0.69
SMC3-201ENST00000361804 IGSF9Q9P2J2 1179 aa10.73□□□□□ -0.69
SMC3-201ENST00000361804 MYBPHLA2RUH7 354 aa10.72□□□□□ -0.69
SMC3-201ENST00000361804 E7ENX8 843 aa10.72□□□□□ -0.69
SMC3-201ENST00000361804 FOXD2O60548 495 aaPredicted RBP10.72□□□□□ -0.69
SMC3-201ENST00000361804 RPL34P49207 117 aaKnown RBP10.72□□□□□ -0.69
SMC3-201ENST00000361804 SLC26A2P50443 739 aa10.72□□□□□ -0.69
SMC3-201ENST00000361804 UBXN11Q5T124 520 aa10.72□□□□□ -0.69
SMC3-201ENST00000361804 C4orf22Q6V702 233 aa10.72□□□□□ -0.69
SMC3-201ENST00000361804 DIS3LQ8TF46 1054 aaKnown RBP10.72□□□□□ -0.69
SMC3-201ENST00000361804 DNAJB3Q8WWF6 145 aa10.72□□□□□ -0.69
SMC3-201ENST00000361804 MAML3Q96JK9 1138 aa10.72□□□□□ -0.69
SMC3-201ENST00000361804 SIKE1Q9BRV8 207 aa10.72□□□□□ -0.69
SMC3-201ENST00000361804 CASS4Q9NQ75 786 aa10.72□□□□□ -0.69
SMC3-201ENST00000361804 TMX2-CTNND1H3BSU7 103 aa10.72□□□□□ -0.69
SMC3-201ENST00000361804 PMPCBO75439 489 aa10.72□□□□□ -0.69
SMC3-201ENST00000361804 THRAP10827 490 aa10.72□□□□□ -0.69
SMC3-201ENST00000361804 PPARGP37231 505 aaPredicted RBP10.72□□□□□ -0.69
SMC3-201ENST00000361804 NSUN2Q08J23 767 aaKnown RBP eCLIP10.72□□□□□ -0.69
SMC3-201ENST00000361804 KCTD11Q693B1 232 aa10.72□□□□□ -0.69
SMC3-201ENST00000361804 CLEC6AQ6EIG7 209 aa10.72□□□□□ -0.69
SMC3-201ENST00000361804 SLC27A1Q6PCB7 646 aa10.72□□□□□ -0.69
SMC3-201ENST00000361804 ZBTB46Q86UZ6 589 aa10.72□□□□□ -0.69
SMC3-201ENST00000361804 EXOC8Q8IYI6 725 aa10.72□□□□□ -0.69
SMC3-201ENST00000361804 HIC2Q96JB3 615 aa10.72□□□□□ -0.69
SMC3-201ENST00000361804 SLC29A1Q99808 456 aa10.72□□□□□ -0.69
SMC3-201ENST00000361804 MRPL1Q9BYD6 325 aaKnown RBP10.72□□□□□ -0.69
SMC3-201ENST00000361804 EIF2B3Q9NR50 452 aaKnown RBP10.72□□□□□ -0.69
SMC3-201ENST00000361804 GTF2IRD1Q9UHL9 959 aa10.72□□□□□ -0.69
SMC3-201ENST00000361804 RAP2CQ9Y3L5 183 aa10.72□□□□□ -0.69
SMC3-201ENST00000361804 MAGEB3O15480 346 aa10.72□□□□□ -0.69
SMC3-201ENST00000361804 SLC25A27O95847 323 aa10.72□□□□□ -0.69
SMC3-201ENST00000361804 MMP3P08254 477 aa10.72□□□□□ -0.69
SMC3-201ENST00000361804 CKMT2P17540 419 aa10.72□□□□□ -0.69
SMC3-201ENST00000361804 YWHAQP27348 245 aa10.72□□□□□ -0.69
SMC3-201ENST00000361804 LILRA4P59901 499 aa10.72□□□□□ -0.69
SMC3-201ENST00000361804 C1QTNF8P60827 252 aa10.72□□□□□ -0.69
SMC3-201ENST00000361804 SEPT6Q14141 434 aa10.72□□□□□ -0.69
SMC3-201ENST00000361804 PCSK7Q16549 785 aa10.72□□□□□ -0.69
SMC3-201ENST00000361804 LIPMQ5VYY2 423 aa10.72□□□□□ -0.69
SMC3-201ENST00000361804 ZDHHC17Q8IUH5 632 aa10.72□□□□□ -0.69
SMC3-201ENST00000361804 CIB1Q99828 191 aa10.72□□□□□ -0.69
SMC3-201ENST00000361804 PAAF1Q9BRP4 392 aa10.72□□□□□ -0.69
SMC3-201ENST00000361804 DRC3Q9H069 523 aa10.72□□□□□ -0.69
SMC3-201ENST00000361804 TRPC7Q9HCX4 862 aa10.72□□□□□ -0.69
SMC3-201ENST00000361804 CDYLQ9Y232 598 aa10.72□□□□□ -0.69
SMC3-201ENST00000361804 PIRO00625 290 aa10.71□□□□□ -0.69
SMC3-201ENST00000361804 LRIG2O94898 1065 aa10.71□□□□□ -0.69
SMC3-201ENST00000361804 PGFP49763 221 aa10.71□□□□□ -0.69
SMC3-201ENST00000361804 CSHL1Q14406 222 aa10.71□□□□□ -0.69
SMC3-201ENST00000361804 PAFAH1B3Q15102 231 aaKnown RBP10.71□□□□□ -0.69
SMC3-201ENST00000361804 LRRC8EQ6NSJ5 796 aa10.71□□□□□ -0.69
SMC3-201ENST00000361804 ZYG11AQ6WRX3 759 aa10.71□□□□□ -0.69
SMC3-201ENST00000361804 USP50Q70EL3 339 aaPredicted RBP10.71□□□□□ -0.69
SMC3-201ENST00000361804 CRYBG2Q8N1P7 616 aa10.71□□□□□ -0.69
SMC3-201ENST00000361804 EXT2Q93063 718 aa10.71□□□□□ -0.69
SMC3-201ENST00000361804 DUSP16Q9BY84 665 aa10.71□□□□□ -0.69
SMC3-201ENST00000361804 TKTL2Q9H0I9 626 aa10.71□□□□□ -0.69
SMC3-201ENST00000361804 VCX3BQ9H321 246 aa10.71□□□□□ -0.69
SMC3-201ENST00000361804 COQ10BQ9H8M1 238 aa10.71□□□□□ -0.69
SMC3-201ENST00000361804 CRTAC1Q9NQ79 661 aa10.71□□□□□ -0.69
SMC3-201ENST00000361804 RHBDL2Q9NX52 303 aa10.71□□□□□ -0.69
SMC3-201ENST00000361804 COMMD3-BMI1R4GMX3 469 aa10.71□□□□□ -0.69
SMC3-201ENST00000361804 HUS1O60921 280 aa10.71□□□□□ -0.69
SMC3-201ENST00000361804 STAU1O95793 577 aaKnown RBP10.71□□□□□ -0.69
SMC3-201ENST00000361804 NPR3P17342 541 aa10.71□□□□□ -0.69
SMC3-201ENST00000361804 ARNTP27540 789 aa10.71□□□□□ -0.69
SMC3-201ENST00000361804 NOS2P35228 1153 aa10.71□□□□□ -0.69
SMC3-201ENST00000361804 TAS2R39P59534 338 aa10.71□□□□□ -0.69
SMC3-201ENST00000361804 MTX3Q5HYI7 312 aa10.71□□□□□ -0.69
SMC3-201ENST00000361804 KDM1BQ8NB78 822 aa10.71□□□□□ -0.69
SMC3-201ENST00000361804 SHCBP1Q8NEM2 672 aa10.71□□□□□ -0.69
SMC3-201ENST00000361804 ELMO2Q96JJ3 720 aa10.71□□□□□ -0.69
SMC3-201ENST00000361804 SENP6Q9GZR1 1112 aaPredicted RBP10.71□□□□□ -0.69
SMC3-201ENST00000361804 POMKQ9H5K3 350 aa10.71□□□□□ -0.69
SMC3-201ENST00000361804 MBLAC1A4D2B0 266 aaPredicted RBP10.71□□□□□ -0.7
SMC3-201ENST00000361804 PDHXO00330 501 aa10.71□□□□□ -0.7
SMC3-201ENST00000361804 PPP6CO00743 305 aa10.71□□□□□ -0.7
SMC3-201ENST00000361804 TPST1O60507 370 aa10.71□□□□□ -0.7
SMC3-201ENST00000361804 DAB1O75553 588 aa10.71□□□□□ -0.7
SMC3-201ENST00000361804 MYL4P12829 197 aa10.71□□□□□ -0.7
SMC3-201ENST00000361804 SCNN1BP51168 640 aa10.71□□□□□ -0.7
SMC3-201ENST00000361804 PTK2BQ14289 1009 aa10.71□□□□□ -0.7
SMC3-201ENST00000361804 RARS2Q5T160 578 aaKnown RBP10.71□□□□□ -0.7
SMC3-201ENST00000361804 UNC93AQ86WB7 457 aa10.71□□□□□ -0.7
SMC3-201ENST00000361804 HASPINQ8TF76 798 aa10.71□□□□□ -0.7
SMC3-201ENST00000361804 PDCD6IPQ8WUM4 868 aaKnown RBP10.71□□□□□ -0.7
SMC3-201ENST00000361804 HEXDCQ8WVB3 486 aa10.71□□□□□ -0.7
SMC3-201ENST00000361804 ZBTB26Q9HCK0 441 aa10.71□□□□□ -0.7
SMC3-201ENST00000361804 VCX3AQ9NNX9 186 aa10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms