RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 PPP1R16AQ96I34 528 aa23.33■■□□□ 1.33
LSM4-201ENST00000252816 SERAC1Q96JX3 654 aa23.33■■□□□ 1.33
LSM4-201ENST00000252816 DEF6Q9H4E7 631 aa23.33■■□□□ 1.33
LSM4-201ENST00000252816 PDFQ9HBH1 243 aa23.33■■□□□ 1.33
LSM4-201ENST00000252816 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.33■■□□□ 1.33
LSM4-201ENST00000252816 TPX2Q9ULW0 747 aaKnown RBP23.33■■□□□ 1.33
LSM4-201ENST00000252816 MFHAS1Q9Y4C4 1052 aa23.33■■□□□ 1.33
LSM4-201ENST00000252816 A0A1W2PR77 199 aa23.32■■□□□ 1.32
LSM4-201ENST00000252816 KRIT1O00522 736 aa23.32■■□□□ 1.32
LSM4-201ENST00000252816 KCNK3O14649 394 aa23.32■■□□□ 1.32
LSM4-201ENST00000252816 VILLO15195 856 aa23.32■■□□□ 1.32
LSM4-201ENST00000252816 AKR1B10O60218 316 aa23.32■■□□□ 1.32
LSM4-201ENST00000252816 PRAMEF11O60813 436 aa23.32■■□□□ 1.32
LSM4-201ENST00000252816 RNGTTO60942 597 aaKnown RBP23.32■■□□□ 1.32
LSM4-201ENST00000252816 CER1O95813 267 aa23.32■■□□□ 1.32
LSM4-201ENST00000252816 CEACAM1P13688 526 aa23.32■■□□□ 1.32
LSM4-201ENST00000252816 CTSKP43235 329 aa23.32■■□□□ 1.32
LSM4-201ENST00000252816 PAPOLAP51003 745 aaKnown RBP23.32■■□□□ 1.32
LSM4-201ENST00000252816 CCDC15Q0P6D6 951 aa23.32■■□□□ 1.32
LSM4-201ENST00000252816 SLC14A1Q13336 389 aa23.32■■□□□ 1.32
LSM4-201ENST00000252816 CYTH1Q15438 398 aa23.32■■□□□ 1.32
LSM4-201ENST00000252816 TSR1Q2NL82 804 aaKnown RBP23.32■■□□□ 1.32
LSM4-201ENST00000252816 PARS2Q7L3T8 475 aaKnown RBP23.32■■□□□ 1.32
LSM4-201ENST00000252816 POLNQ7Z5Q5 900 aa23.32■■□□□ 1.32
LSM4-201ENST00000252816 TP53INP2Q8IXH6 220 aa23.32■■□□□ 1.32
LSM4-201ENST00000252816 AASDHPPTQ9NRN7 309 aa23.32■■□□□ 1.32
LSM4-201ENST00000252816 CTTNBP2NLQ9P2B4 639 aa23.32■■□□□ 1.32
LSM4-201ENST00000252816 UBA2Q9UBT2 640 aaPredicted RBP23.32■■□□□ 1.32
LSM4-201ENST00000252816 A0A1W2PQU0 124 aa23.31■■□□□ 1.32
LSM4-201ENST00000252816 ARHGAP42A6NI28 874 aa23.31■■□□□ 1.32
LSM4-201ENST00000252816 PCNX2A6NKB5 2137 aa23.31■■□□□ 1.32
LSM4-201ENST00000252816 H3BRJ5 948 aa23.31■■□□□ 1.32
LSM4-201ENST00000252816 POP4O95707 220 aaKnown RBP23.31■■□□□ 1.32
LSM4-201ENST00000252816 H2AFZP0C0S5 128 aa23.31■■□□□ 1.32
LSM4-201ENST00000252816 ADRB3P13945 408 aa23.31■■□□□ 1.32
LSM4-201ENST00000252816 CD38P28907 300 aa23.31■■□□□ 1.32
LSM4-201ENST00000252816 NEK3P51956 506 aa23.31■■□□□ 1.32
LSM4-201ENST00000252816 H2AFVQ71UI9 128 aa23.31■■□□□ 1.32
LSM4-201ENST00000252816 TEKT4Q8WW24 435 aa23.31■■□□□ 1.32
LSM4-201ENST00000252816 CTNNBL1Q8WYA6 563 aaPredicted RBP23.31■■□□□ 1.32
LSM4-201ENST00000252816 GDAP1L1Q96MZ0 367 aa23.31■■□□□ 1.32
LSM4-201ENST00000252816 CAMK1GQ96NX5 476 aa23.31■■□□□ 1.32
LSM4-201ENST00000252816 TRIM5Q9C035 493 aa23.31■■□□□ 1.32
LSM4-201ENST00000252816 RBSNQ9H1K0 784 aa23.31■■□□□ 1.32
LSM4-201ENST00000252816 NHEJ1Q9H9Q4 299 aaPredicted RBP23.31■■□□□ 1.32
LSM4-201ENST00000252816 SPTLC3Q9NUV7 552 aa23.31■■□□□ 1.32
LSM4-201ENST00000252816 ETNK2Q9NVF9 386 aa23.31■■□□□ 1.32
LSM4-201ENST00000252816 UVRAGQ9P2Y5 699 aa23.31■■□□□ 1.32
LSM4-201ENST00000252816 LHX3Q9UBR4 397 aa23.31■■□□□ 1.32
LSM4-201ENST00000252816 DOCK9Q9BZ29 2069 aa23.31■■□□□ 1.32
LSM4-201ENST00000252816 SH3BP5O60239 455 aa23.3■■□□□ 1.32
LSM4-201ENST00000252816 UGT2B4P06133 528 aa23.3■■□□□ 1.32
LSM4-201ENST00000252816 ZNF883P0CG24 379 aa23.3■■□□□ 1.32
LSM4-201ENST00000252816 AMPD1P23109 780 aa23.3■■□□□ 1.32
LSM4-201ENST00000252816 RHOAP61586 193 aa23.3■■□□□ 1.32
LSM4-201ENST00000252816 ZNF284Q2VY69 593 aa23.3■■□□□ 1.32
LSM4-201ENST00000252816 NAPEPLDQ6IQ20 393 aa23.3■■□□□ 1.32
LSM4-201ENST00000252816 NEK5Q6P3R8 708 aa23.3■■□□□ 1.32
LSM4-201ENST00000252816 ARHGAP36Q6ZRI8 547 aa23.3■■□□□ 1.32
LSM4-201ENST00000252816 KLK6Q92876 244 aa23.3■■□□□ 1.32
LSM4-201ENST00000252816 LRIG1Q96JA1 1093 aa23.3■■□□□ 1.32
LSM4-201ENST00000252816 EXOC2Q96KP1 924 aa23.3■■□□□ 1.32
LSM4-201ENST00000252816 CSPG4P5Q96PW8 444 aa23.3■■□□□ 1.32
LSM4-201ENST00000252816 PCDH18Q9HCL0 1135 aa23.3■■□□□ 1.32
LSM4-201ENST00000252816 TM7SF3Q9NS93 570 aa23.3■■□□□ 1.32
LSM4-201ENST00000252816 ZFR2Q9UPR6 939 aaKnown RBP23.3■■□□□ 1.32
LSM4-201ENST00000252816 DMTF1Q9Y222 760 aa23.3■■□□□ 1.32
LSM4-201ENST00000252816 CABIN1Q9Y6J0 2220 aa23.29■■□□□ 1.32
LSM4-201ENST00000252816 C16orf96A6NNT2 1141 aa23.29■■□□□ 1.32
LSM4-201ENST00000252816 AKR1B15C9JRZ8 316 aaPredicted RBP23.29■■□□□ 1.32
LSM4-201ENST00000252816 H0Y8X5 98 aa23.29■■□□□ 1.32
LSM4-201ENST00000252816 DFFAO00273 331 aa23.29■■□□□ 1.32
LSM4-201ENST00000252816 INSIG1O15503 277 aa23.29■■□□□ 1.32
LSM4-201ENST00000252816 IGSF6O95976 241 aa23.29■■□□□ 1.32
LSM4-201ENST00000252816 TMEM253P0C7T8 217 aa23.29■■□□□ 1.32
LSM4-201ENST00000252816 PRLRP16471 622 aa23.29■■□□□ 1.32
LSM4-201ENST00000252816 NUDT1P36639 197 aa23.29■■□□□ 1.32
LSM4-201ENST00000252816 ARL4AP40617 200 aa23.29■■□□□ 1.32
LSM4-201ENST00000252816 C21orf59P57076 290 aa23.29■■□□□ 1.32
LSM4-201ENST00000252816 FAM193AP78312 1265 aa23.29■■□□□ 1.32
LSM4-201ENST00000252816 SETMARQ53H47 684 aaPredicted RBP23.29■■□□□ 1.32
LSM4-201ENST00000252816 ZNF805Q5CZA5 627 aa23.29■■□□□ 1.32
LSM4-201ENST00000252816 SEL1L3Q68CR1 1132 aa23.29■■□□□ 1.32
LSM4-201ENST00000252816 FBXL19Q6PCT2 694 aa23.29■■□□□ 1.32
LSM4-201ENST00000252816 HORMAD1Q86X24 394 aa23.29■■□□□ 1.32
LSM4-201ENST00000252816 CNGA4Q8IV77 575 aa23.29■■□□□ 1.32
LSM4-201ENST00000252816 TSC1Q92574 1164 aa23.29■■□□□ 1.32
LSM4-201ENST00000252816 CCDC42Q96M95 316 aa23.29■■□□□ 1.32
LSM4-201ENST00000252816 SLC32A1Q9H598 525 aa23.29■■□□□ 1.32
LSM4-201ENST00000252816 CA5BQ9Y2D0 317 aa23.29■■□□□ 1.32
LSM4-201ENST00000252816 FADS3Q9Y5Q0 445 aa23.29■■□□□ 1.32
LSM4-201ENST00000252816 PROSCO94903 275 aa23.28■■□□□ 1.32
LSM4-201ENST00000252816 PCDH8O95206 1070 aa23.28■■□□□ 1.32
LSM4-201ENST00000252816 ABL2P42684 1182 aa23.28■■□□□ 1.32
LSM4-201ENST00000252816 SSR1P43307 286 aaKnown RBP23.28■■□□□ 1.32
LSM4-201ENST00000252816 ZNF423Q2M1K9 1284 aa23.28■■□□□ 1.32
LSM4-201ENST00000252816 PRAMEF14Q5SWL7 426 aa23.28■■□□□ 1.32
LSM4-201ENST00000252816 KLHL32Q96NJ5 620 aa23.28■■□□□ 1.32
LSM4-201ENST00000252816 OSBPL1AQ9BXW6 950 aa23.28■■□□□ 1.32
LSM4-201ENST00000252816 TMEM131Q92545 1883 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms