RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 LRRC3Q9BY71 257 aa14.09□□□□□ -0.15
CSNK1E-201ENST00000359867 GBA3Q9H227 469 aa14.09□□□□□ -0.15
CSNK1E-201ENST00000359867 NSUN3Q9H649 340 aaKnown RBP14.09□□□□□ -0.15
CSNK1E-201ENST00000359867 TRPM5Q9NZQ8 1165 aa14.09□□□□□ -0.15
CSNK1E-201ENST00000359867 A0A1W2PRU2 124 aa14.08□□□□□ -0.16
CSNK1E-201ENST00000359867 FAM159BA6NKW6 160 aa14.08□□□□□ -0.16
CSNK1E-201ENST00000359867 WASH4PA8MWX3 477 aa14.08□□□□□ -0.16
CSNK1E-201ENST00000359867 ALDH1A2O94788 518 aa14.08□□□□□ -0.16
CSNK1E-201ENST00000359867 MT-ND3P03897 115 aa14.08□□□□□ -0.16
CSNK1E-201ENST00000359867 F11P03951 625 aa14.08□□□□□ -0.16
CSNK1E-201ENST00000359867 CCR2P41597 374 aa14.08□□□□□ -0.16
CSNK1E-201ENST00000359867 MLLT6P55198 1093 aaPredicted RBP14.08□□□□□ -0.16
CSNK1E-201ENST00000359867 STXBP5Q5T5C0 1151 aa14.08□□□□□ -0.16
CSNK1E-201ENST00000359867 ACBD5Q5T8D3 534 aaPredicted RBP14.08□□□□□ -0.16
CSNK1E-201ENST00000359867 LRRC49Q8IUZ0 686 aa14.08□□□□□ -0.16
CSNK1E-201ENST00000359867 MPP5Q8N3R9 675 aa14.08□□□□□ -0.16
CSNK1E-201ENST00000359867 KLF6Q99612 283 aaPredicted RBP14.08□□□□□ -0.16
CSNK1E-201ENST00000359867 OSBPL1AQ9BXW6 950 aa14.08□□□□□ -0.16
CSNK1E-201ENST00000359867 CEP41Q9BYV8 373 aa14.08□□□□□ -0.16
CSNK1E-201ENST00000359867 TRPC7Q9HCX4 862 aa14.08□□□□□ -0.16
CSNK1E-201ENST00000359867 MOCS1Q9NZB8 636 aa14.08□□□□□ -0.16
CSNK1E-201ENST00000359867 ASB3Q9Y575 518 aa14.08□□□□□ -0.16
CSNK1E-201ENST00000359867 TM9SF1O15321 606 aa14.08□□□□□ -0.16
CSNK1E-201ENST00000359867 PSMD3O43242 534 aa14.08□□□□□ -0.16
CSNK1E-201ENST00000359867 KRT37O76014 449 aa14.08□□□□□ -0.16
CSNK1E-201ENST00000359867 AP2A1O95782 977 aa14.08□□□□□ -0.16
CSNK1E-201ENST00000359867 OVGP1Q12889 678 aa14.08□□□□□ -0.16
CSNK1E-201ENST00000359867 KCNC3Q14003 757 aa14.08□□□□□ -0.16
CSNK1E-201ENST00000359867 ADGRE1Q14246 886 aa14.08□□□□□ -0.16
CSNK1E-201ENST00000359867 TXNDC8Q6A555 127 aa14.08□□□□□ -0.16
CSNK1E-201ENST00000359867 RBM12BQ8IXT5 1001 aaKnown RBP14.08□□□□□ -0.16
CSNK1E-201ENST00000359867 LRRC8CQ8TDW0 803 aa14.08□□□□□ -0.16
CSNK1E-201ENST00000359867 TTC17Q96AE7 1141 aa14.08□□□□□ -0.16
CSNK1E-201ENST00000359867 ZNF707Q96C28 371 aaPredicted RBP14.08□□□□□ -0.16
CSNK1E-201ENST00000359867 TCEAL4Q96EI5 215 aa14.08□□□□□ -0.16
CSNK1E-201ENST00000359867 TEKT5Q96M29 485 aa14.08□□□□□ -0.16
CSNK1E-201ENST00000359867 RAB3IPQ96QF0 476 aaPredicted RBP14.08□□□□□ -0.16
CSNK1E-201ENST00000359867 SLC22A12Q96S37 553 aa14.08□□□□□ -0.16
CSNK1E-201ENST00000359867 NPHS2Q9NP85 383 aa14.08□□□□□ -0.16
CSNK1E-201ENST00000359867 ASAH2Q9NR71 780 aa14.08□□□□□ -0.16
CSNK1E-201ENST00000359867 DNMT3BQ9UBC3 853 aaKnown RBP14.08□□□□□ -0.16
CSNK1E-201ENST00000359867 NUMBLQ9Y6R0 609 aa14.08□□□□□ -0.16
CSNK1E-201ENST00000359867 GOLGA8RI6L899 631 aa14.07□□□□□ -0.16
CSNK1E-201ENST00000359867 ZBTB24O43167 697 aaPredicted RBP14.07□□□□□ -0.16
CSNK1E-201ENST00000359867 HMBSP08397 361 aa14.07□□□□□ -0.16
CSNK1E-201ENST00000359867 SNRPAP09012 282 aaKnown RBP14.07□□□□□ -0.16
CSNK1E-201ENST00000359867 T-ENOLP0DO92 83 aa14.07□□□□□ -0.16
CSNK1E-201ENST00000359867 PGAM1P18669 254 aa14.07□□□□□ -0.16
CSNK1E-201ENST00000359867 TBX4P57082 545 aa14.07□□□□□ -0.16
CSNK1E-201ENST00000359867 SLC18A2Q05940 514 aa14.07□□□□□ -0.16
CSNK1E-201ENST00000359867 ARTNQ5T4W7 220 aa14.07□□□□□ -0.16
CSNK1E-201ENST00000359867 RGS9BPQ6ZS82 235 aa14.07□□□□□ -0.16
CSNK1E-201ENST00000359867 GRASPQ7Z6J2 395 aaPredicted RBP14.07□□□□□ -0.16
CSNK1E-201ENST00000359867 CTAGE3PQ8IX95 158 aa14.07□□□□□ -0.16
CSNK1E-201ENST00000359867 GALNT15Q8N3T1 639 aa14.07□□□□□ -0.16
CSNK1E-201ENST00000359867 PPM1NQ8N819 430 aa14.07□□□□□ -0.16
CSNK1E-201ENST00000359867 BANPQ8N9N5 519 aa14.07□□□□□ -0.16
CSNK1E-201ENST00000359867 FAM13CQ8NE31 585 aa14.07□□□□□ -0.16
CSNK1E-201ENST00000359867 PDZD8Q8NEN9 1154 aa14.07□□□□□ -0.16
CSNK1E-201ENST00000359867 GRAMD1AQ96CP6 724 aa14.07□□□□□ -0.16
CSNK1E-201ENST00000359867 MTBPQ96DY7 904 aa14.07□□□□□ -0.16
CSNK1E-201ENST00000359867 CYP2S1Q96SQ9 504 aa14.07□□□□□ -0.16
CSNK1E-201ENST00000359867 RNF38Q9H0F5 515 aa14.07□□□□□ -0.16
CSNK1E-201ENST00000359867 UXTQ9UBK9 157 aaPredicted RBP14.07□□□□□ -0.16
CSNK1E-201ENST00000359867 DCTN4Q9UJW0 460 aa14.07□□□□□ -0.16
CSNK1E-201ENST00000359867 HS3ST4Q9Y661 456 aa14.07□□□□□ -0.16
CSNK1E-201ENST00000359867 USH1CQ9Y6N9 552 aa14.07□□□□□ -0.16
CSNK1E-201ENST00000359867 E9PAM4 449 aa14.07□□□□□ -0.16
CSNK1E-201ENST00000359867 AP3B1O00203 1094 aa14.07□□□□□ -0.16
CSNK1E-201ENST00000359867 COCHO43405 550 aa14.07□□□□□ -0.16
CSNK1E-201ENST00000359867 PEX11AO75192 247 aa14.07□□□□□ -0.16
CSNK1E-201ENST00000359867 IGFBP4P22692 258 aa14.07□□□□□ -0.16
CSNK1E-201ENST00000359867 SERPINB9P50453 376 aa14.07□□□□□ -0.16
CSNK1E-201ENST00000359867 NAB1Q13506 487 aa14.07□□□□□ -0.16
CSNK1E-201ENST00000359867 PRPF38BQ5VTL8 546 aaKnown RBP14.07□□□□□ -0.16
CSNK1E-201ENST00000359867 KCTD11Q693B1 232 aa14.07□□□□□ -0.16
CSNK1E-201ENST00000359867 LVRNQ6Q4G3 990 aa14.07□□□□□ -0.16
CSNK1E-201ENST00000359867 ARHGAP12Q8IWW6 846 aa14.07□□□□□ -0.16
CSNK1E-201ENST00000359867 KLHDC8BQ8IXV7 354 aa14.07□□□□□ -0.16
CSNK1E-201ENST00000359867 ZSCAN18Q8TBC5 510 aaPredicted RBP14.07□□□□□ -0.16
CSNK1E-201ENST00000359867 PPP2R3CQ969Q6 453 aa14.07□□□□□ -0.16
CSNK1E-201ENST00000359867 YIPF2Q9BWQ6 316 aa14.07□□□□□ -0.16
CSNK1E-201ENST00000359867 TBC1D10AQ9BXI6 508 aa14.07□□□□□ -0.16
CSNK1E-201ENST00000359867 PRKD2Q9BZL6 878 aa14.07□□□□□ -0.16
CSNK1E-201ENST00000359867 NACA2Q9H009 215 aa14.07□□□□□ -0.16
CSNK1E-201ENST00000359867 ATXN3LQ9H3M9 355 aa14.07□□□□□ -0.16
CSNK1E-201ENST00000359867 MARCH2Q9P0N8 246 aa14.07□□□□□ -0.16
CSNK1E-201ENST00000359867 STARD13Q9Y3M8 1113 aa14.07□□□□□ -0.16
CSNK1E-201ENST00000359867 NOTCH4Q99466 2003 aa14.06□□□□□ -0.16
CSNK1E-201ENST00000359867 CACNG3O60359 315 aa14.06□□□□□ -0.16
CSNK1E-201ENST00000359867 EDF1O60869 148 aaKnown RBP14.06□□□□□ -0.16
CSNK1E-201ENST00000359867 ENTPD5O75356 428 aa14.06□□□□□ -0.16
CSNK1E-201ENST00000359867 KRT38O76015 456 aa14.06□□□□□ -0.16
CSNK1E-201ENST00000359867 RHOP08100 348 aa14.06□□□□□ -0.16
CSNK1E-201ENST00000359867 CD68P34810 354 aaPredicted RBP14.06□□□□□ -0.16
CSNK1E-201ENST00000359867 CCDC15Q0P6D6 951 aa14.06□□□□□ -0.16
CSNK1E-201ENST00000359867 ZBTB17Q13105 803 aa14.06□□□□□ -0.16
CSNK1E-201ENST00000359867 PRPSAP1Q14558 356 aa14.06□□□□□ -0.16
CSNK1E-201ENST00000359867 TRIP4Q15650 581 aaPredicted RBP14.06□□□□□ -0.16
CSNK1E-201ENST00000359867 TAF1BQ53T94 588 aaPredicted RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms